RNA–Protein interactions for RNA: ENST00000483821.1

RXRB-205, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-205ENST00000483821 HOXC12P31275 282 aa11.72□□□□□ -0.53
RXRB-205ENST00000483821 TNFSF8P32971 234 aa11.72□□□□□ -0.53
RXRB-205ENST00000483821 TDGF1P3P51864 188 aa11.72□□□□□ -0.53
RXRB-205ENST00000483821 CAPZA1P52907 286 aa11.72□□□□□ -0.53
RXRB-205ENST00000483821 UBE2NP61088 152 aaKnown RBP11.72□□□□□ -0.53
RXRB-205ENST00000483821 KRTAP27-1Q3LI81 207 aa11.72□□□□□ -0.53
RXRB-205ENST00000483821 C1QTNF12Q5T7M4 302 aa11.72□□□□□ -0.53
RXRB-205ENST00000483821 GLT8D1Q68CQ7 371 aa11.72□□□□□ -0.53
RXRB-205ENST00000483821 C16orf87Q6PH81 154 aa11.72□□□□□ -0.53
RXRB-205ENST00000483821 BEND4Q6ZU67 534 aa11.72□□□□□ -0.53
RXRB-205ENST00000483821 PGAP1Q75T13 922 aa11.72□□□□□ -0.53
RXRB-205ENST00000483821 PARP16Q8N5Y8 322 aa11.72□□□□□ -0.53
RXRB-205ENST00000483821 OR8B12Q8NGG6 310 aa11.72□□□□□ -0.53
RXRB-205ENST00000483821 OR10AC1Q8NH08 325 aa11.72□□□□□ -0.53
RXRB-205ENST00000483821 AKR7LQ8NHP1 331 aa11.72□□□□□ -0.53
RXRB-205ENST00000483821 OR51E1Q8TCB6 317 aa11.72□□□□□ -0.53
RXRB-205ENST00000483821 FOXRED1Q96CU9 486 aaPredicted RBP11.72□□□□□ -0.53
RXRB-205ENST00000483821 C10orf35Q96D05 121 aa11.72□□□□□ -0.53
RXRB-205ENST00000483821 BOD1Q96IK1 185 aa11.72□□□□□ -0.53
RXRB-205ENST00000483821 CMTM3Q96MX0 182 aa11.72□□□□□ -0.53
RXRB-205ENST00000483821 SFXN3Q9BWM7 321 aa11.72□□□□□ -0.53
RXRB-205ENST00000483821 SLC25A18Q9H1K4 315 aa11.72□□□□□ -0.53
RXRB-205ENST00000483821 MOV10Q9HCE1 1003 aaKnown RBP11.72□□□□□ -0.53
RXRB-205ENST00000483821 COMMD3Q9UBI1 195 aa11.72□□□□□ -0.53
RXRB-205ENST00000483821 DAPK2Q9UIK4 370 aa11.72□□□□□ -0.53
RXRB-205ENST00000483821 AK6Q9Y3D8 172 aaKnown RBP11.72□□□□□ -0.53
RXRB-205ENST00000483821 CACNA1CQ13936 2221 aa11.71□□□□□ -0.53
RXRB-205ENST00000483821 SPTBN4Q9H254 2564 aa11.71□□□□□ -0.53
RXRB-205ENST00000483821 LOC390937A0A1W2PQ73 354 aa11.71□□□□□ -0.53
RXRB-205ENST00000483821 SMIM30A4D0T7 59 aa11.71□□□□□ -0.53
RXRB-205ENST00000483821 IFITM5A6NNB3 132 aa11.71□□□□□ -0.53
RXRB-205ENST00000483821 DHRS7CA6NNS2 312 aa11.71□□□□□ -0.53
RXRB-205ENST00000483821 AIPO00170 330 aa11.71□□□□□ -0.53
RXRB-205ENST00000483821 TBX1O43435 398 aa11.71□□□□□ -0.53
RXRB-205ENST00000483821 LCATP04180 440 aa11.71□□□□□ -0.53
RXRB-205ENST00000483821 ITGA5P08648 1049 aa11.71□□□□□ -0.53
RXRB-205ENST00000483821 BMP4P12644 408 aa11.71□□□□□ -0.53
RXRB-205ENST00000483821 EDN3P14138 238 aa11.71□□□□□ -0.53
RXRB-205ENST00000483821 PTBP1P26599 531 aaKnown RBP eCLIP11.71□□□□□ -0.53
RXRB-205ENST00000483821 TALDO1P37837 337 aa11.71□□□□□ -0.53
RXRB-205ENST00000483821 GNALP38405 381 aa11.71□□□□□ -0.53
RXRB-205ENST00000483821 PPP5CP53041 499 aa11.71□□□□□ -0.53
RXRB-205ENST00000483821 CAV3P56539 151 aa11.71□□□□□ -0.53
RXRB-205ENST00000483821 SCAND1P57086 179 aa11.71□□□□□ -0.53
RXRB-205ENST00000483821 RAB1AP62820 205 aa11.71□□□□□ -0.53
RXRB-205ENST00000483821 GSG1Q2KHT4 349 aa11.71□□□□□ -0.53
RXRB-205ENST00000483821 TBRG1Q3YBR2 411 aa11.71□□□□□ -0.53
RXRB-205ENST00000483821 CEP78Q5JTW2 689 aa11.71□□□□□ -0.53
RXRB-205ENST00000483821 METAP1DQ6UB28 335 aaPredicted RBP11.71□□□□□ -0.53
RXRB-205ENST00000483821 PRSS45Q7RTY3 260 aa11.71□□□□□ -0.53
RXRB-205ENST00000483821 LRRTM1Q86UE6 522 aa11.71□□□□□ -0.53
RXRB-205ENST00000483821 CCDC190Q86UF4 302 aa11.71□□□□□ -0.53
RXRB-205ENST00000483821 NKAIN3Q8N8D7 197 aa11.71□□□□□ -0.53
RXRB-205ENST00000483821 KDF1Q8NAX2 398 aaPredicted RBP11.71□□□□□ -0.53
RXRB-205ENST00000483821 OR51A4Q8NGJ6 313 aa11.71□□□□□ -0.53
RXRB-205ENST00000483821 ZNF671Q8TAW3 534 aa11.71□□□□□ -0.53
RXRB-205ENST00000483821 AKAP1Q92667 903 aaKnown RBP eCLIP11.71□□□□□ -0.53
RXRB-205ENST00000483821 SNRNP40Q96DI7 357 aaKnown RBP11.71□□□□□ -0.53
RXRB-205ENST00000483821 PRORYQ9H606 182 aa11.71□□□□□ -0.53
RXRB-205ENST00000483821 PLEKHA1Q9HB21 404 aa11.71□□□□□ -0.53
RXRB-205ENST00000483821 NEK6Q9HC98 313 aa11.71□□□□□ -0.53
RXRB-205ENST00000483821 ABCB9Q9NP78 766 aa11.71□□□□□ -0.53
RXRB-205ENST00000483821 OBP2BQ9NPH6 170 aa11.71□□□□□ -0.53
RXRB-205ENST00000483821 GPR84Q9NQS5 396 aa11.71□□□□□ -0.53
RXRB-205ENST00000483821 RABL2AQ9UBK7 228 aaPredicted RBP11.71□□□□□ -0.53
RXRB-205ENST00000483821 RABL2BQ9UNT1 228 aa11.71□□□□□ -0.53
RXRB-205ENST00000483821 A0A0G2JK05 382 aa11.7□□□□□ -0.54
RXRB-205ENST00000483821 A0A1B0GTI1 187 aa11.7□□□□□ -0.54
RXRB-205ENST00000483821 XRCC2O43543 280 aa11.7□□□□□ -0.54
RXRB-205ENST00000483821 IL18BPO95998 194 aa11.7□□□□□ -0.54
RXRB-205ENST00000483821 HLA-HP01893 362 aa11.7□□□□□ -0.54
RXRB-205ENST00000483821 SERPINA5P05154 406 aa11.7□□□□□ -0.54
RXRB-205ENST00000483821 PATE4P0C8F1 98 aa11.7□□□□□ -0.54
RXRB-205ENST00000483821 CALCBP10092 127 aa11.7□□□□□ -0.54
RXRB-205ENST00000483821 SLC2A1P11166 492 aa11.7□□□□□ -0.54
RXRB-205ENST00000483821 CEACAM8P31997 349 aaPredicted RBP11.7□□□□□ -0.54
RXRB-205ENST00000483821 OPRM1P35372 400 aa11.7□□□□□ -0.54
RXRB-205ENST00000483821 APLNRP35414 380 aa11.7□□□□□ -0.54
RXRB-205ENST00000483821 MAGEB1P43366 347 aa11.7□□□□□ -0.54
RXRB-205ENST00000483821 CASP6P55212 293 aa11.7□□□□□ -0.54
RXRB-205ENST00000483821 OR10A3P58181 314 aa11.7□□□□□ -0.54
RXRB-205ENST00000483821 MRPL49Q13405 166 aaKnown RBP11.7□□□□□ -0.54
RXRB-205ENST00000483821 RSPO1Q2MKA7 263 aaPredicted RBP11.7□□□□□ -0.54
RXRB-205ENST00000483821 RTL6Q6ICC9 239 aa11.7□□□□□ -0.54
RXRB-205ENST00000483821 BTLAQ7Z6A9 289 aa11.7□□□□□ -0.54
RXRB-205ENST00000483821 CDH26Q8IXH8 852 aa11.7□□□□□ -0.54
RXRB-205ENST00000483821 MFSD4AQ8N468 514 aa11.7□□□□□ -0.54
RXRB-205ENST00000483821 C17orf78Q8N4C9 275 aa11.7□□□□□ -0.54
RXRB-205ENST00000483821 PLPP7Q8NBV4 271 aa11.7□□□□□ -0.54
RXRB-205ENST00000483821 OR1J2Q8NGS2 313 aa11.7□□□□□ -0.54
RXRB-205ENST00000483821 FGGYQ96C11 551 aa11.7□□□□□ -0.54
RXRB-205ENST00000483821 STARD4Q96DR4 205 aa11.7□□□□□ -0.54
RXRB-205ENST00000483821 DIRAS2Q96HU8 199 aa11.7□□□□□ -0.54
RXRB-205ENST00000483821 PIGMQ9H3S5 423 aa11.7□□□□□ -0.54
RXRB-205ENST00000483821 ZNF835Q9Y2P0 537 aa11.7□□□□□ -0.54
RXRB-205ENST00000483821 FAM215AQ9Y5M1 114 aa11.7□□□□□ -0.54
RXRB-205ENST00000483821 PHF3Q92576 2039 aaKnown RBP11.7□□□□□ -0.54
RXRB-205ENST00000483821 WDFY3Q8IZQ1 3526 aa11.7□□□□□ -0.54
RXRB-205ENST00000483821 PTPRQQ9UMZ3 2332 aa11.69□□□□□ -0.54
RXRB-205ENST00000483821 TRAV8-7A0A075B6U6 113 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms