RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 ACTL6AO96019 429 aa11.9□□□□□ -0.5
TRIM40-207ENST00000396581 CTLA4P16410 223 aa11.9□□□□□ -0.5
TRIM40-207ENST00000396581 TBPP20226 339 aa11.9□□□□□ -0.5
TRIM40-207ENST00000396581 ADAM8P78325 824 aa11.9□□□□□ -0.5
TRIM40-207ENST00000396581 EIF2B1Q14232 305 aaKnown RBP11.9□□□□□ -0.5
TRIM40-207ENST00000396581 PCK2Q16822 640 aa11.9□□□□□ -0.5
TRIM40-207ENST00000396581 ZNF528Q3MIS6 628 aa11.9□□□□□ -0.5
TRIM40-207ENST00000396581 CDNFQ49AH0 187 aa11.9□□□□□ -0.5
TRIM40-207ENST00000396581 C1QL3Q5VWW1 255 aa11.9□□□□□ -0.5
TRIM40-207ENST00000396581 OTPQ5XKR4 325 aa11.9□□□□□ -0.5
TRIM40-207ENST00000396581 PGAP1Q75T13 922 aa11.9□□□□□ -0.5
TRIM40-207ENST00000396581 MDGA2Q7Z553 956 aa11.9□□□□□ -0.5
TRIM40-207ENST00000396581 CD163Q86VB7 1156 aa11.9□□□□□ -0.5
TRIM40-207ENST00000396581 DTWD2Q8NBA8 298 aa11.9□□□□□ -0.5
TRIM40-207ENST00000396581 SLC46A1Q96NT5 459 aa11.9□□□□□ -0.5
TRIM40-207ENST00000396581 NMES1Q9C002 83 aa11.9□□□□□ -0.5
TRIM40-207ENST00000396581 NXF5Q9H1B4 397 aaKnown RBP11.9□□□□□ -0.5
TRIM40-207ENST00000396581 ASF1BQ9NVP2 202 aa11.9□□□□□ -0.5
TRIM40-207ENST00000396581 MKL2Q9ULH7 1088 aa11.9□□□□□ -0.5
TRIM40-207ENST00000396581 SPAG17Q6Q759 2223 aa11.9□□□□□ -0.5
TRIM40-207ENST00000396581 CPAMD8Q8IZJ3 1885 aa11.9□□□□□ -0.5
TRIM40-207ENST00000396581 PQLC2LA1A4F0 135 aa11.9□□□□□ -0.51
TRIM40-207ENST00000396581 METTL21EPA6NDL7 271 aa11.9□□□□□ -0.51
TRIM40-207ENST00000396581 OR2AT4A6NND4 320 aa11.9□□□□□ -0.51
TRIM40-207ENST00000396581 C11orf98E9PRG8 122 aa11.9□□□□□ -0.51
TRIM40-207ENST00000396581 PRKNO60260 465 aaPredicted RBP11.9□□□□□ -0.51
TRIM40-207ENST00000396581 STK17BO94768 372 aa11.9□□□□□ -0.51
TRIM40-207ENST00000396581 OR6A2O95222 327 aa11.9□□□□□ -0.51
TRIM40-207ENST00000396581 TPT1P13693 172 aaKnown RBP11.9□□□□□ -0.51
TRIM40-207ENST00000396581 CXCR1P25024 350 aa11.9□□□□□ -0.51
TRIM40-207ENST00000396581 PSMB6P28072 239 aa11.9□□□□□ -0.51
TRIM40-207ENST00000396581 AVPR2P30518 371 aa11.9□□□□□ -0.51
TRIM40-207ENST00000396581 HOXA6P31267 233 aa11.9□□□□□ -0.51
TRIM40-207ENST00000396581 RFC3P40938 356 aa11.9□□□□□ -0.51
TRIM40-207ENST00000396581 DNASE1L1P49184 302 aa11.9□□□□□ -0.51
TRIM40-207ENST00000396581 GSK3AP49840 483 aa11.9□□□□□ -0.51
TRIM40-207ENST00000396581 STK11Q15831 433 aa11.9□□□□□ -0.51
TRIM40-207ENST00000396581 OR10K2Q6IF99 312 aa11.9□□□□□ -0.51
TRIM40-207ENST00000396581 DRAM2Q6UX65 266 aa11.9□□□□□ -0.51
TRIM40-207ENST00000396581 GTPBP8Q8N3Z3 284 aaPredicted RBP11.9□□□□□ -0.51
TRIM40-207ENST00000396581 DMBX1Q8NFW5 382 aa11.9□□□□□ -0.51
TRIM40-207ENST00000396581 OR4K17Q8NGC6 315 aa11.9□□□□□ -0.51
TRIM40-207ENST00000396581 PTPMT1Q8WUK0 201 aaPredicted RBP11.9□□□□□ -0.51
TRIM40-207ENST00000396581 RNF141Q8WVD5 230 aa11.9□□□□□ -0.51
TRIM40-207ENST00000396581 DUSP15Q9H1R2 295 aaPredicted RBP11.9□□□□□ -0.51
TRIM40-207ENST00000396581 CYTL1Q9NRR1 136 aa11.9□□□□□ -0.51
TRIM40-207ENST00000396581 FBLN5Q9UBX5 448 aa11.9□□□□□ -0.51
TRIM40-207ENST00000396581 GTF2A1LQ9UNN4 478 aa11.9□□□□□ -0.51
TRIM40-207ENST00000396581 MUC3AQ02505 3323 aa11.89□□□□□ -0.51
TRIM40-207ENST00000396581 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.89□□□□□ -0.51
TRIM40-207ENST00000396581 LOC107986453A0A1B0GWG9 222 aa11.89□□□□□ -0.51
TRIM40-207ENST00000396581 A0A1W2PQD3 144 aa11.89□□□□□ -0.51
TRIM40-207ENST00000396581 C17orf105B2RV13 164 aa11.89□□□□□ -0.51
TRIM40-207ENST00000396581 ZNF208O43345 1280 aa11.89□□□□□ -0.51
TRIM40-207ENST00000396581 HEXAP06865 529 aa11.89□□□□□ -0.51
TRIM40-207ENST00000396581 LYL1P12980 280 aa11.89□□□□□ -0.51
TRIM40-207ENST00000396581 BCKDHBP21953 392 aa11.89□□□□□ -0.51
TRIM40-207ENST00000396581 FASLGP48023 281 aa11.89□□□□□ -0.51
TRIM40-207ENST00000396581 CX3CR1P49238 355 aa11.89□□□□□ -0.51
TRIM40-207ENST00000396581 RAB13P51153 203 aa11.89□□□□□ -0.51
TRIM40-207ENST00000396581 NXPH1P58417 271 aa11.89□□□□□ -0.51
TRIM40-207ENST00000396581 SPOCK1Q08629 439 aa11.89□□□□□ -0.51
TRIM40-207ENST00000396581 ATXN7L3Q14CW9 347 aaPredicted RBP11.89□□□□□ -0.51
TRIM40-207ENST00000396581 NKPD1Q17RQ9 610 aa11.89□□□□□ -0.51
TRIM40-207ENST00000396581 HAGHLQ6PII5 290 aaPredicted RBP11.89□□□□□ -0.51
TRIM40-207ENST00000396581 ZNF704Q6ZNC4 412 aaPredicted RBP11.89□□□□□ -0.51
TRIM40-207ENST00000396581 TRAPPC6BQ86SZ2 158 aa11.89□□□□□ -0.51
TRIM40-207ENST00000396581 OR13C3Q8NGS6 347 aa11.89□□□□□ -0.51
TRIM40-207ENST00000396581 ARL11Q969Q4 196 aa11.89□□□□□ -0.51
TRIM40-207ENST00000396581 ADIPOR1Q96A54 375 aa11.89□□□□□ -0.51
TRIM40-207ENST00000396581 FOXN4Q96NZ1 517 aa11.89□□□□□ -0.51
TRIM40-207ENST00000396581 CDC6Q99741 560 aa11.89□□□□□ -0.51
TRIM40-207ENST00000396581 GAL3ST1Q99999 423 aa11.89□□□□□ -0.51
TRIM40-207ENST00000396581 RNF126Q9BV68 326 aa11.89□□□□□ -0.51
TRIM40-207ENST00000396581 FN3KRPQ9HA64 309 aa11.89□□□□□ -0.51
TRIM40-207ENST00000396581 CHMP1AQ9HD42 196 aaPredicted RBP11.89□□□□□ -0.51
TRIM40-207ENST00000396581 COA4Q9NYJ1 87 aa11.89□□□□□ -0.51
TRIM40-207ENST00000396581 MLXQ9UH92 298 aa11.89□□□□□ -0.51
TRIM40-207ENST00000396581 FBXO9Q9UK97 447 aaPredicted RBP11.89□□□□□ -0.51
TRIM40-207ENST00000396581 ANAPC10Q9UM13 185 aa11.89□□□□□ -0.51
TRIM40-207ENST00000396581 CEACAM18A8MTB9 384 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 SMAD9O15198 467 aaKnown RBP11.88□□□□□ -0.51
TRIM40-207ENST00000396581 FADS1O60427 444 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 SCGNO76038 276 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 ERCC1P07992 297 aaPredicted RBP11.88□□□□□ -0.51
TRIM40-207ENST00000396581 FAM157CP0CG43 387 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 LIPCP11150 499 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 PGAM2P15259 253 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 HSD11B1P28845 292 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 CRABP1P29762 137 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 CBX5P45973 191 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 SLC6A9P48067 706 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 GABRA4P48169 554 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 TOMM34Q15785 309 aaPredicted RBP11.88□□□□□ -0.51
TRIM40-207ENST00000396581 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.88□□□□□ -0.51
TRIM40-207ENST00000396581 TMEM244Q5VVB8 128 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 ARMC6Q6NXE6 501 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 DEGS2Q6QHC5 323 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 IL34Q6ZMJ4 242 aa11.88□□□□□ -0.51
TRIM40-207ENST00000396581 ZNF761Q86XN6 746 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms