RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 OPN4Q9UHM6 478 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 CYB5R1Q9UHQ9 305 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 BTNL2Q9UIR0 455 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 MGAT4AQ9UM21 535 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 AP3M1Q9Y2T2 418 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 ARL2BPQ9Y2Y0 163 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 ACOT9Q9Y305 439 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 GOLT1BQ9Y3E0 138 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 FSIP2Q5CZC0 6907 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 BRWD1Q9NSI6 2320 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 ZNF532Q9HCE3 1301 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 FANCIQ9NVI1 1328 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 ANKRD31Q8N7Z5 1873 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 ALPK3Q96L96 1907 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 A0A1B0GU03 582 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 LOC105371267A0A1B0GV96 52 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 GNG14A0A1W2PPG7 69 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 SLC5A10A0PJK1 596 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 VPS37CA5D8V6 355 aaPredicted RBP2.43□□□□□ -2.02
HMGN4-202ENST00000477243 TVP23AA6NH52 213 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 GJE1A6NN92 205 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 TMEM238C9JI98 176 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.43□□□□□ -2.02
HMGN4-202ENST00000477243 SURF4O15260 269 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 MAGEB4O15481 346 aaPredicted RBP2.43□□□□□ -2.02
HMGN4-202ENST00000477243 CTSVO60911 334 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 SRP72O76094 671 aaKnown RBP2.43□□□□□ -2.02
HMGN4-202ENST00000477243 TDP2O95551 362 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 KRT75O95678 551 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 PAK4O96013 591 aaPredicted RBP2.43□□□□□ -2.02
HMGN4-202ENST00000477243 IGHV2-5P01817 119 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 EDN1P05305 212 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 UCHL3P15374 230 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 ITGA2P17301 1181 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 ATF6P18850 670 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 M6PRP20645 277 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 SLC2A5P22732 501 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 G0S2P27469 103 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 ALDH3A1P30838 453 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 CD79BP40259 229 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 CDK9P50750 372 aaKnown RBP2.43□□□□□ -2.02
HMGN4-202ENST00000477243 ATP4BP51164 291 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 CRYBA2P53672 197 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 RHOAP61586 193 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 RPL31P62899 125 aaKnown RBP2.43□□□□□ -2.02
HMGN4-202ENST00000477243 ZNF91Q05481 1191 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 ZNF33BQ06732 778 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 SMARCB1Q12824 385 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 STX4Q12846 297 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 ECH1Q13011 328 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 PTGES3Q15185 160 aaKnown RBP2.43□□□□□ -2.02
HMGN4-202ENST00000477243 HLFQ16534 295 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 CYP51A1Q16850 503 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 VMACQ2NL98 169 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 TIGITQ495A1 244 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 UNC50Q53HI1 259 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 TIMM23BQ5SRD1 257 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 CPTPQ5TA50 214 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 N4BP2L1Q5TBK1 243 aaPredicted RBP2.43□□□□□ -2.02
HMGN4-202ENST00000477243 METTL21CQ5VZV1 264 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 PVRIGQ6DKI7 326 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 OR52E8Q6IFG1 317 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 ANKRD26P1Q6NSI1 321 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 C3orf33Q6P1S2 294 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 TMEM207Q6UWW9 146 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 WDR82Q6UXN9 313 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 APOOLQ6UXV4 268 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 Q6ZSR9 355 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 CHMP1BQ7LBR1 199 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 PRSS48Q7RTY5 328 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 LIMS2Q7Z4I7 341 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 CA13Q8N1Q1 262 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 RIBC1Q8N443 379 aaPredicted RBP2.43□□□□□ -2.02
HMGN4-202ENST00000477243 PRELID2Q8N945 189 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 DUSP18Q8NEJ0 188 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 OR4K2Q8NGD2 314 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 OR2D3Q8NGH3 330 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 OR2G2Q8NGZ5 317 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 SYNPRQ8TBG9 265 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 ZNF502Q8TBZ5 544 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 SFXN5Q8TD22 340 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 MCOLN3Q8TDD5 553 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 DTD1Q8TEA8 209 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 DOK4Q8TEW6 326 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 APH1BQ8WW43 257 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 ZNRF4Q8WWF5 429 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 NELFBQ8WX92 580 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 SLC35B4Q969S0 331 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 WDR34Q96EX3 536 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 WBP1Q96G27 269 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 PPP1R36Q96LQ0 422 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 ZNF385AQ96PM9 386 aaKnown RBP2.43□□□□□ -2.02
HMGN4-202ENST00000477243 ALKBH3Q96Q83 286 aaPredicted RBP2.43□□□□□ -2.02
HMGN4-202ENST00000477243 OR8B4Q96RC9 309 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 FOXC2Q99958 501 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 APOL4Q9BPW4 351 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 FAIM2Q9BWQ8 316 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 BEX2Q9BXY8 128 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 BARHL1Q9BZE3 327 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 UBXN6Q9BZV1 441 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms