RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 BAALCQ8WXS3 180 aa4.23□□□□□ -1.73
COPS3-205ENST00000463097 UCN3Q969E3 161 aa4.23□□□□□ -1.73
COPS3-205ENST00000463097 RNF170Q96K19 258 aa4.23□□□□□ -1.73
COPS3-205ENST00000463097 C8orf76Q96K31 380 aa4.23□□□□□ -1.73
COPS3-205ENST00000463097 CALN1Q9BXU9 219 aa4.23□□□□□ -1.73
COPS3-205ENST00000463097 MAP1LC3CQ9BXW4 147 aa4.23□□□□□ -1.73
COPS3-205ENST00000463097 KRTAP4-9Q9BYQ8 210 aa4.23□□□□□ -1.73
COPS3-205ENST00000463097 SPACA1Q9HBV2 294 aa4.23□□□□□ -1.73
COPS3-205ENST00000463097 CTSFQ9UBX1 484 aa4.23□□□□□ -1.73
COPS3-205ENST00000463097 ZNF229Q9UJW7 825 aa4.23□□□□□ -1.73
COPS3-205ENST00000463097 RPL26L1Q9UNX3 145 aaKnown RBP4.23□□□□□ -1.73
COPS3-205ENST00000463097 C15orf41Q9Y2V0 281 aa4.23□□□□□ -1.73
COPS3-205ENST00000463097 RLFQ13129 1914 aa4.23□□□□□ -1.73
COPS3-205ENST00000463097 CACNA1FO60840 1977 aa4.22□□□□□ -1.73
COPS3-205ENST00000463097 HIDE1A8MVS5 230 aa4.22□□□□□ -1.73
COPS3-205ENST00000463097 H3BN98 237 aa4.22□□□□□ -1.73
COPS3-205ENST00000463097 CRLF1O75462 422 aa4.22□□□□□ -1.73
COPS3-205ENST00000463097 CSNK2A2P19784 350 aaPredicted RBP4.22□□□□□ -1.73
COPS3-205ENST00000463097 HRH1P35367 487 aa4.22□□□□□ -1.73
COPS3-205ENST00000463097 SPAM1P38567 509 aa4.22□□□□□ -1.73
COPS3-205ENST00000463097 CSNK1DP48730 415 aa4.22□□□□□ -1.73
COPS3-205ENST00000463097 RND2P52198 227 aa4.22□□□□□ -1.73
COPS3-205ENST00000463097 RIPPLY3P57055 190 aa4.22□□□□□ -1.73
COPS3-205ENST00000463097 PRPS1P60891 318 aa4.22□□□□□ -1.73
COPS3-205ENST00000463097 ITGB3BPQ13352 177 aaPredicted RBP4.22□□□□□ -1.73
COPS3-205ENST00000463097 UNC119Q13432 240 aa4.22□□□□□ -1.73
COPS3-205ENST00000463097 NSDHLQ15738 373 aa4.22□□□□□ -1.73
COPS3-205ENST00000463097 USF2Q15853 346 aaPredicted RBP4.22□□□□□ -1.73
COPS3-205ENST00000463097 TTMPQ5BVD1 217 aa4.22□□□□□ -1.73
COPS3-205ENST00000463097 GFI1BQ5VTD9 330 aa4.22□□□□□ -1.73
COPS3-205ENST00000463097 C12orf54Q6X4T0 127 aa4.22□□□□□ -1.73
COPS3-205ENST00000463097 NDUFAF7Q7L592 441 aa4.22□□□□□ -1.73
COPS3-205ENST00000463097 CBLN2Q8IUK8 224 aa4.22□□□□□ -1.73
COPS3-205ENST00000463097 RNF10Q8N5U6 811 aaKnown RBP4.22□□□□□ -1.73
COPS3-205ENST00000463097 MAPK1IP1LQ8NDC0 245 aa4.22□□□□□ -1.73
COPS3-205ENST00000463097 ACER1Q8TDN7 264 aa4.22□□□□□ -1.73
COPS3-205ENST00000463097 MARC2Q969Z3 335 aa4.22□□□□□ -1.73
COPS3-205ENST00000463097 FAM122AQ96E09 287 aa4.22□□□□□ -1.73
COPS3-205ENST00000463097 MICU1Q9BPX6 476 aa4.22□□□□□ -1.73
COPS3-205ENST00000463097 OR11A1Q9GZK7 315 aa4.22□□□□□ -1.73
COPS3-205ENST00000463097 GFRA4Q9GZZ7 299 aa4.22□□□□□ -1.73
COPS3-205ENST00000463097 ARMC7Q9H6L4 198 aa4.22□□□□□ -1.73
COPS3-205ENST00000463097 UBE2ZQ9H832 354 aaPredicted RBP4.22□□□□□ -1.73
COPS3-205ENST00000463097 TMBIM4Q9HC24 238 aa4.22□□□□□ -1.73
COPS3-205ENST00000463097 CCL28Q9NRJ3 127 aa4.22□□□□□ -1.73
COPS3-205ENST00000463097 ABCB10Q9NRK6 738 aa4.22□□□□□ -1.73
COPS3-205ENST00000463097 NEUROG3Q9Y4Z2 214 aa4.22□□□□□ -1.73
COPS3-205ENST00000463097 LRRC42Q9Y546 428 aa4.22□□□□□ -1.73
COPS3-205ENST00000463097 ABCC12Q96J65 1359 aa4.22□□□□□ -1.73
COPS3-205ENST00000463097 A2ML1A8K2U0 1454 aa4.22□□□□□ -1.73
COPS3-205ENST00000463097 MROH7Q68CQ1 1323 aa4.21□□□□□ -1.73
COPS3-205ENST00000463097 NFAT5O94916 1531 aa4.21□□□□□ -1.73
COPS3-205ENST00000463097 RGPD1P0DJD0 1748 aa4.21□□□□□ -1.73
COPS3-205ENST00000463097 NOTCH4Q99466 2003 aa4.21□□□□□ -1.74
COPS3-205ENST00000463097 A0A0D9SFI3 127 aa4.21□□□□□ -1.74
COPS3-205ENST00000463097 IQCF5A8MTL0 148 aa4.21□□□□□ -1.74
COPS3-205ENST00000463097 ERI3O43414 337 aaKnown RBP4.21□□□□□ -1.74
COPS3-205ENST00000463097 VAPBO95292 243 aa4.21□□□□□ -1.74
COPS3-205ENST00000463097 LCA5LO95447 670 aa4.21□□□□□ -1.74
COPS3-205ENST00000463097 GYPCP04921 128 aa4.21□□□□□ -1.74
COPS3-205ENST00000463097 HOXB6P17509 224 aaKnown RBP4.21□□□□□ -1.74
COPS3-205ENST00000463097 PSMC3P17980 439 aa4.21□□□□□ -1.74
COPS3-205ENST00000463097 RAB4AP20338 218 aa4.21□□□□□ -1.74
COPS3-205ENST00000463097 HTR2CP28335 458 aa4.21□□□□□ -1.74
COPS3-205ENST00000463097 HSPA9P38646 679 aaKnown RBP4.21□□□□□ -1.74
COPS3-205ENST00000463097 FGF8P55075 233 aaPredicted RBP4.21□□□□□ -1.74
COPS3-205ENST00000463097 ORC2Q13416 577 aaPredicted RBP4.21□□□□□ -1.74
COPS3-205ENST00000463097 ANGPT1Q15389 498 aa4.21□□□□□ -1.74
COPS3-205ENST00000463097 ZBED5Q49AG3 693 aa4.21□□□□□ -1.74
COPS3-205ENST00000463097 ANKRD22Q5VYY1 191 aa4.21□□□□□ -1.74
COPS3-205ENST00000463097 NPSR1Q6W5P4 371 aa4.21□□□□□ -1.74
COPS3-205ENST00000463097 TMPRSS11AQ6ZMR5 421 aa4.21□□□□□ -1.74
COPS3-205ENST00000463097 MBOAT2Q6ZWT7 520 aa4.21□□□□□ -1.74
COPS3-205ENST00000463097 COPS6Q7L5N1 327 aa4.21□□□□□ -1.74
COPS3-205ENST00000463097 NOXO1Q8NFA2 376 aa4.21□□□□□ -1.74
COPS3-205ENST00000463097 APH1BQ8WW43 257 aa4.21□□□□□ -1.74
COPS3-205ENST00000463097 RPEQ96AT9 228 aa4.21□□□□□ -1.74
COPS3-205ENST00000463097 LRRC45Q96CN5 670 aa4.21□□□□□ -1.74
COPS3-205ENST00000463097 ZIM3Q96PE6 472 aa4.21□□□□□ -1.74
COPS3-205ENST00000463097 ATOH8Q96SQ7 321 aa4.21□□□□□ -1.74
COPS3-205ENST00000463097 GABARAPL3Q9BY60 117 aa4.21□□□□□ -1.74
COPS3-205ENST00000463097 ANKHQ9HCJ1 492 aa4.21□□□□□ -1.74
COPS3-205ENST00000463097 VNN3Q9NY84 501 aa4.21□□□□□ -1.74
COPS3-205ENST00000463097 STMN3Q9NZ72 180 aa4.21□□□□□ -1.74
COPS3-205ENST00000463097 MTRF1LQ9UGC7 380 aaKnown RBP4.21□□□□□ -1.74
COPS3-205ENST00000463097 RWDD2AQ9UIY3 292 aa4.21□□□□□ -1.74
COPS3-205ENST00000463097 SNX12Q9UMY4 172 aa4.21□□□□□ -1.74
COPS3-205ENST00000463097 PALLDQ8WX93 1383 aa4.21□□□□□ -1.74
COPS3-205ENST00000463097 PLEKHG1Q9ULL1 1385 aa4.21□□□□□ -1.74
COPS3-205ENST00000463097 TCF20Q9UGU0 1960 aaKnown RBP4.21□□□□□ -1.74
COPS3-205ENST00000463097 DLG5Q8TDM6 1919 aa4.21□□□□□ -1.74
COPS3-205ENST00000463097 LRRC37A3O60309 1634 aa4.21□□□□□ -1.74
COPS3-205ENST00000463097 BCL9LQ86UU0 1499 aa4.2□□□□□ -1.74
COPS3-205ENST00000463097 ARHGAP23Q9P227 1491 aa4.2□□□□□ -1.74
COPS3-205ENST00000463097 A0A0G2JN53 185 aa4.2□□□□□ -1.74
COPS3-205ENST00000463097 ZNF233A6NK53 670 aa4.2□□□□□ -1.74
COPS3-205ENST00000463097 NCBP2LA6PVI3 153 aaKnown RBP4.2□□□□□ -1.74
COPS3-205ENST00000463097 E7EWF7 191 aa4.2□□□□□ -1.74
COPS3-205ENST00000463097 KRTAP4-16G5E9R7 235 aaPredicted RBP4.2□□□□□ -1.74
COPS3-205ENST00000463097 H3BNH8 94 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms