RNA–Protein interactions for RNA: ENST00000383861.1

RNU1-28P-201, Transcript of RNA, U1 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU1-28P, Length 164 nt, Biotype snRNA, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-28P-201ENST00000383861 CCL21O00585 134 aa7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 EEF1E1O43324 174 aaKnown RBP7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 XRCC2O43543 280 aa7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 SYT7O43581 403 aa7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 CDRT1O95170 752 aa7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 LCATP04180 440 aa7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 PATE4P0C8F1 98 aa7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 PPP3CBP16298 524 aa7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 ZNF182P17025 639 aaPredicted RBP7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 CCL1P22362 96 aa7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 TUBG1P23258 451 aa7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 CALRP27797 417 aaKnown RBP7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 CHRNB4P30926 498 aa7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 MALLQ13021 153 aa7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 SLC25A35Q3KQZ1 300 aa7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 ZNF474Q6S9Z5 364 aaPredicted RBP7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 PRSS45Q7RTY3 260 aa7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 MDP1Q86V88 176 aa7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 GALNT11Q8NCW6 608 aa7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 CPEB3Q8NE35 698 aaKnown RBP7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 OR8B12Q8NGG6 310 aa7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 OR5L1Q8NGL2 311 aa7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 OR13C3Q8NGS6 347 aa7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 FGFBP3Q8TAT2 258 aa7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 NDNFQ8TB73 568 aa7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 AKAP1Q92667 903 aaKnown RBP eCLIP7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 APOBEC3DQ96AK3 386 aaPredicted RBP7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 DERL3Q96Q80 235 aa7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 OR14A2Q96R54 314 aa7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 DCUN1D5Q9BTE7 237 aa7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 C1QTNF5Q9BXJ0 243 aa7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 SLC24A3Q9HC58 644 aa7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 TCF7L1Q9HCS4 588 aa7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 TUBG2Q9NRH3 451 aa7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 SNTG1Q9NSN8 517 aa7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 JKAMPQ9P055 326 aa7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 EIF3KQ9UBQ5 218 aaKnown RBP7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 SH3BGRL2Q9UJC5 107 aa7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 FOXJ3Q9UPW0 622 aa7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 CACNA1AO00555 2505 aa7.71□□□□□ -1.18
RNU1-28P-201ENST00000383861 DNAJC13O75165 2243 aa7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 TRBV5-7A0A0A0MS05 114 aa7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 LOC107986453A0A1B0GWG9 222 aa7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 C5orf49A4QMS7 147 aa7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 MEGF11A6BM72 1044 aa7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 C16orf97H3BN30 126 aa7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 P2RY10O00398 339 aa7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 TBX1O43435 398 aa7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 SRMP19623 302 aa7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 APEX1P27695 318 aaKnown RBP7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 SDC2P34741 201 aa7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 DYNC1I2Q13409 638 aaKnown RBP7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 ODF4Q2M2E3 257 aa7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 RSPO1Q2MKA7 263 aaPredicted RBP7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 SOWAHCQ53LP3 525 aaPredicted RBP7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 STAC2Q6ZMT1 411 aa7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 COLCA1Q6ZS62 124 aa7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 Q6ZSR3 168 aa7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 COMMD2Q86X83 199 aa7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 SERPINA12Q8IW75 414 aa7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 WDR31Q8NA23 367 aa7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 PLPP7Q8NBV4 271 aa7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 SLC30A7Q8NEW0 376 aa7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 OR5D14Q8NGL3 314 aa7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 RGP1Q92546 391 aaPredicted RBP7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 TMEM106AQ96A25 262 aa7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 SLC25A46Q96AG3 418 aa7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 TRMT61AQ96FX7 289 aaKnown RBP7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 POM121L2Q96KW2 1035 aa7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 DACH2Q96NX9 599 aa7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 TSC22D3Q99576 134 aa7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 KCNS3Q9BQ31 491 aa7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 MRI1Q9BV20 369 aa7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 MMP27Q9H306 513 aa7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 CDH20Q9HBT6 801 aa7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 NEK6Q9HC98 313 aa7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 NOX4Q9NPH5 578 aa7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 ZNF275Q9NSD4 429 aaPredicted RBP7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 TBCCD1Q9NVR7 557 aa7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 CRNNQ9UBG3 495 aaPredicted RBP7.7□□□□□ -1.18
RNU1-28P-201ENST00000383861 SPTBN4Q9H254 2564 aa7.69□□□□□ -1.18
RNU1-28P-201ENST00000383861 FREM2Q5SZK8 3169 aa7.69□□□□□ -1.18
RNU1-28P-201ENST00000383861 A0A075B6Q4 140 aa7.69□□□□□ -1.18
RNU1-28P-201ENST00000383861 LOC100509620A0A075B734 347 aa7.69□□□□□ -1.18
RNU1-28P-201ENST00000383861 A0A1B0GTI1 187 aa7.69□□□□□ -1.18
RNU1-28P-201ENST00000383861 ANKRD61A6NGH8 418 aa7.69□□□□□ -1.18
RNU1-28P-201ENST00000383861 LRRTM2O43300 516 aa7.69□□□□□ -1.18
RNU1-28P-201ENST00000383861 ICMTO60725 284 aa7.69□□□□□ -1.18
RNU1-28P-201ENST00000383861 DHRS3O75911 302 aa7.69□□□□□ -1.18
RNU1-28P-201ENST00000383861 CLPXO76031 633 aa7.69□□□□□ -1.18
RNU1-28P-201ENST00000383861 IGKV3-15P01624 115 aa7.69□□□□□ -1.18
RNU1-28P-201ENST00000383861 IGLV3-1P01715 115 aa7.69□□□□□ -1.18
RNU1-28P-201ENST00000383861 ERCC1P07992 297 aaPredicted RBP7.69□□□□□ -1.18
RNU1-28P-201ENST00000383861 DBHP09172 617 aa7.69□□□□□ -1.18
RNU1-28P-201ENST00000383861 SLC2A1P11166 492 aa7.69□□□□□ -1.18
RNU1-28P-201ENST00000383861 ZNF14P17017 642 aaPredicted RBP7.69□□□□□ -1.18
RNU1-28P-201ENST00000383861 ZNF20P17024 532 aa7.69□□□□□ -1.18
RNU1-28P-201ENST00000383861 FSTP19883 344 aa7.69□□□□□ -1.18
RNU1-28P-201ENST00000383861 RAB3BP20337 219 aa7.69□□□□□ -1.18
RNU1-28P-201ENST00000383861 PCSK6P29122 969 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms