RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 EMC9Q9Y3B6 208 aa16.25■□□□□ 0.19
SMPD1-208ENST00000533123 UGT2A1Q9Y4X1 527 aa16.25■□□□□ 0.19
SMPD1-208ENST00000533123 A0A0G2JK05 382 aa16.24■□□□□ 0.19
SMPD1-208ENST00000533123 IL2RAP01589 272 aa16.24■□□□□ 0.19
SMPD1-208ENST00000533123 GLI4P10075 376 aa16.24■□□□□ 0.19
SMPD1-208ENST00000533123 NR2C1P13056 603 aa16.24■□□□□ 0.19
SMPD1-208ENST00000533123 ZNF45Q02386 682 aa16.24■□□□□ 0.19
SMPD1-208ENST00000533123 ZNF181Q2M3W8 571 aa16.24■□□□□ 0.19
SMPD1-208ENST00000533123 IDNKQ5T6J7 187 aa16.24■□□□□ 0.19
SMPD1-208ENST00000533123 VWA1Q6PCB0 445 aa16.24■□□□□ 0.19
SMPD1-208ENST00000533123 UBE2J2Q8N2K1 259 aa16.24■□□□□ 0.19
SMPD1-208ENST00000533123 PRSS50Q9UI38 385 aa16.24■□□□□ 0.19
SMPD1-208ENST00000533123 ZNF879B4DU55 563 aa16.23■□□□□ 0.19
SMPD1-208ENST00000533123 DHHO43323 396 aa16.23■□□□□ 0.19
SMPD1-208ENST00000533123 TBX1O43435 398 aa16.23■□□□□ 0.19
SMPD1-208ENST00000533123 GATBO75879 557 aaKnown RBP16.23■□□□□ 0.19
SMPD1-208ENST00000533123 RCVRNP35243 200 aa16.23■□□□□ 0.19
SMPD1-208ENST00000533123 TIMP3P35625 211 aa16.23■□□□□ 0.19
SMPD1-208ENST00000533123 PMPCAQ10713 525 aa16.23■□□□□ 0.19
SMPD1-208ENST00000533123 MADCAM1Q13477 382 aa16.23■□□□□ 0.19
SMPD1-208ENST00000533123 UNQ9370/PRO34162Q6UXP9 181 aa16.23■□□□□ 0.19
SMPD1-208ENST00000533123 AKAP14Q86UN6 197 aa16.23■□□□□ 0.19
SMPD1-208ENST00000533123 OR51A4Q8NGJ6 313 aa16.23■□□□□ 0.19
SMPD1-208ENST00000533123 CYB5R1Q9UHQ9 305 aa16.23■□□□□ 0.19
SMPD1-208ENST00000533123 LHFPL6Q9Y693 200 aa16.23■□□□□ 0.19
SMPD1-208ENST00000533123 V9GYH0 126 aa16.23■□□□□ 0.19
SMPD1-208ENST00000533123 SOX2P48431 317 aa16.23■□□□□ 0.19
SMPD1-208ENST00000533123 ZNF133P52736 654 aaPredicted RBP16.23■□□□□ 0.19
SMPD1-208ENST00000533123 RIDAP52758 137 aaKnown RBP16.23■□□□□ 0.19
SMPD1-208ENST00000533123 CARTPTQ16568 116 aa16.23■□□□□ 0.19
SMPD1-208ENST00000533123 SLC25A35Q3KQZ1 300 aa16.23■□□□□ 0.19
SMPD1-208ENST00000533123 C10orf128Q5T292 105 aa16.23■□□□□ 0.19
SMPD1-208ENST00000533123 DDI2Q5TDH0 399 aa16.23■□□□□ 0.19
SMPD1-208ENST00000533123 PAMR1Q6UXH9 720 aa16.23■□□□□ 0.19
SMPD1-208ENST00000533123 CFAP77Q6ZQR2 320 aa16.23■□□□□ 0.19
SMPD1-208ENST00000533123 ZNF676Q8N7Q3 588 aa16.23■□□□□ 0.19
SMPD1-208ENST00000533123 HAVCR2Q8TDQ0 301 aa16.23■□□□□ 0.19
SMPD1-208ENST00000533123 WDFY2Q96P53 400 aa16.23■□□□□ 0.19
SMPD1-208ENST00000533123 BBC3Q96PG8 261 aaPredicted RBP16.23■□□□□ 0.19
SMPD1-208ENST00000533123 DERL3Q96Q80 235 aa16.23■□□□□ 0.19
SMPD1-208ENST00000533123 CENPMQ9NSP4 180 aa16.23■□□□□ 0.19
SMPD1-208ENST00000533123 UPB1Q9UBR1 384 aa16.23■□□□□ 0.19
SMPD1-208ENST00000533123 MYO7BQ6PIF6 2116 aa16.22■□□□□ 0.19
SMPD1-208ENST00000533123 TRGV8A0A0C4DH27 118 aa16.22■□□□□ 0.19
SMPD1-208ENST00000533123 HSPB2A8KAH6 182 aa16.22■□□□□ 0.19
SMPD1-208ENST00000533123 HPGDSO60760 199 aa16.22■□□□□ 0.19
SMPD1-208ENST00000533123 TNFSF13O75888 250 aa16.22■□□□□ 0.19
SMPD1-208ENST00000533123 ARL6IP5O75915 188 aa16.22■□□□□ 0.19
SMPD1-208ENST00000533123 TMIGD3P0DMS9 266 aaPredicted RBP16.22■□□□□ 0.19
SMPD1-208ENST00000533123 HSPB2Q16082 182 aa16.22■□□□□ 0.19
SMPD1-208ENST00000533123 HSD17B12Q53GQ0 312 aa16.22■□□□□ 0.19
SMPD1-208ENST00000533123 RIPPLY2Q5TAB7 128 aa16.22■□□□□ 0.19
SMPD1-208ENST00000533123 SFXN4Q6P4A7 337 aa16.22■□□□□ 0.19
SMPD1-208ENST00000533123 TPRA1Q86W33 373 aa16.22■□□□□ 0.19
SMPD1-208ENST00000533123 POC5Q8NA72 575 aa16.22■□□□□ 0.19
SMPD1-208ENST00000533123 OR10S1Q8NGN2 331 aa16.22■□□□□ 0.19
SMPD1-208ENST00000533123 LINC00470Q9BZP3 86 aa16.22■□□□□ 0.19
SMPD1-208ENST00000533123 GPR35Q9HC97 309 aa16.22■□□□□ 0.19
SMPD1-208ENST00000533123 POLR1DQ9Y2S0 133 aa16.22■□□□□ 0.19
SMPD1-208ENST00000533123 TRAV1-2A0A0B4J238 106 aa16.22■□□□□ 0.19
SMPD1-208ENST00000533123 TMEM212A6NML5 194 aa16.22■□□□□ 0.19
SMPD1-208ENST00000533123 SLC2A2P11168 524 aaPredicted RBP16.22■□□□□ 0.19
SMPD1-208ENST00000533123 THBS2P35442 1172 aa16.22■□□□□ 0.19
SMPD1-208ENST00000533123 OR3A2P47893 321 aa16.22■□□□□ 0.19
SMPD1-208ENST00000533123 FOXG1P55316 489 aaPredicted RBP16.22■□□□□ 0.19
SMPD1-208ENST00000533123 FAPQ12884 760 aa16.22■□□□□ 0.19
SMPD1-208ENST00000533123 CEACAM16Q2WEN9 425 aa16.22■□□□□ 0.19
SMPD1-208ENST00000533123 C9orf135Q5VTT2 229 aa16.22■□□□□ 0.19
SMPD1-208ENST00000533123 FDX2Q6P4F2 183 aa16.22■□□□□ 0.19
SMPD1-208ENST00000533123 SDHCQ99643 169 aaPredicted RBP16.22■□□□□ 0.19
SMPD1-208ENST00000533123 ANKRD61A6NGH8 418 aa16.21■□□□□ 0.19
SMPD1-208ENST00000533123 OR6C65A6NJZ3 312 aa16.21■□□□□ 0.19
SMPD1-208ENST00000533123 LOC110117498-PIK3R3F6TDL0 507 aa16.21■□□□□ 0.19
SMPD1-208ENST00000533123 DOK2O60496 412 aa16.21■□□□□ 0.19
SMPD1-208ENST00000533123 SPNP16150 400 aa16.21■□□□□ 0.19
SMPD1-208ENST00000533123 RAB3BP20337 219 aa16.21■□□□□ 0.19
SMPD1-208ENST00000533123 S100A1P23297 94 aa16.21■□□□□ 0.19
SMPD1-208ENST00000533123 MRPL49Q13405 166 aaKnown RBP16.21■□□□□ 0.19
SMPD1-208ENST00000533123 CEP78Q5JTW2 689 aa16.21■□□□□ 0.19
SMPD1-208ENST00000533123 IL17RDQ8NFM7 739 aa16.21■□□□□ 0.19
SMPD1-208ENST00000533123 RNF133Q8WVZ7 376 aa16.21■□□□□ 0.19
SMPD1-208ENST00000533123 SLAMF6Q96DU3 332 aa16.21■□□□□ 0.19
SMPD1-208ENST00000533123 COMMD4Q9H0A8 199 aa16.21■□□□□ 0.19
SMPD1-208ENST00000533123 GDF2Q9UK05 429 aaPredicted RBP16.21■□□□□ 0.19
SMPD1-208ENST00000533123 OSGIN2Q9Y236 505 aa16.21■□□□□ 0.19
SMPD1-208ENST00000533123 AK6Q9Y3D8 172 aaKnown RBP16.21■□□□□ 0.19
SMPD1-208ENST00000533123 TRBV5-5A0A0J9YX44 114 aa16.21■□□□□ 0.18
SMPD1-208ENST00000533123 TMCC2O75069 709 aa16.21■□□□□ 0.18
SMPD1-208ENST00000533123 SRSF10O75494 262 aaKnown RBP16.21■□□□□ 0.18
SMPD1-208ENST00000533123 SRMP19623 302 aa16.21■□□□□ 0.18
SMPD1-208ENST00000533123 AZGP1P25311 298 aaKnown RBP16.21■□□□□ 0.18
SMPD1-208ENST00000533123 CEACAM8P31997 349 aaPredicted RBP16.21■□□□□ 0.18
SMPD1-208ENST00000533123 ZNF79Q15937 498 aa16.21■□□□□ 0.18
SMPD1-208ENST00000533123 Q499Y3 187 aa16.21■□□□□ 0.18
SMPD1-208ENST00000533123 FBXW9Q5XUX1 488 aa16.21■□□□□ 0.18
SMPD1-208ENST00000533123 TFAP2EQ6VUC0 442 aa16.21■□□□□ 0.18
SMPD1-208ENST00000533123 OR6K3Q8NGY3 331 aa16.21■□□□□ 0.18
SMPD1-208ENST00000533123 STARD4Q96DR4 205 aa16.21■□□□□ 0.18
SMPD1-208ENST00000533123 DIRAS2Q96HU8 199 aa16.21■□□□□ 0.18
SMPD1-208ENST00000533123 ASH2LQ9UBL3 628 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms