RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 TOMM40LQ969M1 308 aa14.28□□□□□ -0.12
MCF2L-232ENST00000535094 KLF15Q9UIH9 416 aa14.28□□□□□ -0.12
MCF2L-232ENST00000535094 ZNF106Q9H2Y7 1883 aaKnown RBP14.28□□□□□ -0.12
MCF2L-232ENST00000535094 TRBV5-5A0A0J9YX44 114 aa14.28□□□□□ -0.12
MCF2L-232ENST00000535094 LRP3O75074 770 aa14.28□□□□□ -0.12
MCF2L-232ENST00000535094 CPT2P23786 658 aa14.28□□□□□ -0.12
MCF2L-232ENST00000535094 EEF1A1P5Q5VTE0 462 aa14.28□□□□□ -0.12
MCF2L-232ENST00000535094 OR2AJ1Q8NGZ0 328 aa14.28□□□□□ -0.12
MCF2L-232ENST00000535094 PTGES2Q9H7Z7 377 aa14.28□□□□□ -0.12
MCF2L-232ENST00000535094 NDRG3Q9UGV2 375 aa14.28□□□□□ -0.12
MCF2L-232ENST00000535094 KNTC1P50748 2209 aa14.28□□□□□ -0.12
MCF2L-232ENST00000535094 TMED7-TICAM2A0A0A6YYA0 188 aa14.28□□□□□ -0.12
MCF2L-232ENST00000535094 SHISA8B8ZZ34 492 aa14.28□□□□□ -0.12
MCF2L-232ENST00000535094 H0YIG0 161 aa14.28□□□□□ -0.12
MCF2L-232ENST00000535094 SMIM10L1P0DMW3 83 aa14.28□□□□□ -0.12
MCF2L-232ENST00000535094 DAOP14920 347 aa14.28□□□□□ -0.12
MCF2L-232ENST00000535094 OR2B8PP59922 312 aa14.28□□□□□ -0.12
MCF2L-232ENST00000535094 GPR85P60893 370 aa14.28□□□□□ -0.12
MCF2L-232ENST00000535094 TLE3Q04726 772 aa14.28□□□□□ -0.12
MCF2L-232ENST00000535094 ZNF141Q15928 474 aa14.28□□□□□ -0.12
MCF2L-232ENST00000535094 ADAM5Q6NVV9 412 aa14.28□□□□□ -0.12
MCF2L-232ENST00000535094 LMX1AQ8TE12 382 aa14.28□□□□□ -0.12
MCF2L-232ENST00000535094 SMIM10Q96HG1 83 aa14.28□□□□□ -0.12
MCF2L-232ENST00000535094 ZNF426Q9BUY5 554 aa14.28□□□□□ -0.12
MCF2L-232ENST00000535094 NMNAT2Q9BZQ4 307 aa14.28□□□□□ -0.12
MCF2L-232ENST00000535094 RGCCQ9H4X1 137 aa14.28□□□□□ -0.12
MCF2L-232ENST00000535094 CNTD2Q9H8S5 307 aa14.28□□□□□ -0.12
MCF2L-232ENST00000535094 TRAV20A0A0B4J274 112 aa14.27□□□□□ -0.12
MCF2L-232ENST00000535094 HLA-DOBP13765 273 aa14.27□□□□□ -0.12
MCF2L-232ENST00000535094 RBMXP38159 391 aaKnown RBP14.27□□□□□ -0.12
MCF2L-232ENST00000535094 DHODHQ02127 395 aa14.27□□□□□ -0.12
MCF2L-232ENST00000535094 ATG4DQ86TL0 474 aaPredicted RBP14.27□□□□□ -0.12
MCF2L-232ENST00000535094 SLC43A2Q8N370 569 aa14.27□□□□□ -0.12
MCF2L-232ENST00000535094 NECAB3Q96P71 396 aaPredicted RBP14.27□□□□□ -0.12
MCF2L-232ENST00000535094 SCPEP1Q9HB40 452 aa14.27□□□□□ -0.12
MCF2L-232ENST00000535094 THSD7BQ9C0I4 1608 aa14.27□□□□□ -0.12
MCF2L-232ENST00000535094 PRSS44E7EML9 344 aa14.27□□□□□ -0.13
MCF2L-232ENST00000535094 ZNF595Q8IYB9 648 aa14.27□□□□□ -0.13
MCF2L-232ENST00000535094 ZNF283Q8N7M2 679 aa14.27□□□□□ -0.13
MCF2L-232ENST00000535094 ASB17Q8WXJ9 295 aa14.27□□□□□ -0.13
MCF2L-232ENST00000535094 ISOC2Q96AB3 205 aa14.27□□□□□ -0.13
MCF2L-232ENST00000535094 EHFQ9NZC4 300 aa14.27□□□□□ -0.13
MCF2L-232ENST00000535094 RP1L1Q8IWN7 2480 aaPredicted RBP14.27□□□□□ -0.13
MCF2L-232ENST00000535094 ITGB2P05107 769 aa14.27□□□□□ -0.13
MCF2L-232ENST00000535094 ID4P47928 161 aa14.27□□□□□ -0.13
MCF2L-232ENST00000535094 ZNF117Q03924 483 aa14.27□□□□□ -0.13
MCF2L-232ENST00000535094 ELAVL1Q15717 326 aaKnown RBP14.27□□□□□ -0.13
MCF2L-232ENST00000535094 VWA2Q5GFL6 755 aa14.27□□□□□ -0.13
MCF2L-232ENST00000535094 SHEQ5VZ18 495 aa14.27□□□□□ -0.13
MCF2L-232ENST00000535094 EIF5AL1Q6IS14 154 aaKnown RBP14.27□□□□□ -0.13
MCF2L-232ENST00000535094 IFT22Q9H7X7 185 aa14.27□□□□□ -0.13
MCF2L-232ENST00000535094 TRAV36DV7A0A075B6V5 113 aa14.26□□□□□ -0.13
MCF2L-232ENST00000535094 OR6C65A6NJZ3 312 aa14.26□□□□□ -0.13
MCF2L-232ENST00000535094 ACTL6AO96019 429 aa14.26□□□□□ -0.13
MCF2L-232ENST00000535094 APOC1P02654 83 aa14.26□□□□□ -0.13
MCF2L-232ENST00000535094 ZNF93P35789 620 aaPredicted RBP14.26□□□□□ -0.13
MCF2L-232ENST00000535094 CCINQ13939 588 aa14.26□□□□□ -0.13
MCF2L-232ENST00000535094 GLIPR1L1Q6UWM5 242 aa14.26□□□□□ -0.13
MCF2L-232ENST00000535094 BIVMQ86UB2 503 aa14.26□□□□□ -0.13
MCF2L-232ENST00000535094 OR13C8Q8NGS7 320 aa14.26□□□□□ -0.13
MCF2L-232ENST00000535094 OR51E1Q8TCB6 317 aa14.26□□□□□ -0.13
MCF2L-232ENST00000535094 TPSD1Q9BZJ3 242 aa14.26□□□□□ -0.13
MCF2L-232ENST00000535094 RHOFQ9HBH0 211 aa14.26□□□□□ -0.13
MCF2L-232ENST00000535094 A0A1W2PPC1 479 aa14.26□□□□□ -0.13
MCF2L-232ENST00000535094 EGR4Q05215 589 aa14.26□□□□□ -0.13
MCF2L-232ENST00000535094 TMEM244Q5VVB8 128 aa14.26□□□□□ -0.13
MCF2L-232ENST00000535094 FAM109BQ6ICB4 259 aaPredicted RBP14.26□□□□□ -0.13
MCF2L-232ENST00000535094 RNF128Q8TEB7 428 aa14.26□□□□□ -0.13
MCF2L-232ENST00000535094 CTHRC1Q96CG8 243 aa14.26□□□□□ -0.13
MCF2L-232ENST00000535094 RAB3CQ96E17 227 aa14.26□□□□□ -0.13
MCF2L-232ENST00000535094 AKR1E2Q96JD6 320 aa14.26□□□□□ -0.13
MCF2L-232ENST00000535094 CDC6Q99741 560 aa14.26□□□□□ -0.13
MCF2L-232ENST00000535094 ZFP57Q9NU63 452 aa14.26□□□□□ -0.13
MCF2L-232ENST00000535094 CCDC163A0A0D9SF12 145 aa14.26□□□□□ -0.13
MCF2L-232ENST00000535094 LOC101059948A0A1B0GTJ6 334 aa14.26□□□□□ -0.13
MCF2L-232ENST00000535094 ZNF205O95201 554 aa14.26□□□□□ -0.13
MCF2L-232ENST00000535094 TSPAN15O95858 294 aa14.26□□□□□ -0.13
MCF2L-232ENST00000535094 ABOP16442 354 aa14.26□□□□□ -0.13
MCF2L-232ENST00000535094 GFERP55789 205 aa14.26□□□□□ -0.13
MCF2L-232ENST00000535094 CHRFAM7AQ494W8 412 aa14.26□□□□□ -0.13
MCF2L-232ENST00000535094 DNM1P34Q6PK57 102 aa14.26□□□□□ -0.13
MCF2L-232ENST00000535094 OR51T1Q8NGJ9 327 aa14.26□□□□□ -0.13
MCF2L-232ENST00000535094 NICN1Q9BSH3 213 aa14.26□□□□□ -0.13
MCF2L-232ENST00000535094 CHRDQ9H2X0 955 aa14.26□□□□□ -0.13
MCF2L-232ENST00000535094 GDE1Q9NZC3 331 aa14.26□□□□□ -0.13
MCF2L-232ENST00000535094 SEMA4FO95754 770 aa14.25□□□□□ -0.13
MCF2L-232ENST00000535094 ABHD16AO95870 558 aa14.25□□□□□ -0.13
MCF2L-232ENST00000535094 CD1CP29017 333 aa14.25□□□□□ -0.13
MCF2L-232ENST00000535094 CRABP1P29762 137 aa14.25□□□□□ -0.13
MCF2L-232ENST00000535094 FXYD4P59646 89 aa14.25□□□□□ -0.13
MCF2L-232ENST00000535094 TGIF1Q15583 401 aa14.25□□□□□ -0.13
MCF2L-232ENST00000535094 PRTGQ2VWP7 1150 aa14.25□□□□□ -0.13
MCF2L-232ENST00000535094 IGSF11Q5DX21 431 aa14.25□□□□□ -0.13
MCF2L-232ENST00000535094 C1orf140Q5VVS0 124 aa14.25□□□□□ -0.13
MCF2L-232ENST00000535094 ETV3LQ6ZN32 361 aa14.25□□□□□ -0.13
MCF2L-232ENST00000535094 OR1M1Q8NGA1 313 aa14.25□□□□□ -0.13
MCF2L-232ENST00000535094 OR2I1PQ8NGU4 316 aa14.25□□□□□ -0.13
MCF2L-232ENST00000535094 OR52N5Q8NH56 324 aa14.25□□□□□ -0.13
MCF2L-232ENST00000535094 SLC19A3Q9BZV2 496 aa14.25□□□□□ -0.13
MCF2L-232ENST00000535094 MED9Q9NWA0 146 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms