RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Sytl3Q99N48 607 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Znf346Q9R0B7 294 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 GzmmO08643 264 aa14.67□□□□□ -0.06
Trim28-201ENSMUST00000005705 Opn1mwO35599 359 aa14.67□□□□□ -0.06
Trim28-201ENSMUST00000005705 Hdac3O88895 424 aa14.67□□□□□ -0.06
Trim28-201ENSMUST00000005705 Tcrg-V1P06325 135 aa14.67□□□□□ -0.06
Trim28-201ENSMUST00000005705 Hoxb6P09023 224 aa14.67□□□□□ -0.06
Trim28-201ENSMUST00000005705 Garem1Q3UFT3 876 aa14.67□□□□□ -0.06
Trim28-201ENSMUST00000005705 RalyQ64012 312 aaKnown RBP14.67□□□□□ -0.06
Trim28-201ENSMUST00000005705 Npepl1Q6NSR8 524 aa14.67□□□□□ -0.06
Trim28-201ENSMUST00000005705 Olfr285Q7TS17 319 aa14.67□□□□□ -0.06
Trim28-201ENSMUST00000005705 Plekhm1Q7TSI1 1074 aa14.67□□□□□ -0.06
Trim28-201ENSMUST00000005705 Znf436Q8BPP0 452 aa14.67□□□□□ -0.06
Trim28-201ENSMUST00000005705 Prkd2Q8BZ03 875 aa14.67□□□□□ -0.06
Trim28-201ENSMUST00000005705 Slc35f4Q8BZK4 485 aa14.67□□□□□ -0.06
Trim28-201ENSMUST00000005705 MastlQ8C0P0 865 aa14.67□□□□□ -0.06
Trim28-201ENSMUST00000005705 Mic13Q8R404 119 aaKnown RBP14.67□□□□□ -0.06
Trim28-201ENSMUST00000005705 Olfr678Q8VG26 313 aa14.67□□□□□ -0.06
Trim28-201ENSMUST00000005705 NanpQ9CPT3 248 aa14.67□□□□□ -0.06
Trim28-201ENSMUST00000005705 2610524H06RikQ9CZU9 139 aa14.67□□□□□ -0.06
Trim28-201ENSMUST00000005705 Ptp4a3Q9D658 173 aa14.67□□□□□ -0.06
Trim28-201ENSMUST00000005705 Aadacl3A2A7Z8 408 aa14.67□□□□□ -0.06
Trim28-201ENSMUST00000005705 Zfp300A2AE21 645 aa14.67□□□□□ -0.06
Trim28-201ENSMUST00000005705 Tmem178bM0QWJ9 172 aa14.67□□□□□ -0.06
Trim28-201ENSMUST00000005705 Dpm1O70152 260 aa14.67□□□□□ -0.06
Trim28-201ENSMUST00000005705 EpxP49290 716 aa14.67□□□□□ -0.06
Trim28-201ENSMUST00000005705 4930438A08RikQ5SPH3 536 aa14.67□□□□□ -0.06
Trim28-201ENSMUST00000005705 Bloc1s3Q5U5M8 195 aa14.67□□□□□ -0.06
Trim28-201ENSMUST00000005705 Adam20Q7M763 760 aa14.67□□□□□ -0.06
Trim28-201ENSMUST00000005705 Skida1Q80YR3 822 aa14.67□□□□□ -0.06
Trim28-201ENSMUST00000005705 Gpr61Q8C010 449 aa14.67□□□□□ -0.06
Trim28-201ENSMUST00000005705 Pot1Q91WC1 640 aaKnown RBP14.67□□□□□ -0.06
Trim28-201ENSMUST00000005705 Olfr713Q920G5 324 aa14.67□□□□□ -0.06
Trim28-201ENSMUST00000005705 Emc6Q9CQW0 110 aa14.67□□□□□ -0.06
Trim28-201ENSMUST00000005705 Pga5Q9D106 387 aa14.67□□□□□ -0.06
Trim28-201ENSMUST00000005705 Nudt22Q9DD16 308 aa14.67□□□□□ -0.06
Trim28-201ENSMUST00000005705 Scamp2Q9ERN0 329 aa14.67□□□□□ -0.06
Trim28-201ENSMUST00000005705 Mrpl39Q9JKF7 336 aa14.67□□□□□ -0.06
Trim28-201ENSMUST00000005705 Olfr1130A0A1L1SQT2 314 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Mtg2A2AFK4 405 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Olfr1129A2AV41 314 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 RnlsA7RDN6 342 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Mllt6B1AR10 1109 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Lmx1bO88609 395 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Crisp2P16563 243 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Igfbp1P47876 272 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Grxcr2Q3TYR5 254 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Mettl27Q8BGM4 238 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Tmem108Q8BHE4 574 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Egln2Q91YE2 419 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Rnf128Q9D304 428 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Cers4Q9D6J1 393 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Asf1bQ9DAP7 202 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Mfsd1Q9DC37 464 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Izumo1rQ9EQF4 244 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Dok3Q9QZK7 444 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Ankrd60A2AMD2 318 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Olfr597L7N224 315 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Cbfa2t3O54972 620 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Uba1yP31254 1058 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Gmeb2P58929 530 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Doc2bP70169 412 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 S100a13P97352 98 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Milr1Q3TB92 246 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Rnft2Q3UF64 445 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Pptc7Q6NVE9 310 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 H2-M2Q6W9L1 343 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Fn3krpQ8K274 309 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Pycr3Q9DCC4 274 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Slc7a11Q9WTR6 502 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Zfp59P16373 634 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Rab3aP63011 220 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Prss48Q14B25 312 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Ift52Q62559 426 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Olfr883Q8VF64 309 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Olfr646Q8VGW2 312 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Clec2dQ91V08 207 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Wdr13Q91V09 485 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Mrpl28Q9D1B9 257 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Rpl22l1Q9D7S7 122 aaKnown RBP14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Mfsd4b2Q9D8I5 366 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Ethe1Q9DCM0 254 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Ch25hQ9Z0F5 298 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Kcnj16Q9Z307 419 aa14.66□□□□□ -0.06
Trim28-201ENSMUST00000005705 Prr23a1G3UW32 258 aa14.65□□□□□ -0.06
Trim28-201ENSMUST00000005705 Gm16434J3QN10 205 aa14.65□□□□□ -0.06
Trim28-201ENSMUST00000005705 Capn1O35350 713 aa14.65□□□□□ -0.06
Trim28-201ENSMUST00000005705 PnmtP40935 295 aa14.65□□□□□ -0.06
Trim28-201ENSMUST00000005705 Olfr733Q14AK5 308 aa14.65□□□□□ -0.06
Trim28-201ENSMUST00000005705 Zp3rQ60736 579 aa14.65□□□□□ -0.06
Trim28-201ENSMUST00000005705 Klhl9Q6ZPT1 617 aa14.65□□□□□ -0.06
Trim28-201ENSMUST00000005705 Kctd9Q80UN1 339 aa14.65□□□□□ -0.06
Trim28-201ENSMUST00000005705 Olfr582Q8VGV9 319 aa14.65□□□□□ -0.06
Trim28-201ENSMUST00000005705 Cavin3Q91VJ2 260 aa14.65□□□□□ -0.06
Trim28-201ENSMUST00000005705 RgccQ9DBX1 137 aa14.65□□□□□ -0.06
Trim28-201ENSMUST00000005705 Olfr27Q9EQ90 311 aa14.65□□□□□ -0.06
Trim28-201ENSMUST00000005705 Gm11756A2BEJ1 356 aa14.65□□□□□ -0.06
Trim28-201ENSMUST00000005705 G6pd2P97324 513 aa14.65□□□□□ -0.06
Trim28-201ENSMUST00000005705 VwceQ3U515 929 aa14.65□□□□□ -0.06
Trim28-201ENSMUST00000005705 Mex3dQ3UE17 643 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 25.7 ms