RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 B9D1Q9UPM9 204 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 TUBAL3A6NHL2 446 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 SIRPB1O00241 398 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 CCL21O00585 134 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 OR8U8P0C7N1 319 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 COX6B1P14854 86 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 HTD2P86397 168 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 DOC2BQ14184 412 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 SLC17A1Q14916 467 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 OGFOD3Q6PK18 319 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 CORO6Q6QEF8 472 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 SLC25A26Q70HW3 274 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 HPSE2Q8WWQ2 592 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 OR2B2Q9GZK3 357 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 SLC26A1Q9H2B4 701 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 MS4A5Q9H3V2 200 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 SCN4AP35499 1836 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 DNPH1O43598 174 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 UPK1BO75841 260 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 THBS4P35443 961 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 HAAOP46952 286 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 PPP1CAP62136 330 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 FZD5Q13467 585 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 EBPQ15125 230 aaKnown RBP8.08□□□□□ -1.12
CD28-201ENST00000324106 MDGA2Q7Z553 956 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 RASL10BQ96S79 203 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 SF3B5Q9BWJ5 86 aaKnown RBP8.08□□□□□ -1.12
CD28-201ENST00000324106 SPNS1Q9H2V7 528 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 EXOSC3Q9NQT5 275 aaKnown RBP8.08□□□□□ -1.12
CD28-201ENST00000324106 C19orf12Q9NSK7 152 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 RIF1Q5UIP0 2472 aaKnown RBP8.08□□□□□ -1.12
CD28-201ENST00000324106 SPTBN2O15020 2390 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 TRPM6Q9BX84 2022 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 H3BMQ9 156 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 GDNFP39905 211 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 CSRP2Q16527 193 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 RNF165Q6ZSG1 346 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 ZNF547Q8IVP9 402 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 C17orf78Q8N4C9 275 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 OR2Z1Q8NG97 314 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 SUN5Q8TC36 379 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 SMAP2Q8WU79 429 aaPredicted RBP8.08□□□□□ -1.12
CD28-201ENST00000324106 AP1S3Q96PC3 154 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 SARGQ9BW04 601 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 PBOV1Q9GZY1 135 aa8.08□□□□□ -1.12
CD28-201ENST00000324106 LIN7CQ9NUP9 197 aaKnown RBP8.08□□□□□ -1.12
CD28-201ENST00000324106 TXNL4BQ9NX01 149 aaKnown RBP8.08□□□□□ -1.12
CD28-201ENST00000324106 RP1P56715 2156 aa8.07□□□□□ -1.12
CD28-201ENST00000324106 TRABD2BA6NFA1 517 aa8.07□□□□□ -1.12
CD28-201ENST00000324106 MOSPD3O75425 235 aa8.07□□□□□ -1.12
CD28-201ENST00000324106 TNFSF8P32971 234 aa8.07□□□□□ -1.12
CD28-201ENST00000324106 POLR2IP36954 125 aaKnown RBP8.07□□□□□ -1.12
CD28-201ENST00000324106 EMDP50402 254 aa8.07□□□□□ -1.12
CD28-201ENST00000324106 RPS25P62851 125 aaKnown RBP8.07□□□□□ -1.12
CD28-201ENST00000324106 FUT7Q11130 342 aa8.07□□□□□ -1.12
CD28-201ENST00000324106 AGERQ15109 404 aa8.07□□□□□ -1.12
CD28-201ENST00000324106 ZNF74Q16587 644 aa8.07□□□□□ -1.12
CD28-201ENST00000324106 TRAT1Q6PIZ9 186 aa8.07□□□□□ -1.12
CD28-201ENST00000324106 DEGS2Q6QHC5 323 aa8.07□□□□□ -1.12
CD28-201ENST00000324106 VN1R4Q7Z5H5 301 aa8.07□□□□□ -1.12
CD28-201ENST00000324106 SLC30A7Q8NEW0 376 aa8.07□□□□□ -1.12
CD28-201ENST00000324106 BEST4Q8NFU0 473 aa8.07□□□□□ -1.12
CD28-201ENST00000324106 ZNF764Q96H86 408 aaPredicted RBP8.07□□□□□ -1.12
CD28-201ENST00000324106 GINS3Q9BRX5 216 aa8.07□□□□□ -1.12
CD28-201ENST00000324106 FSCN3Q9NQT6 498 aa8.07□□□□□ -1.12
CD28-201ENST00000324106 TRAPPC4Q9Y296 219 aa8.07□□□□□ -1.12
CD28-201ENST00000324106 ASB1Q9Y576 335 aa8.07□□□□□ -1.12
CD28-201ENST00000324106 CELA2BP08218 269 aaPredicted RBP8.07□□□□□ -1.12
CD28-201ENST00000324106 GABRA4P48169 554 aa8.07□□□□□ -1.12
CD28-201ENST00000324106 UBE2IP63279 158 aaKnown RBP8.07□□□□□ -1.12
CD28-201ENST00000324106 S100A12P80511 92 aa8.07□□□□□ -1.12
CD28-201ENST00000324106 VMA21Q3ZAQ7 101 aa8.07□□□□□ -1.12
CD28-201ENST00000324106 AKR7LQ8NHP1 331 aa8.07□□□□□ -1.12
CD28-201ENST00000324106 ADAT1Q9BUB4 502 aaKnown RBP8.07□□□□□ -1.12
CD28-201ENST00000324106 HES4Q9HCC6 221 aa8.07□□□□□ -1.12
CD28-201ENST00000324106 LRP3O75074 770 aa8.07□□□□□ -1.12
CD28-201ENST00000324106 WDR1O75083 606 aa8.07□□□□□ -1.12
CD28-201ENST00000324106 ZNF117Q03924 483 aa8.07□□□□□ -1.12
CD28-201ENST00000324106 BAXQ07812 192 aa8.07□□□□□ -1.12
CD28-201ENST00000324106 B3GNTL1Q67FW5 361 aaPredicted RBP8.07□□□□□ -1.12
CD28-201ENST00000324106 MOB1BQ7L9L4 216 aa8.07□□□□□ -1.12
CD28-201ENST00000324106 TSEN54Q7Z6J9 526 aaKnown RBP8.07□□□□□ -1.12
CD28-201ENST00000324106 BTF3L4Q96K17 158 aa8.07□□□□□ -1.12
CD28-201ENST00000324106 PDCD1LG2Q9BQ51 273 aa8.07□□□□□ -1.12
CD28-201ENST00000324106 MMP25Q9NPA2 562 aa8.07□□□□□ -1.12
CD28-201ENST00000324106 GMPR2Q9P2T1 348 aaKnown RBP8.07□□□□□ -1.12
CD28-201ENST00000324106 A4GNTQ9UNA3 340 aa8.07□□□□□ -1.12
CD28-201ENST00000324106 AMMECR1Q9Y4X0 333 aaPredicted RBP8.07□□□□□ -1.12
CD28-201ENST00000324106 A0A1B0GV50 99 aa8.06□□□□□ -1.12
CD28-201ENST00000324106 TMEM30CPA0ZSE6 113 aa8.06□□□□□ -1.12
CD28-201ENST00000324106 OR2W5A6NFC9 320 aa8.06□□□□□ -1.12
CD28-201ENST00000324106 AADACP22760 399 aa8.06□□□□□ -1.12
CD28-201ENST00000324106 LIPAP38571 399 aa8.06□□□□□ -1.12
CD28-201ENST00000324106 TNFAIP6P98066 277 aaPredicted RBP8.06□□□□□ -1.12
CD28-201ENST00000324106 BBS1Q8NFJ9 593 aa8.06□□□□□ -1.12
CD28-201ENST00000324106 OR4C3Q8NH37 302 aa8.06□□□□□ -1.12
CD28-201ENST00000324106 ST8SIA4Q92187 359 aa8.06□□□□□ -1.12
CD28-201ENST00000324106 DPCDQ9BVM2 203 aaPredicted RBP8.06□□□□□ -1.12
CD28-201ENST00000324106 CGGBP1Q9UFW8 167 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms