RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 CXorf66Q5JRM2 361 aaPredicted RBP5.54□□□□□ -1.52
VIM-207ENST00000495528 C6orf141Q5SZD1 244 aa5.54□□□□□ -1.52
VIM-207ENST00000495528 MRPL2Q5T653 305 aaKnown RBP5.54□□□□□ -1.52
VIM-207ENST00000495528 LCE1AQ5T7P2 110 aa5.54□□□□□ -1.52
VIM-207ENST00000495528 RUSC1-AS1Q66K80 236 aa5.54□□□□□ -1.52
VIM-207ENST00000495528 DHRS4L2Q6PKH6 230 aa5.54□□□□□ -1.52
VIM-207ENST00000495528 FCRLAQ7L513 359 aa5.54□□□□□ -1.52
VIM-207ENST00000495528 BHLHA15Q7RTS1 189 aaPredicted RBP5.54□□□□□ -1.52
VIM-207ENST00000495528 COMTD1Q86VU5 262 aa5.54□□□□□ -1.52
VIM-207ENST00000495528 CARM1Q86X55 608 aa5.54□□□□□ -1.52
VIM-207ENST00000495528 ZDHHC21Q8IVQ6 265 aa5.54□□□□□ -1.52
VIM-207ENST00000495528 FOXRED2Q8IWF2 684 aa5.54□□□□□ -1.52
VIM-207ENST00000495528 ARIH2OSQ8N7S6 290 aa5.54□□□□□ -1.52
VIM-207ENST00000495528 OR4D11Q8NGI4 311 aa5.54□□□□□ -1.52
VIM-207ENST00000495528 CPNE4Q96A23 557 aaPredicted RBP5.54□□□□□ -1.52
VIM-207ENST00000495528 ZNF524Q96C55 264 aa5.54□□□□□ -1.52
VIM-207ENST00000495528 SLC47A1Q96FL8 570 aa5.54□□□□□ -1.52
VIM-207ENST00000495528 C19orf24Q9BVV8 132 aa5.54□□□□□ -1.52
VIM-207ENST00000495528 CHID1Q9BWS9 393 aa5.54□□□□□ -1.52
VIM-207ENST00000495528 CACNG6Q9BXT2 260 aa5.54□□□□□ -1.52
VIM-207ENST00000495528 POTEKPQ9BYX7 375 aa5.54□□□□□ -1.52
VIM-207ENST00000495528 LAT2Q9GZY6 243 aa5.54□□□□□ -1.52
VIM-207ENST00000495528 S100A14Q9HCY8 104 aa5.54□□□□□ -1.52
VIM-207ENST00000495528 FAM32AQ9Y421 112 aaKnown RBP5.54□□□□□ -1.52
VIM-207ENST00000495528 AP4S1Q9Y587 144 aa5.54□□□□□ -1.52
VIM-207ENST00000495528 IGLV5-37A0A075B6J1 123 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 IGHV3-15A0A0B4J1V0 119 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 A0A1W2PQD3 144 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 GNGT2O14610 69 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 AP3D1O14617 1153 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 ABCD4O14678 606 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 TPST2O60704 377 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 FKBP6O75344 327 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 TIPRLO75663 272 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 KRT36O76013 467 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 KDM4BO94953 1096 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 NUDT14O95848 222 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 IFNW1P05000 195 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 FABP3P05413 133 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 GPIP06744 558 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 IGHV4-31P0DP07 118 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 ZNF182P17025 639 aaPredicted RBP5.53□□□□□ -1.52
VIM-207ENST00000495528 IGHV1-2P23083 117 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 ACAA2P42765 397 aaKnown RBP5.53□□□□□ -1.52
VIM-207ENST00000495528 CCR4P51679 360 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 CDH11P55287 796 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 RGS8P57771 180 aaPredicted RBP5.53□□□□□ -1.52
VIM-207ENST00000495528 PPP1R8Q12972 351 aaKnown RBP5.53□□□□□ -1.52
VIM-207ENST00000495528 PPA1Q15181 289 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 RAB35Q15286 201 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 TOMM34Q15785 309 aaPredicted RBP5.53□□□□□ -1.52
VIM-207ENST00000495528 NRF1Q16656 503 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 ZSWIM7Q19AV6 140 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 LIN52Q52LA3 116 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 AGAP6Q5VW22 663 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 GGNBP1Q5YKI7 109 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 CYB5R2Q6BCY4 276 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 C11orf71Q6IPW1 123 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 CLEC2AQ6UVW9 174 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 CBLN3Q6UW01 205 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 PQLC2Q6ZP29 291 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 Q6ZT83 130 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 TSEN54Q7Z6J9 526 aaKnown RBP5.53□□□□□ -1.52
VIM-207ENST00000495528 PXKQ7Z7A4 578 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 CADM2Q8N3J6 435 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 TMCO5AQ8N6Q1 288 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 ZNF525Q8N782 197 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 ZNF114Q8NC26 417 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 ATP6V1C2Q8NEY4 427 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 OR6T1Q8NGN1 323 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 STMN2Q93045 179 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 C7orf34Q96L11 122 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 MCHR1Q99705 422 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 ARHGDIGQ99819 225 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 PSD2Q9BQI7 771 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 SHARPINQ9H0F6 387 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 COQ10BQ9H8M1 238 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 IL1RAPQ9NPH3 570 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 TIGARQ9NQ88 270 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 CTPS2Q9NRF8 586 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 CBLN4Q9NTU7 201 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 FAIMQ9NVQ4 179 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 NPAP1Q9NZP6 1156 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 RHCGQ9UBD6 479 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 ZNF580Q9UK33 172 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 SLC35A3Q9Y2D2 325 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 SLC9A8Q9Y2E8 581 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 PCDHGB1Q9Y5G3 927 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 ENPP4Q9Y6X5 453 aa5.53□□□□□ -1.52
VIM-207ENST00000495528 FREM1Q5H8C1 2179 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 CPSF4LA6NMK7 179 aaKnown RBP5.52□□□□□ -1.53
VIM-207ENST00000495528 EIF4E2O60573 245 aaKnown RBP5.52□□□□□ -1.53
VIM-207ENST00000495528 LMX1BO60663 402 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 CST1P01037 141 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 SLC25A16P16260 332 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 ITGA2P17301 1181 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 CCNA2P20248 432 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 EIF1P41567 113 aaKnown RBP5.52□□□□□ -1.53
VIM-207ENST00000495528 OR3A2P47893 321 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 IDH2P48735 452 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms