RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 DYRK4Q9NR20 520 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 ACOXLQ9NUZ1 547 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 NUDT15Q9NV35 164 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 TXNL4BQ9NX01 149 aaKnown RBP-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 NSMCE4AQ9NXX6 385 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 NKIRAS2Q9NYR9 191 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 MRPL15Q9P015 296 aaKnown RBP-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 MRPL27Q9P0M9 148 aaKnown RBP-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 STX18Q9P2W9 335 aaKnown RBP-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 NARFQ9UHQ1 456 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 CYB5R1Q9UHQ9 305 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 TRMT112Q9UI30 125 aaKnown RBP-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 CES1P1Q9UKY3 287 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 PSMD13Q9UNM6 376 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 FAM50BQ9Y247 325 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 STARD10Q9Y365 291 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 HES2Q9Y543 173 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 MINOS1-NBL1R4GNA1 71 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 MYO7AQ13402 2215 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 DNAH8Q96JB1 4490 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 ZDBF2Q9HCK1 2354 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 ATP10DQ9P241 1426 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 PKDREJQ9NTG1 2253 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 KIF7Q2M1P5 1343 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 FANCIQ9NVI1 1328 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 MAPK8IP3Q9UPT6 1336 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 ATG2BQ96BY7 2078 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 EML5Q05BV3 1969 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 SPG11Q96JI7 2443 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 EIF4G1Q04637 1599 aaKnown RBP-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 RTL1A6NKG5 1358 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 NCKAP5O14513 1909 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 TMSB15BA0A087X1C1 80 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 TRAV8-6A0A0B4J262 113 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 TRBV30A0A0K0K1B3 111 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 LOC102725191A0A1B0GVB3 256 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 TMEM89A2RUT3 159 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 CTAGE15A4D2H0 777 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 CCDC182A6NF36 153 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 C2orf70A6NJV1 201 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 OR6C65A6NJZ3 312 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 WASHC1A8K0Z3 465 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 HIDE1A8MVS5 230 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 LOC110117498-PIK3R3F6TDL0 507 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 H3BMQ9 156 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 K7ERS5 55 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 PRRG1O14668 218 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 ITGB1BP1O14713 200 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 ARPC1BO15143 372 aaKnown RBP-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 INE1O15225 51 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 PRKYO43930 277 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 EIF4E2O60573 245 aaKnown RBP-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 UPK3AO75631 287 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 FCN3O75636 299 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 RAD51DO75771 328 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 CIAO1O76071 339 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 STAMBPO95630 424 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 GPR75O95800 540 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 SCGB1D2O95969 90 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 IGHV2-5P01817 119 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 LGALS2P05162 132 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 CLEC3BP05452 202 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 FGF4P08620 206 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 CD3GP09693 182 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 PABPC4LP0CB38 370 aaKnown RBP-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 OR12D1P0DN82 309 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 CALM1P0DP23 149 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 CALM2P0DP24 149 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 CALM3P0DP25 149 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 MLNP12872 115 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 CCL4P13236 92 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 CTLA4P16410 223 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 TPSB2P20231 275 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 RAB3BP20337 219 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 CALB2P22676 271 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 PSMA3P25788 255 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 PSMA4P25789 261 aaKnown RBP-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 PSMB4P28070 264 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 HTR2CP28335 458 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 PTPN6P29350 595 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 STIP1P31948 543 aaKnown RBP-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 HRH1P35367 487 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 RORAP35398 523 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 MAS1LP35410 378 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 ZNF93P35789 620 aaPredicted RBP-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 CHKAP35790 457 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 RGS2P41220 211 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 FRKP42685 505 aaPredicted RBP-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 OR3A1P47881 315 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 NUDT2P50583 147 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 TNFSF10P50591 281 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 RPL14P50914 215 aaKnown RBP-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 SGSHP51688 502 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 PRKXP51817 358 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 CNN1P51911 297 aaKnown RBP-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 SMSP52788 366 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 MRPL12P52815 198 aaKnown RBP-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 AKR1C2P52895 323 aa-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 SUB1P53999 127 aaKnown RBP eCLIP-0.65□□□□□ -2.51
TRAJ28-201ENST00000390509 ATXN3P54252 364 aaPredicted RBP-0.65□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms