RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 SNAP29O95721 258 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 IGHV3-9P01782 118 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 IGFBP1P08833 259 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 CST2P09228 141 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 HKR1P10072 659 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 CTLA4P16410 223 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 ZNF823P16415 610 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 SPI1P17947 270 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 EDNRAP25101 427 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 PTAFRP25105 342 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 FMO3P31513 532 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 ARR3P36575 388 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 NR1H2P55055 460 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 SNRPGP62308 76 aaKnown RBP4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 CSNK2BP67870 215 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 ARF1P84077 181 aaKnown RBP4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 SCRN3Q0VDG4 424 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 CRMP1Q14194 572 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 PPA1Q15181 289 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 LRRC36Q1X8D7 754 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 TBRG1Q3YBR2 411 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 TEX30Q5JUR7 227 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 PHYHD1Q5SRE7 291 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 LCN1P1Q5VSP4 162 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 TMEM236Q5W0B7 351 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 LIN54Q6MZP7 749 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 TMEM53Q6P2H8 277 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 LINGO2Q7L985 606 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 SHFQ7M4L6 423 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 SLC16A14Q7RTX9 510 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 EGFL6Q8IUX8 553 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 CPOQ8IVL8 374 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 C1orf174Q8IYL3 243 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 OR6V1Q8N148 313 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 GALNT4Q8N4A0 578 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 SLC22A24Q8N4F4 322 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 IQCF1Q8N6M8 205 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 SDR9C7Q8NEX9 313 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 TMEM163Q8TC26 289 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 TMEM171Q8WVE6 324 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 PTP4A1Q93096 173 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 RADILQ96JH8 1075 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 MED18Q9BUE0 208 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 ALG8Q9BVK2 526 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 ACTR6Q9GZN1 396 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 MARCH7Q9H992 704 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 RPRD1BQ9NQG5 326 aaKnown RBP4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 POLE4Q9NR33 117 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 SLC17A5Q9NRA2 495 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 KCNN3Q9UGI6 736 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 WARS2Q9UGM6 360 aaKnown RBP4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 ATPIF1Q9UII2 106 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 UGT2A1Q9Y4X1 527 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 PCDHGB1Q9Y5G3 927 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 CENPEQ02224 2701 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 IGKV1D-43A0A0B4J1Z2 117 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 IRGMA1A4Y4 181 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 H7C1C5 153 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 PHYHO14832 338 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 LYZL6O75951 148 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 SLC2A10O95528 541 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 RAB36O95755 333 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 IGKV3-15P01624 115 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 COX5BP10606 129 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 B4GALT1P15291 398 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 CBR1P16152 277 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 SLC2A5P22732 501 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 CRYGSP22914 178 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 EPHA2P29317 976 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 HTR1FP30939 366 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 POLR2IP36954 125 aaKnown RBP4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 CAPGP40121 348 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 LCN6P62502 163 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 ADARB1P78563 741 aaKnown RBP4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 FMODQ06828 376 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 ECH1Q13011 328 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 AQP6Q13520 282 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 GGTLC2Q14390 218 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 DAZAP2Q15038 168 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 SNCBQ16143 134 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 SGCAQ16586 387 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 PCK2Q16822 640 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 GSG1Q2KHT4 349 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 BEX5Q5H9J7 111 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 LINC01590Q5TEZ4 76 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 AADACL4Q5VUY2 407 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 ZNF691Q5VV52 312 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 PLBD1Q6P4A8 553 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 UNQ6126/PRO20091Q6UXV3 157 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 Q6ZNX1 250 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 MEPCEQ7L2J0 689 aaKnown RBP4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 WDFY1Q8IWB7 410 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 IZUMO1Q8IYV9 350 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 C8orf59Q8N0T1 100 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 TCEANCQ8N8B7 351 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 WDR31Q8NA23 367 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 CYB561A3Q8NBI2 242 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 PROKR2Q8NFJ6 384 aa4.76□□□□□ -1.65
HMGB1P44-201ENST00000508597 GJC3Q8NFK1 279 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 173.8 ms