RNA–Protein interactions for RNA: ENST00000414670.2

ITGB1-203, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-203ENST00000414670 SRA1Q9HD15 236 aaKnown RBP5.54□□□□□ -1.52
ITGB1-203ENST00000414670 BIN3Q9NQY0 253 aa5.54□□□□□ -1.52
ITGB1-203ENST00000414670 MED29Q9NX70 200 aa5.54□□□□□ -1.52
ITGB1-203ENST00000414670 BABAM2Q9NXR7 383 aa5.54□□□□□ -1.52
ITGB1-203ENST00000414670 VSX1Q9NZR4 365 aaPredicted RBP5.54□□□□□ -1.52
ITGB1-203ENST00000414670 PIPOXQ9P0Z9 390 aa5.54□□□□□ -1.52
ITGB1-203ENST00000414670 MOKQ9UQ07 419 aa5.54□□□□□ -1.52
ITGB1-203ENST00000414670 RAXQ9Y2V3 346 aa5.54□□□□□ -1.52
ITGB1-203ENST00000414670 PTPRBP23467 1997 aa5.54□□□□□ -1.52
ITGB1-203ENST00000414670 WDFY3Q8IZQ1 3526 aa5.54□□□□□ -1.52
ITGB1-203ENST00000414670 ASH1LQ9NR48 2969 aaKnown RBP5.54□□□□□ -1.52
ITGB1-203ENST00000414670 DCHS1Q96JQ0 3298 aa5.54□□□□□ -1.52
ITGB1-203ENST00000414670 CCDC88CQ9P219 2028 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 TRGV5A0A0B4J1U4 118 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 IGHV3-15A0A0B4J1V0 119 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 RAB19A4D1S5 217 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 ZNF726A6NNF4 738 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 FAM171A2A8MVW0 826 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 NPIPA2E9PIF3 369 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 NPIPA3F8WFD2 350 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 L7N2F9 121 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 DCTN6O00399 190 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 SMAD9O15198 467 aaKnown RBP5.53□□□□□ -1.52
ITGB1-203ENST00000414670 PLPP2O43688 288 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 GATCO43716 136 aaKnown RBP5.53□□□□□ -1.52
ITGB1-203ENST00000414670 LANCL1O43813 399 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 RGS9O75916 674 aaPredicted RBP5.53□□□□□ -1.52
ITGB1-203ENST00000414670 ITGB2P05107 769 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 LPLP06858 475 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 MRPL3P09001 348 aaKnown RBP5.53□□□□□ -1.52
ITGB1-203ENST00000414670 CXCL2P19875 107 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 GIFP27352 417 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 CRABP1P29762 137 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 PYCR1P32322 319 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 CENPAP49450 140 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 BIDP55957 195 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 CLDN15P56746 228 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 CLDN18P56856 261 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 TMPRSS3P57727 454 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 AP3S2P59780 193 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 ZP1P60852 638 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 SEC61A1P61619 476 aaKnown RBP5.53□□□□□ -1.52
ITGB1-203ENST00000414670 ACTC1P68032 377 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 ACTA1P68133 377 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 SRYQ05066 204 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 GGTLC2Q14390 218 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 ETFDHQ16134 617 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 TBR1Q16650 682 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 C10orf91Q5T1B1 145 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 LINC01590Q5TEZ4 76 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 EEF1A1P5Q5VTE0 462 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 VASNQ6EMK4 673 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 DNM1P34Q6PK57 102 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 GLDNQ6ZMI3 551 aaPredicted RBP5.53□□□□□ -1.52
ITGB1-203ENST00000414670 DNM1P46Q6ZS02 220 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 TMUB2Q71RG4 321 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 SIAH3Q8IW03 269 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 ACBD7Q8N6N7 88 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 POMGNT2Q8NAT1 580 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 OR9K2Q8NGE7 335 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 OR4D10Q8NGI6 311 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 OR6X1Q8NH79 312 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 ZNRF4Q8WWF5 429 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 HSD17B8Q92506 261 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 TMEM203Q969S6 136 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 CPNE4Q96A23 557 aaPredicted RBP5.53□□□□□ -1.52
ITGB1-203ENST00000414670 PNPLA2Q96AD5 504 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 MRPS24Q96EL2 167 aaKnown RBP5.53□□□□□ -1.52
ITGB1-203ENST00000414670 ADAD1Q96M93 576 aaKnown RBP5.53□□□□□ -1.52
ITGB1-203ENST00000414670 TSSK2Q96PF2 358 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 UCN2Q96RP3 112 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 KCNK17Q96T54 332 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 CNN2Q99439 309 aaKnown RBP5.53□□□□□ -1.52
ITGB1-203ENST00000414670 EMC6Q9BV81 110 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 SF3B5Q9BWJ5 86 aaKnown RBP5.53□□□□□ -1.52
ITGB1-203ENST00000414670 ALX4Q9H161 411 aaPredicted RBP5.53□□□□□ -1.52
ITGB1-203ENST00000414670 TSPAN10Q9H1Z9 355 aaPredicted RBP5.53□□□□□ -1.52
ITGB1-203ENST00000414670 RERGLQ9H628 205 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 ADGRL4Q9HBW9 690 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 GPN1Q9HCN4 374 aaPredicted RBP5.53□□□□□ -1.52
ITGB1-203ENST00000414670 BRD7Q9NPI1 651 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 NUDT15Q9NV35 164 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 KLHL13Q9P2N7 655 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 MGAT4CQ9UBM8 478 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 B9D1Q9UPM9 204 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 LIPGQ9Y5X9 500 aa5.53□□□□□ -1.52
ITGB1-203ENST00000414670 TRAV6A0A075B6T7 132 aa5.52□□□□□ -1.53
ITGB1-203ENST00000414670 IGLV1-36A0A0B4J1U3 117 aa5.52□□□□□ -1.53
ITGB1-203ENST00000414670 A0A0G2JK05 382 aa5.52□□□□□ -1.53
ITGB1-203ENST00000414670 DAPL1A0PJW8 107 aa5.52□□□□□ -1.53
ITGB1-203ENST00000414670 SHISA3A0PJX4 238 aa5.52□□□□□ -1.53
ITGB1-203ENST00000414670 ZNF716A6NP11 495 aa5.52□□□□□ -1.53
ITGB1-203ENST00000414670 K7EM74 188 aa5.52□□□□□ -1.53
ITGB1-203ENST00000414670 ZNF593O00488 134 aaPredicted RBP5.52□□□□□ -1.53
ITGB1-203ENST00000414670 SSNA1O43805 119 aa5.52□□□□□ -1.53
ITGB1-203ENST00000414670 SLC16A7O60669 478 aa5.52□□□□□ -1.53
ITGB1-203ENST00000414670 KHDRBS3O75525 346 aaKnown RBP5.52□□□□□ -1.53
ITGB1-203ENST00000414670 SYNGR4O95473 234 aa5.52□□□□□ -1.53
ITGB1-203ENST00000414670 IGHG1P01857 330 aa5.52□□□□□ -1.53
ITGB1-203ENST00000414670 IGHG3P01860 377 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms