RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 MAGEB1P43366 347 aa17.79■□□□□ 0.44
VCPKMT-202ENST00000395860 SOX2P48431 317 aa17.79■□□□□ 0.44
VCPKMT-202ENST00000395860 MXD1Q05195 221 aa17.79■□□□□ 0.44
VCPKMT-202ENST00000395860 KRTAP27-1Q3LI81 207 aa17.79■□□□□ 0.44
VCPKMT-202ENST00000395860 BHLHA15Q7RTS1 189 aaPredicted RBP17.79■□□□□ 0.44
VCPKMT-202ENST00000395860 PRSS45Q7RTY3 260 aa17.79■□□□□ 0.44
VCPKMT-202ENST00000395860 MDP1Q86V88 176 aa17.79■□□□□ 0.44
VCPKMT-202ENST00000395860 OR51A4Q8NGJ6 313 aa17.79■□□□□ 0.44
VCPKMT-202ENST00000395860 PHYHIPQ92561 330 aa17.79■□□□□ 0.44
VCPKMT-202ENST00000395860 PPIL3Q9H2H8 161 aaKnown RBP17.79■□□□□ 0.44
VCPKMT-202ENST00000395860 HHLA2Q9UM44 414 aa17.79■□□□□ 0.44
VCPKMT-202ENST00000395860 ATRXP46100 2492 aa17.78■□□□□ 0.44
VCPKMT-202ENST00000395860 LOC107986453A0A1B0GWG9 222 aa17.78■□□□□ 0.44
VCPKMT-202ENST00000395860 A0A1W2PR80 420 aa17.78■□□□□ 0.44
VCPKMT-202ENST00000395860 ARL6IP5O75915 188 aa17.78■□□□□ 0.44
VCPKMT-202ENST00000395860 ACSM4P0C7M7 580 aa17.78■□□□□ 0.44
VCPKMT-202ENST00000395860 MYL9P24844 172 aa17.78■□□□□ 0.44
VCPKMT-202ENST00000395860 SDC2P34741 201 aa17.78■□□□□ 0.44
VCPKMT-202ENST00000395860 MRGPRGQ86SM5 289 aa17.78■□□□□ 0.44
VCPKMT-202ENST00000395860 C17orf78Q8N4C9 275 aa17.78■□□□□ 0.44
VCPKMT-202ENST00000395860 TPRP12270 2363 aaKnown RBP17.77■□□□□ 0.44
VCPKMT-202ENST00000395860 ARPC4-TTLL3A0A0A6YYG9 625 aa17.77■□□□□ 0.44
VCPKMT-202ENST00000395860 A8MXE2 369 aa17.77■□□□□ 0.44
VCPKMT-202ENST00000395860 CASKO14936 926 aa17.77■□□□□ 0.44
VCPKMT-202ENST00000395860 TBX1O43435 398 aa17.77■□□□□ 0.44
VCPKMT-202ENST00000395860 IL1AP01583 271 aa17.77■□□□□ 0.44
VCPKMT-202ENST00000395860 UCHL1P09936 223 aa17.77■□□□□ 0.44
VCPKMT-202ENST00000395860 STOMP27105 288 aa17.77■□□□□ 0.44
VCPKMT-202ENST00000395860 RPS19P39019 145 aaKnown RBP17.77■□□□□ 0.44
VCPKMT-202ENST00000395860 DGUOKQ16854 277 aa17.77■□□□□ 0.44
VCPKMT-202ENST00000395860 COMMD2Q86X83 199 aa17.77■□□□□ 0.44
VCPKMT-202ENST00000395860 THRSPQ92748 146 aa17.77■□□□□ 0.44
VCPKMT-202ENST00000395860 DERL3Q96Q80 235 aa17.77■□□□□ 0.44
VCPKMT-202ENST00000395860 NOX4Q9NPH5 578 aa17.77■□□□□ 0.44
VCPKMT-202ENST00000395860 SNTG1Q9NSN8 517 aa17.77■□□□□ 0.44
VCPKMT-202ENST00000395860 ZNF319Q9P2F9 582 aa17.77■□□□□ 0.44
VCPKMT-202ENST00000395860 DHDHQ9UQ10 334 aa17.77■□□□□ 0.44
VCPKMT-202ENST00000395860 CCL21O00585 134 aa17.76■□□□□ 0.43
VCPKMT-202ENST00000395860 ATXN7O15265 892 aaPredicted RBP17.76■□□□□ 0.43
VCPKMT-202ENST00000395860 IL32P24001 234 aa17.76■□□□□ 0.43
VCPKMT-202ENST00000395860 HGFACQ04756 655 aa17.76■□□□□ 0.43
VCPKMT-202ENST00000395860 MRPL49Q13405 166 aaKnown RBP17.76■□□□□ 0.43
VCPKMT-202ENST00000395860 HSD17B12Q53GQ0 312 aa17.76■□□□□ 0.43
VCPKMT-202ENST00000395860 OR51E1Q8TCB6 317 aa17.76■□□□□ 0.43
VCPKMT-202ENST00000395860 TMEM106AQ96A25 262 aa17.76■□□□□ 0.43
VCPKMT-202ENST00000395860 MED18Q9BUE0 208 aa17.76■□□□□ 0.43
VCPKMT-202ENST00000395860 TPK1Q9H3S4 243 aa17.76■□□□□ 0.43
VCPKMT-202ENST00000395860 SP140LQ9H930 580 aa17.76■□□□□ 0.43
VCPKMT-202ENST00000395860 NBEAQ8NFP9 2946 aa17.76■□□□□ 0.43
VCPKMT-202ENST00000395860 LOC100509620A0A075B734 347 aa17.76■□□□□ 0.43
VCPKMT-202ENST00000395860 A0A1B0GVI7 797 aa17.76■□□□□ 0.43
VCPKMT-202ENST00000395860 SHISA3A0PJX4 238 aa17.76■□□□□ 0.43
VCPKMT-202ENST00000395860 SYT7O43581 403 aa17.76■□□□□ 0.43
VCPKMT-202ENST00000395860 LCATP04180 440 aa17.76■□□□□ 0.43
VCPKMT-202ENST00000395860 CCNOP22674 350 aa17.76■□□□□ 0.43
VCPKMT-202ENST00000395860 ANOS1P23352 680 aa17.76■□□□□ 0.43
VCPKMT-202ENST00000395860 APLNRP35414 380 aa17.76■□□□□ 0.43
VCPKMT-202ENST00000395860 MTNR1BP49286 362 aa17.76■□□□□ 0.43
VCPKMT-202ENST00000395860 GFOD2Q3B7J2 385 aa17.76■□□□□ 0.43
VCPKMT-202ENST00000395860 LIX1LQ8IVB5 337 aa17.76■□□□□ 0.43
VCPKMT-202ENST00000395860 ZNF584Q8IVC4 421 aa17.76■□□□□ 0.43
VCPKMT-202ENST00000395860 OR52H1Q8NGJ2 320 aa17.76■□□□□ 0.43
VCPKMT-202ENST00000395860 OR13C3Q8NGS6 347 aa17.76■□□□□ 0.43
VCPKMT-202ENST00000395860 KCNS3Q9BQ31 491 aa17.76■□□□□ 0.43
VCPKMT-202ENST00000395860 OR10A2Q9H208 303 aa17.76■□□□□ 0.43
VCPKMT-202ENST00000395860 C5orf49A4QMS7 147 aa17.75■□□□□ 0.43
VCPKMT-202ENST00000395860 PIN1P1O15428 100 aa17.75■□□□□ 0.43
VCPKMT-202ENST00000395860 CLEC2LP0C7M8 214 aa17.75■□□□□ 0.43
VCPKMT-202ENST00000395860 SOX6P35712 828 aa17.75■□□□□ 0.43
VCPKMT-202ENST00000395860 STAC2Q6ZMT1 411 aa17.75■□□□□ 0.43
VCPKMT-202ENST00000395860 WDR31Q8NA23 367 aa17.75■□□□□ 0.43
VCPKMT-202ENST00000395860 RELL2Q8NC24 303 aaPredicted RBP17.75■□□□□ 0.43
VCPKMT-202ENST00000395860 ASB5Q8WWX0 329 aa17.75■□□□□ 0.43
VCPKMT-202ENST00000395860 ZNF75AQ96N20 296 aa17.75■□□□□ 0.43
VCPKMT-202ENST00000395860 GPR84Q9NQS5 396 aa17.75■□□□□ 0.43
VCPKMT-202ENST00000395860 CCDC59Q9P031 241 aaKnown RBP17.75■□□□□ 0.43
VCPKMT-202ENST00000395860 RAF1P04049 648 aa17.74■□□□□ 0.43
VCPKMT-202ENST00000395860 SERPINA5P05154 406 aa17.74■□□□□ 0.43
VCPKMT-202ENST00000395860 CD2P06729 351 aa17.74■□□□□ 0.43
VCPKMT-202ENST00000395860 CCL2P13500 99 aa17.74■□□□□ 0.43
VCPKMT-202ENST00000395860 SNAI3Q3KNW1 292 aa17.74■□□□□ 0.43
VCPKMT-202ENST00000395860 ORAI1Q96D31 301 aa17.74■□□□□ 0.43
VCPKMT-202ENST00000395860 MS4A3Q96HJ5 214 aa17.74■□□□□ 0.43
VCPKMT-202ENST00000395860 OBP2BQ9NPH6 170 aa17.74■□□□□ 0.43
VCPKMT-202ENST00000395860 AMDHD2Q9Y303 409 aa17.74■□□□□ 0.43
VCPKMT-202ENST00000395860 SPTA1P02549 2419 aa17.74■□□□□ 0.43
VCPKMT-202ENST00000395860 TRAV1-2A0A0B4J238 106 aa17.74■□□□□ 0.43
VCPKMT-202ENST00000395860 A0A0U1RQV5 110 aa17.74■□□□□ 0.43
VCPKMT-202ENST00000395860 A0A1B0GTI1 187 aa17.74■□□□□ 0.43
VCPKMT-202ENST00000395860 SMIM30A4D0T7 59 aa17.74■□□□□ 0.43
VCPKMT-202ENST00000395860 C5orf63A6NC05 138 aa17.74■□□□□ 0.43
VCPKMT-202ENST00000395860 OR5H1A6NKK0 313 aa17.74■□□□□ 0.43
VCPKMT-202ENST00000395860 SRMP19623 302 aa17.74■□□□□ 0.43
VCPKMT-202ENST00000395860 PSMB1P20618 241 aaKnown RBP17.74■□□□□ 0.43
VCPKMT-202ENST00000395860 RORCP51449 518 aa17.74■□□□□ 0.43
VCPKMT-202ENST00000395860 TPRA1Q86W33 373 aa17.74■□□□□ 0.43
VCPKMT-202ENST00000395860 SLC30A7Q8NEW0 376 aa17.74■□□□□ 0.43
VCPKMT-202ENST00000395860 POM121L2Q96KW2 1035 aa17.74■□□□□ 0.43
VCPKMT-202ENST00000395860 TSC22D3Q99576 134 aa17.74■□□□□ 0.43
VCPKMT-202ENST00000395860 ELOVL5Q9NYP7 299 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms