RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 FBXL3Q9UKT7 428 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 RAXQ9Y2V3 346 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 IGHV3-15A0A0B4J1V0 119 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 C7orf66A4D0T2 115 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 RGS13O14921 159 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 SULT1B1O43704 296 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 KHDRBS3O75525 346 aaKnown RBP12.85□□□□□ -0.35
COL5A1-205ENST00000464187 KRT33AO76009 404 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 YES1P07947 543 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 TMIGD3P0DMS9 266 aaPredicted RBP12.85□□□□□ -0.35
COL5A1-205ENST00000464187 CFPP27918 469 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 MNDAP41218 407 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 EIF1AXP47813 144 aaKnown RBP12.85□□□□□ -0.35
COL5A1-205ENST00000464187 LHX2P50458 406 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 CLDN15P56746 228 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 CARD18P57730 90 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 BCL2A1Q16548 175 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 TMEM69Q5SWH9 247 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 DCXRQ7Z4W1 244 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 GLB1L2Q8IW92 636 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 UEVLDQ8IX04 471 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 OR10D3Q8NH80 312 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 ITFG2Q969R8 447 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 UCN2Q96RP3 112 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 EMC6Q9BV81 110 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 CACNG6Q9BXT2 260 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 ZDHHC11Q9H8X9 412 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 R4GMQ9 66 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 ARPC4-TTLL3A0A0A6YYG9 625 aa12.84□□□□□ -0.35
COL5A1-205ENST00000464187 DNPH1O43598 174 aa12.84□□□□□ -0.35
COL5A1-205ENST00000464187 AQP8O94778 261 aa12.84□□□□□ -0.35
COL5A1-205ENST00000464187 DHFRP00374 187 aa12.84□□□□□ -0.35
COL5A1-205ENST00000464187 PDGFAP04085 211 aa12.84□□□□□ -0.35
COL5A1-205ENST00000464187 ITGB2P05107 769 aa12.84□□□□□ -0.35
COL5A1-205ENST00000464187 ZNF43P17038 809 aa12.84□□□□□ -0.35
COL5A1-205ENST00000464187 ENPP1P22413 925 aa12.84□□□□□ -0.35
COL5A1-205ENST00000464187 SCAND1P57086 179 aa12.84□□□□□ -0.35
COL5A1-205ENST00000464187 OR2V1Q8NHB1 315 aa12.84□□□□□ -0.35
COL5A1-205ENST00000464187 OXGR1Q96P68 337 aa12.84□□□□□ -0.35
COL5A1-205ENST00000464187 DEFB127Q9H1M4 99 aa12.84□□□□□ -0.35
COL5A1-205ENST00000464187 MRPL15Q9P015 296 aaKnown RBP12.84□□□□□ -0.35
COL5A1-205ENST00000464187 COPZ2Q9P299 210 aa12.84□□□□□ -0.35
COL5A1-205ENST00000464187 KLHL9Q9P2J3 617 aa12.84□□□□□ -0.35
COL5A1-205ENST00000464187 DHDHQ9UQ10 334 aa12.84□□□□□ -0.35
COL5A1-205ENST00000464187 BOLA1Q9Y3E2 137 aa12.84□□□□□ -0.35
COL5A1-205ENST00000464187 LOC102725191A0A1B0GVB3 256 aa12.83□□□□□ -0.35
COL5A1-205ENST00000464187 MKRN2OSH3BPM6 223 aa12.83□□□□□ -0.35
COL5A1-205ENST00000464187 TRAF3IP2O43734 574 aaPredicted RBP12.83□□□□□ -0.35
COL5A1-205ENST00000464187 CXCL13O43927 109 aa12.83□□□□□ -0.35
COL5A1-205ENST00000464187 GSTT2P0CG29 244 aa12.83□□□□□ -0.35
COL5A1-205ENST00000464187 GSTT2BP0CG30 244 aa12.83□□□□□ -0.35
COL5A1-205ENST00000464187 PTHLHP12272 177 aa12.83□□□□□ -0.35
COL5A1-205ENST00000464187 ZNF24P17028 368 aa12.83□□□□□ -0.35
COL5A1-205ENST00000464187 TAS2R20P59543 309 aa12.83□□□□□ -0.35
COL5A1-205ENST00000464187 SNTB2Q13425 540 aaKnown RBP12.83□□□□□ -0.35
COL5A1-205ENST00000464187 ZNF169Q14929 603 aaPredicted RBP12.83□□□□□ -0.35
COL5A1-205ENST00000464187 CDK10Q15131 360 aa12.83□□□□□ -0.35
COL5A1-205ENST00000464187 ASB5Q8WWX0 329 aa12.83□□□□□ -0.35
COL5A1-205ENST00000464187 NAA11Q9BSU3 229 aaPredicted RBP12.83□□□□□ -0.35
COL5A1-205ENST00000464187 GHITMQ9H3K2 345 aa12.83□□□□□ -0.35
COL5A1-205ENST00000464187 LDAHQ9H6V9 325 aa12.83□□□□□ -0.35
COL5A1-205ENST00000464187 G6PC2Q9NQR9 355 aa12.83□□□□□ -0.35
COL5A1-205ENST00000464187 PLSCR3Q9NRY6 295 aa12.83□□□□□ -0.35
COL5A1-205ENST00000464187 PAQR5Q9NXK6 330 aaPredicted RBP12.83□□□□□ -0.35
COL5A1-205ENST00000464187 RCE1Q9Y256 329 aa12.83□□□□□ -0.35
COL5A1-205ENST00000464187 EMC9Q9Y3B6 208 aa12.83□□□□□ -0.35
COL5A1-205ENST00000464187 LIPGQ9Y5X9 500 aa12.83□□□□□ -0.35
COL5A1-205ENST00000464187 FAM172BPA6NC97 362 aa12.83□□□□□ -0.36
COL5A1-205ENST00000464187 TTLL8A6PVC2 850 aa12.83□□□□□ -0.36
COL5A1-205ENST00000464187 K7EM74 188 aa12.83□□□□□ -0.36
COL5A1-205ENST00000464187 SMAD9O15198 467 aaKnown RBP12.83□□□□□ -0.36
COL5A1-205ENST00000464187 VAMP5O95183 116 aa12.83□□□□□ -0.36
COL5A1-205ENST00000464187 HRGP04196 525 aa12.83□□□□□ -0.36
COL5A1-205ENST00000464187 ITGA5P08648 1049 aa12.83□□□□□ -0.36
COL5A1-205ENST00000464187 ZNF708P17019 499 aa12.83□□□□□ -0.36
COL5A1-205ENST00000464187 PLA2G5P39877 138 aa12.83□□□□□ -0.36
COL5A1-205ENST00000464187 CLDN18P56856 261 aa12.83□□□□□ -0.36
COL5A1-205ENST00000464187 TMPRSS3P57727 454 aa12.83□□□□□ -0.36
COL5A1-205ENST00000464187 SRYQ05066 204 aa12.83□□□□□ -0.36
COL5A1-205ENST00000464187 TMEM255AQ5JRV8 349 aa12.83□□□□□ -0.36
COL5A1-205ENST00000464187 CORO6Q6QEF8 472 aa12.83□□□□□ -0.36
COL5A1-205ENST00000464187 BTN2A1Q7KYR7 527 aa12.83□□□□□ -0.36
COL5A1-205ENST00000464187 LIX1LQ8IVB5 337 aa12.83□□□□□ -0.36
COL5A1-205ENST00000464187 FCAMRQ8WWV6 532 aa12.83□□□□□ -0.36
COL5A1-205ENST00000464187 C11orf40Q8WZ69 217 aa12.83□□□□□ -0.36
COL5A1-205ENST00000464187 MRPL13Q9BYD1 178 aaKnown RBP12.83□□□□□ -0.36
COL5A1-205ENST00000464187 HRASLSQ9HDD0 168 aa12.83□□□□□ -0.36
COL5A1-205ENST00000464187 ING3Q9NXR8 418 aa12.83□□□□□ -0.36
COL5A1-205ENST00000464187 TRGV5A0A0B4J1U4 118 aa12.82□□□□□ -0.36
COL5A1-205ENST00000464187 SLC17A2O00624 439 aa12.82□□□□□ -0.36
COL5A1-205ENST00000464187 DOK2O60496 412 aa12.82□□□□□ -0.36
COL5A1-205ENST00000464187 ECDO95905 644 aaPredicted RBP12.82□□□□□ -0.36
COL5A1-205ENST00000464187 C1QBP02746 253 aa12.82□□□□□ -0.36
COL5A1-205ENST00000464187 H2AFB2P0C5Z0 115 aa12.82□□□□□ -0.36
COL5A1-205ENST00000464187 IGFBP3P17936 291 aaPredicted RBP12.82□□□□□ -0.36
COL5A1-205ENST00000464187 FSTP19883 344 aa12.82□□□□□ -0.36
COL5A1-205ENST00000464187 EFNB2P52799 333 aa12.82□□□□□ -0.36
COL5A1-205ENST00000464187 UCNP55089 124 aa12.82□□□□□ -0.36
COL5A1-205ENST00000464187 MRPS10P82664 201 aaKnown RBP12.82□□□□□ -0.36
COL5A1-205ENST00000464187 FCN2Q15485 313 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms