RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 ACSM4P0C7M7 580 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 GTF2E2P29084 291 aaKnown RBP4.29□□□□□ -1.72
RIF1-207ENST00000454583 CENPAP49450 140 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 RAG2P55895 527 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 CAV3P56539 151 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 TAS2R43P59537 309 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 ACTA2P62736 377 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 ACTG2P63267 376 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 SIRPAP78324 504 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 MRPL28Q13084 256 aaKnown RBP4.29□□□□□ -1.72
RIF1-207ENST00000454583 HNRNPA0Q13151 305 aaKnown RBP4.29□□□□□ -1.72
RIF1-207ENST00000454583 MELKQ14680 651 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 ELOA3BQ3SY89 546 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 TMEM176BQ3YBM2 270 aaPredicted RBP4.29□□□□□ -1.72
RIF1-207ENST00000454583 C1orf100Q5SVJ3 147 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 C1orf185Q5T7R7 199 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 KLBQ86Z14 1044 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 C11orf53Q8IXP5 236 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 SDR9C7Q8NEX9 313 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 ATP6V1C2Q8NEY4 427 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 ELOA3Q8NG57 546 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 ITLN2Q8WWU7 325 aaPredicted RBP4.29□□□□□ -1.72
RIF1-207ENST00000454583 ROBO4Q8WZ75 1007 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 C4orf45Q96LM5 186 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 EXO5Q9H790 373 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 HEXA-AS1Q9H8Q6 139 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 TNFRSF10DQ9UBN6 386 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 ZNF629Q9UEG4 869 aaPredicted RBP4.29□□□□□ -1.72
RIF1-207ENST00000454583 ABCA2Q9BZC7 2435 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 GCN1Q92616 2671 aaKnown RBP4.29□□□□□ -1.72
RIF1-207ENST00000454583 DYNC2H1Q8NCM8 4307 aaKnown RBP4.28□□□□□ -1.72
RIF1-207ENST00000454583 IGLV3-9A0A075B6K5 115 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 A0A1W2PQ09 198 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 TMEM247A6NEH6 219 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 FAM166BA8MTA8 275 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 H3BN98 237 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 CXCL13O43927 109 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 GPRIN2O60269 458 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 HPGDSO60760 199 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 APOL3O95236 402 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 ZNF735P0CB33 412 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 SAGP10523 405 aaPredicted RBP4.28□□□□□ -1.72
RIF1-207ENST00000454583 CALCRP30988 508 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 SERPINB10P48595 397 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 ZP1P60852 638 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 CXADRP78310 365 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 AGAP6Q5VW22 663 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 FAM214BQ7L5A3 538 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 KCTD20Q7Z5Y7 419 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 NRARPQ7Z6K4 114 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 LRRC28Q86X40 367 aaPredicted RBP4.28□□□□□ -1.72
RIF1-207ENST00000454583 C17orf78Q8N4C9 275 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 C11orf40Q8WZ69 217 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 GHSRQ92847 366 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 PTX4Q96A99 478 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 C1orf159Q96HA4 380 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 CNN2Q99439 309 aaKnown RBP4.28□□□□□ -1.72
RIF1-207ENST00000454583 VKORC1Q9BQB6 163 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 SOX7Q9BT81 388 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 SEBOXQ9HB31 216 aaPredicted RBP4.28□□□□□ -1.72
RIF1-207ENST00000454583 SPATA2Q9UM82 520 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 FOXJ3Q9UPW0 622 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 SPIN1Q9Y657 262 aaPredicted RBP4.28□□□□□ -1.72
RIF1-207ENST00000454583 TRAV8-7A0A075B6U6 113 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 AIPO00170 330 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 KPNA4O00629 521 aaPredicted RBP4.28□□□□□ -1.72
RIF1-207ENST00000454583 SLC19A2O60779 497 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 FSTL3O95633 263 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 TTRP02766 147 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 HLA-DPB1P04440 258 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 ZNF3P17036 446 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 NAT1P18440 290 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 LAP3P28838 519 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 PAX5Q02548 391 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 POU3F1Q03052 451 aaPredicted RBP4.28□□□□□ -1.72
RIF1-207ENST00000454583 HLA-DQA1Q5Y7H0 255 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 ADAM5Q6NVV9 412 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 SPATC1Q76KD6 591 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 KDM8Q8N371 416 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 OR51G2Q8NGK0 314 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 FNDC9Q8TBE3 224 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 DACT3Q96B18 629 aaPredicted RBP4.28□□□□□ -1.72
RIF1-207ENST00000454583 HES4Q9HCC6 221 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.28□□□□□ -1.721e-7■■■■■ 28.3
RIF1-207ENST00000454583 CHD6Q8TD26 2715 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 IGKV1-9A0A0C4DH69 117 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 A6NIZ1 184 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 GJE1A6NN92 205 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 DEFB108AA8MXU0 73 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 PRR23D1E9PI22 279 aaPredicted RBP4.28□□□□□ -1.72
RIF1-207ENST00000454583 MAGEB4O15481 346 aaPredicted RBP4.28□□□□□ -1.72
RIF1-207ENST00000454583 CLDN1O95832 211 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 ADH4P08319 380 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 ACAA1P09110 424 aaPredicted RBP4.28□□□□□ -1.72
RIF1-207ENST00000454583 PRR23D2P0DMB1 279 aaPredicted RBP4.28□□□□□ -1.72
RIF1-207ENST00000454583 AHCYP23526 432 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 GDF1P27539 372 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 DAP3P51398 398 aaKnown RBP4.28□□□□□ -1.72
RIF1-207ENST00000454583 RAP1BP61224 184 aa4.28□□□□□ -1.72
RIF1-207ENST00000454583 RAP1AP62834 184 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms