RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 OR8B12Q8NGG6 310 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 NICN1Q9BSH3 213 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 PRRG4Q9BZD6 226 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 GLTPQ9NZD2 209 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 CYB5R1Q9UHQ9 305 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 SLC17A2O00624 439 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 RAB40ALP0C0E4 278 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 POU3F2P20265 443 aaPredicted RBP11.26□□□□□ -0.61
SCAF11-209ENST00000547018 RGS19P49795 217 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 SUMO3P55854 103 aaPredicted RBP11.26□□□□□ -0.61
SCAF11-209ENST00000547018 ATXN7L3Q14CW9 347 aaPredicted RBP11.26□□□□□ -0.61
SCAF11-209ENST00000547018 PDCD1Q15116 288 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 GSG1Q2KHT4 349 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 ZNF454Q8N9F8 522 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 RAB40AQ8WXH6 277 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 PROK2Q9HC23 129 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 MOV10Q9HCE1 1003 aaKnown RBP11.26□□□□□ -0.61
SCAF11-209ENST00000547018 ING4Q9UNL4 249 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 ESPL1Q14674 2120 aa11.25□□□□□ -0.61
SCAF11-209ENST00000547018 KIAA2026Q5HYC2 2103 aa11.25□□□□□ -0.61
SCAF11-209ENST00000547018 SPTBN4Q9H254 2564 aa11.25□□□□□ -0.61
SCAF11-209ENST00000547018 PEX14O75381 377 aa11.25□□□□□ -0.61
SCAF11-209ENST00000547018 ZNF205O95201 554 aa11.25□□□□□ -0.61
SCAF11-209ENST00000547018 HRGP04196 525 aa11.25□□□□□ -0.61
SCAF11-209ENST00000547018 EIF1P41567 113 aaKnown RBP11.25□□□□□ -0.61
SCAF11-209ENST00000547018 SUCLG1P53597 346 aaKnown RBP11.25□□□□□ -0.61
SCAF11-209ENST00000547018 CDK10Q15131 360 aa11.25□□□□□ -0.61
SCAF11-209ENST00000547018 ABHD17BQ5VST6 288 aa11.25□□□□□ -0.61
SCAF11-209ENST00000547018 C5orf46Q6UWT4 87 aa11.25□□□□□ -0.61
SCAF11-209ENST00000547018 OR11H4Q8NGC9 324 aa11.25□□□□□ -0.61
SCAF11-209ENST00000547018 CASTOR1Q8WTX7 329 aa11.25□□□□□ -0.61
SCAF11-209ENST00000547018 RNF133Q8WVZ7 376 aa11.25□□□□□ -0.61
SCAF11-209ENST00000547018 SNAPC3Q92966 411 aa11.25□□□□□ -0.61
SCAF11-209ENST00000547018 EDEM2Q9BV94 578 aa11.25□□□□□ -0.61
SCAF11-209ENST00000547018 DPCDQ9BVM2 203 aaPredicted RBP11.25□□□□□ -0.61
SCAF11-209ENST00000547018 WDR54Q9H977 334 aa11.25□□□□□ -0.61
SCAF11-209ENST00000547018 FBXO4Q9UKT5 387 aa11.25□□□□□ -0.61
SCAF11-209ENST00000547018 AKAP13Q12802 2813 aa11.25□□□□□ -0.61
SCAF11-209ENST00000547018 C9orf172C9J069 976 aa11.25□□□□□ -0.61
SCAF11-209ENST00000547018 YKT6O15498 198 aa11.25□□□□□ -0.61
SCAF11-209ENST00000547018 CRTAPO75718 401 aaPredicted RBP11.25□□□□□ -0.61
SCAF11-209ENST00000547018 RAF1P04049 648 aa11.25□□□□□ -0.61
SCAF11-209ENST00000547018 GAAP10253 952 aa11.25□□□□□ -0.61
SCAF11-209ENST00000547018 DNASE1P24855 282 aa11.25□□□□□ -0.61
SCAF11-209ENST00000547018 BDKRB2P30411 391 aa11.25□□□□□ -0.61
SCAF11-209ENST00000547018 MLF1P58340 268 aa11.25□□□□□ -0.61
SCAF11-209ENST00000547018 AP3S2P59780 193 aa11.25□□□□□ -0.61
SCAF11-209ENST00000547018 PLGLB1Q02325 96 aa11.25□□□□□ -0.61
SCAF11-209ENST00000547018 ROM1Q03395 351 aa11.25□□□□□ -0.61
SCAF11-209ENST00000547018 TEX30Q5JUR7 227 aa11.25□□□□□ -0.61
SCAF11-209ENST00000547018 THOC7Q6I9Y2 204 aaKnown RBP11.25□□□□□ -0.61
SCAF11-209ENST00000547018 GALNTL5Q7Z4T8 443 aa11.25□□□□□ -0.61
SCAF11-209ENST00000547018 TMEM104Q8NE00 496 aa11.25□□□□□ -0.61
SCAF11-209ENST00000547018 HAVCR2Q8TDQ0 301 aa11.25□□□□□ -0.61
SCAF11-209ENST00000547018 SLC26A1Q9H2B4 701 aa11.25□□□□□ -0.61
SCAF11-209ENST00000547018 CALHM2Q9HA72 323 aa11.25□□□□□ -0.61
SCAF11-209ENST00000547018 ANKRD11Q6UB99 2663 aaPredicted RBP11.25□□□□□ -0.61
SCAF11-209ENST00000547018 ZNF292O60281 2723 aa11.24□□□□□ -0.61
SCAF11-209ENST00000547018 IGHV3-64DA0A0J9YX35 117 aa11.24□□□□□ -0.61
SCAF11-209ENST00000547018 A0A1W2PNU3 283 aaPredicted RBP11.24□□□□□ -0.61
SCAF11-209ENST00000547018 LCATP04180 440 aa11.24□□□□□ -0.61
SCAF11-209ENST00000547018 PI3P19957 117 aa11.24□□□□□ -0.61
SCAF11-209ENST00000547018 PTBP1P26599 531 aaKnown RBP eCLIP11.24□□□□□ -0.612e-7■■■■■ 37
SCAF11-209ENST00000547018 ZNF93P35789 620 aaPredicted RBP11.24□□□□□ -0.61
SCAF11-209ENST00000547018 HTR2BP41595 481 aa11.24□□□□□ -0.61
SCAF11-209ENST00000547018 OR3A4PP47883 348 aa11.24□□□□□ -0.61
SCAF11-209ENST00000547018 GZMKP49863 264 aa11.24□□□□□ -0.61
SCAF11-209ENST00000547018 PSMA6P60900 246 aaKnown RBP11.24□□□□□ -0.61
SCAF11-209ENST00000547018 BRICD5Q6PL45 260 aa11.24□□□□□ -0.61
SCAF11-209ENST00000547018 PHYHIPQ92561 330 aa11.24□□□□□ -0.61
SCAF11-209ENST00000547018 MNTQ99583 582 aa11.24□□□□□ -0.61
SCAF11-209ENST00000547018 ZNF878C9JN71 531 aa11.24□□□□□ -0.61
SCAF11-209ENST00000547018 XRCC3O43542 346 aa11.24□□□□□ -0.61
SCAF11-209ENST00000547018 RAB3DO95716 219 aa11.24□□□□□ -0.61
SCAF11-209ENST00000547018 IGF2P01344 180 aa11.24□□□□□ -0.61
SCAF11-209ENST00000547018 ANXA3P12429 323 aa11.24□□□□□ -0.61
SCAF11-209ENST00000547018 SERPINA2P20848 420 aa11.24□□□□□ -0.61
SCAF11-209ENST00000547018 CLDN15P56746 228 aa11.24□□□□□ -0.61
SCAF11-209ENST00000547018 RIN1Q13671 783 aa11.24□□□□□ -0.61
SCAF11-209ENST00000547018 HES3Q5TGS1 186 aa11.24□□□□□ -0.61
SCAF11-209ENST00000547018 GLIPR1L1Q6UWM5 242 aa11.24□□□□□ -0.61
SCAF11-209ENST00000547018 BTN2A1Q7KYR7 527 aa11.24□□□□□ -0.61
SCAF11-209ENST00000547018 GALNT16Q8N428 558 aa11.24□□□□□ -0.61
SCAF11-209ENST00000547018 OR9K2Q8NGE7 335 aa11.24□□□□□ -0.61
SCAF11-209ENST00000547018 SIGLEC12Q96PQ1 595 aa11.24□□□□□ -0.61
SCAF11-209ENST00000547018 SLC6A7Q99884 636 aa11.24□□□□□ -0.61
SCAF11-209ENST00000547018 MRPL13Q9BYD1 178 aaKnown RBP11.24□□□□□ -0.61
SCAF11-209ENST00000547018 ZNF700Q9H0M5 742 aa11.24□□□□□ -0.61
SCAF11-209ENST00000547018 CA10Q9NS85 328 aa11.24□□□□□ -0.61
SCAF11-209ENST00000547018 ZNF275Q9NSD4 429 aaPredicted RBP11.24□□□□□ -0.61
SCAF11-209ENST00000547018 NPAP1Q9NZP6 1156 aa11.24□□□□□ -0.61
SCAF11-209ENST00000547018 FAM230AA0A1W2PPH8 454 aa11.24□□□□□ -0.61
SCAF11-209ENST00000547018 AQP7P3A6NL99 342 aa11.24□□□□□ -0.61
SCAF11-209ENST00000547018 CYB5AP00167 134 aa11.24□□□□□ -0.61
SCAF11-209ENST00000547018 RAB3AP20336 220 aa11.24□□□□□ -0.61
SCAF11-209ENST00000547018 NTF4P34130 210 aa11.24□□□□□ -0.61
SCAF11-209ENST00000547018 DSCR4P56555 118 aaPredicted RBP11.24□□□□□ -0.61
SCAF11-209ENST00000547018 SRSF6Q13247 344 aaKnown RBP11.24□□□□□ -0.61
SCAF11-209ENST00000547018 NKAPLQ5M9Q1 402 aa11.24□□□□□ -0.61
SCAF11-209ENST00000547018 GTPBP8Q8N3Z3 284 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms