RNA–Protein interactions for RNA: ENST00000308873.10

RUNX3-201, Transcript of runt related transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUNX3, Length 3,861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-201ENST00000308873 MED9Q9NWA0 146 aa13.25□□□□□ -0.29
RUNX3-201ENST00000308873 PCOLCE2Q9UKZ9 415 aa13.25□□□□□ -0.29
RUNX3-201ENST00000308873 KCNK7Q9Y2U2 307 aa13.25□□□□□ -0.29
RUNX3-201ENST00000308873 SPTBN5Q9NRC6 3674 aaKnown RBP13.25□□□□□ -0.29
RUNX3-201ENST00000308873 MSGN1A6NI15 193 aa13.25□□□□□ -0.29
RUNX3-201ENST00000308873 SULT2B1O00204 365 aa13.25□□□□□ -0.29
RUNX3-201ENST00000308873 SNRNP70P08621 437 aaKnown RBP13.25□□□□□ -0.29
RUNX3-201ENST00000308873 CSNK2A1P68400 391 aaPredicted RBP13.25□□□□□ -0.29
RUNX3-201ENST00000308873 RSPO4Q2I0M5 234 aaPredicted RBP13.25□□□□□ -0.29
RUNX3-201ENST00000308873 PTCRAQ6ISU1 281 aaPredicted RBP13.25□□□□□ -0.29
RUNX3-201ENST00000308873 CSNK2A3Q8NEV1 391 aa13.25□□□□□ -0.29
RUNX3-201ENST00000308873 OR5AP2Q8NGF4 316 aa13.25□□□□□ -0.29
RUNX3-201ENST00000308873 ADAT3Q96EY9 351 aaPredicted RBP13.25□□□□□ -0.29
RUNX3-201ENST00000308873 RHBDD3Q9Y3P4 386 aa13.25□□□□□ -0.29
RUNX3-201ENST00000308873 PHF3Q92576 2039 aaKnown RBP13.25□□□□□ -0.29
RUNX3-201ENST00000308873 S100A9P06702 114 aaKnown RBP13.24□□□□□ -0.29
RUNX3-201ENST00000308873 CRABP1P29762 137 aa13.24□□□□□ -0.29
RUNX3-201ENST00000308873 PPICP45877 212 aa13.24□□□□□ -0.29
RUNX3-201ENST00000308873 BIDP55957 195 aa13.24□□□□□ -0.29
RUNX3-201ENST00000308873 FUT7Q11130 342 aa13.24□□□□□ -0.29
RUNX3-201ENST00000308873 SMCO1Q147U7 214 aa13.24□□□□□ -0.29
RUNX3-201ENST00000308873 EMC4Q5J8M3 183 aa13.24□□□□□ -0.29
RUNX3-201ENST00000308873 NANPQ8TBE9 248 aa13.24□□□□□ -0.29
RUNX3-201ENST00000308873 MESP1Q9BRJ9 268 aa13.24□□□□□ -0.29
RUNX3-201ENST00000308873 ZNF354AO60765 605 aaPredicted RBP13.24□□□□□ -0.29
RUNX3-201ENST00000308873 LRP3O75074 770 aa13.24□□□□□ -0.29
RUNX3-201ENST00000308873 NSA2O95478 260 aaKnown RBP13.24□□□□□ -0.29
RUNX3-201ENST00000308873 IL33O95760 270 aa13.24□□□□□ -0.29
RUNX3-201ENST00000308873 SFTPDP35247 375 aa13.24□□□□□ -0.29
RUNX3-201ENST00000308873 DHPSP49366 369 aaPredicted RBP13.24□□□□□ -0.29
RUNX3-201ENST00000308873 HSD17B7P56937 341 aa13.24□□□□□ -0.29
RUNX3-201ENST00000308873 SLC37A1P57057 533 aa13.24□□□□□ -0.29
RUNX3-201ENST00000308873 IKZF1Q13422 519 aa13.24□□□□□ -0.29
RUNX3-201ENST00000308873 TGIF1Q15583 401 aa13.24□□□□□ -0.29
RUNX3-201ENST00000308873 TMEM244Q5VVB8 128 aa13.24□□□□□ -0.29
RUNX3-201ENST00000308873 SLC26A10Q8NG04 563 aa13.24□□□□□ -0.29
RUNX3-201ENST00000308873 RAB3CQ96E17 227 aa13.24□□□□□ -0.29
RUNX3-201ENST00000308873 TXNIPQ9H3M7 391 aa13.24□□□□□ -0.29
RUNX3-201ENST00000308873 CYB5R1Q9UHQ9 305 aa13.24□□□□□ -0.29
RUNX3-201ENST00000308873 R4GMQ9 66 aa13.24□□□□□ -0.29
RUNX3-201ENST00000308873 IGKV1D-43A0A0B4J1Z2 117 aa13.24□□□□□ -0.29
RUNX3-201ENST00000308873 TEX13DA0A0J9YY54 714 aaPredicted RBP13.24□□□□□ -0.29
RUNX3-201ENST00000308873 SOCS1O15524 211 aa13.24□□□□□ -0.29
RUNX3-201ENST00000308873 PRH1P02810 166 aa13.24□□□□□ -0.29
RUNX3-201ENST00000308873 CRYBA1P05813 215 aa13.24□□□□□ -0.29
RUNX3-201ENST00000308873 RCC1P18754 421 aaPredicted RBP13.24□□□□□ -0.29
RUNX3-201ENST00000308873 RAB6AP20340 208 aa13.24□□□□□ -0.29
RUNX3-201ENST00000308873 ELAVL1Q15717 326 aaKnown RBP13.24□□□□□ -0.29
RUNX3-201ENST00000308873 ISXQ2M1V0 245 aa13.24□□□□□ -0.29
RUNX3-201ENST00000308873 LANCL3Q6ZV70 420 aa13.24□□□□□ -0.29
RUNX3-201ENST00000308873 SLC16A13Q7RTY0 426 aa13.24□□□□□ -0.29
RUNX3-201ENST00000308873 TMEM104Q8NE00 496 aa13.24□□□□□ -0.29
RUNX3-201ENST00000308873 OR5H2Q8NGV7 314 aa13.24□□□□□ -0.29
RUNX3-201ENST00000308873 THRSPQ92748 146 aa13.24□□□□□ -0.29
RUNX3-201ENST00000308873 C14orf79Q96F83 325 aa13.24□□□□□ -0.29
RUNX3-201ENST00000308873 OR5K4A6NMS3 321 aa13.23□□□□□ -0.29
RUNX3-201ENST00000308873 DAOP14920 347 aa13.23□□□□□ -0.29
RUNX3-201ENST00000308873 RABIFP47224 123 aa13.23□□□□□ -0.29
RUNX3-201ENST00000308873 DMWDQ09019 674 aa13.23□□□□□ -0.29
RUNX3-201ENST00000308873 C9orf50Q5SZB4 431 aa13.23□□□□□ -0.29
RUNX3-201ENST00000308873 ZNF283Q8N7M2 679 aa13.23□□□□□ -0.29
RUNX3-201ENST00000308873 OR2AJ1Q8NGZ0 328 aa13.23□□□□□ -0.29
RUNX3-201ENST00000308873 TOMM40LQ969M1 308 aa13.23□□□□□ -0.29
RUNX3-201ENST00000308873 SCARF2Q96GP6 870 aaPredicted RBP13.23□□□□□ -0.29
RUNX3-201ENST00000308873 SCPEP1Q9HB40 452 aa13.23□□□□□ -0.29
RUNX3-201ENST00000308873 CUTCQ9NTM9 273 aa13.23□□□□□ -0.29
RUNX3-201ENST00000308873 EHFQ9NZC4 300 aa13.23□□□□□ -0.29
RUNX3-201ENST00000308873 RAB22AQ9UL26 194 aa13.23□□□□□ -0.29
RUNX3-201ENST00000308873 RAB27BO00194 218 aa13.23□□□□□ -0.29
RUNX3-201ENST00000308873 SGCEO43556 437 aa13.23□□□□□ -0.29
RUNX3-201ENST00000308873 SNAPINO95295 136 aa13.23□□□□□ -0.29
RUNX3-201ENST00000308873 ZBTB25P24278 435 aa13.23□□□□□ -0.29
RUNX3-201ENST00000308873 RAB13P51153 203 aa13.23□□□□□ -0.29
RUNX3-201ENST00000308873 SNRPEP62304 92 aaKnown RBP13.23□□□□□ -0.29
RUNX3-201ENST00000308873 PEA15Q15121 130 aa13.23□□□□□ -0.29
RUNX3-201ENST00000308873 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.23□□□□□ -0.29
RUNX3-201ENST00000308873 FAM180AQ6UWF9 173 aa13.23□□□□□ -0.29
RUNX3-201ENST00000308873 CATSPERDQ86XM0 798 aa13.23□□□□□ -0.29
RUNX3-201ENST00000308873 OR5D14Q8NGL3 314 aa13.23□□□□□ -0.29
RUNX3-201ENST00000308873 OR5AC2Q9NZP5 309 aa13.23□□□□□ -0.29
RUNX3-201ENST00000308873 KLRF1Q9NZS2 232 aa13.23□□□□□ -0.29
RUNX3-201ENST00000308873 RHPN2P1A8MT19 583 aa13.23□□□□□ -0.29
RUNX3-201ENST00000308873 CRHP06850 196 aa13.23□□□□□ -0.29
RUNX3-201ENST00000308873 VSIG8P0DPA2 414 aa13.23□□□□□ -0.29
RUNX3-201ENST00000308873 SERPINA2P20848 420 aa13.23□□□□□ -0.29
RUNX3-201ENST00000308873 GLRA1P23415 457 aa13.23□□□□□ -0.29
RUNX3-201ENST00000308873 CALCRP30988 508 aa13.23□□□□□ -0.29
RUNX3-201ENST00000308873 RAB32Q13637 225 aa13.23□□□□□ -0.29
RUNX3-201ENST00000308873 SGCBQ16585 318 aa13.23□□□□□ -0.29
RUNX3-201ENST00000308873 CD300LFQ8TDQ1 290 aa13.23□□□□□ -0.29
RUNX3-201ENST00000308873 ZNF775Q96BV0 537 aaPredicted RBP13.23□□□□□ -0.29
RUNX3-201ENST00000308873 RRNAD1Q96FB5 475 aaKnown RBP13.23□□□□□ -0.29
RUNX3-201ENST00000308873 USB1Q9BQ65 265 aaKnown RBP13.23□□□□□ -0.29
RUNX3-201ENST00000308873 S1PR5Q9H228 398 aa13.23□□□□□ -0.29
RUNX3-201ENST00000308873 BIN3Q9NQY0 253 aa13.23□□□□□ -0.29
RUNX3-201ENST00000308873 SUSD2Q9UGT4 822 aa13.23□□□□□ -0.29
RUNX3-201ENST00000308873 MRPS28Q9Y2Q9 187 aaKnown RBP13.23□□□□□ -0.29
RUNX3-201ENST00000308873 TICRRQ7Z2Z1 1910 aa13.22□□□□□ -0.29
RUNX3-201ENST00000308873 TXNL1O43396 289 aa13.22□□□□□ -0.29
RUNX3-201ENST00000308873 ZNF735P0CB33 412 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms