RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 PNLIPP16233 465 aa12.17□□□□□ -0.46
LDB3-202ENST00000361373 PPP3CBP16298 524 aa12.17□□□□□ -0.46
LDB3-202ENST00000361373 NLRC3Q7RTR2 1065 aa12.17□□□□□ -0.46
LDB3-202ENST00000361373 KANSL1Q7Z3B3 1105 aa12.17□□□□□ -0.46
LDB3-202ENST00000361373 ROBO4Q8WZ75 1007 aa12.17□□□□□ -0.46
LDB3-202ENST00000361373 SDSLQ96GA7 329 aa12.17□□□□□ -0.46
LDB3-202ENST00000361373 SIGLEC7Q9Y286 467 aa12.17□□□□□ -0.46
LDB3-202ENST00000361373 SHROOM3Q8TF72 1996 aa12.16□□□□□ -0.46
LDB3-202ENST00000361373 LRRC37AA6NMS7 1700 aa12.16□□□□□ -0.46
LDB3-202ENST00000361373 IFITM5A6NNB3 132 aa12.16□□□□□ -0.46
LDB3-202ENST00000361373 GLRA1P23415 457 aa12.16□□□□□ -0.46
LDB3-202ENST00000361373 THBS4P35443 961 aa12.16□□□□□ -0.46
LDB3-202ENST00000361373 LUMP51884 338 aaPredicted RBP12.16□□□□□ -0.46
LDB3-202ENST00000361373 IAH1Q2TAA2 248 aaPredicted RBP12.16□□□□□ -0.46
LDB3-202ENST00000361373 WIPI1Q5MNZ9 446 aaPredicted RBP12.16□□□□□ -0.46
LDB3-202ENST00000361373 C12orf73Q69YU5 71 aa12.16□□□□□ -0.46
LDB3-202ENST00000361373 TMEM211Q6ICI0 200 aa12.16□□□□□ -0.46
LDB3-202ENST00000361373 ARHGEF39Q8N4T4 335 aa12.16□□□□□ -0.46
LDB3-202ENST00000361373 OR10G3Q8NGC4 313 aa12.16□□□□□ -0.46
LDB3-202ENST00000361373 BANF2Q9H503 90 aa12.16□□□□□ -0.46
LDB3-202ENST00000361373 ZNF768Q9H5H4 540 aaKnown RBP12.16□□□□□ -0.46
LDB3-202ENST00000361373 DNAJB12Q9NXW2 375 aaKnown RBP12.16□□□□□ -0.46
LDB3-202ENST00000361373 ZC3H12DA2A288 527 aaKnown RBP12.16□□□□□ -0.46
LDB3-202ENST00000361373 OR2W5A6NFC9 320 aa12.16□□□□□ -0.46
LDB3-202ENST00000361373 PRKNO60260 465 aaPredicted RBP12.16□□□□□ -0.46
LDB3-202ENST00000361373 DFFBO76075 338 aa12.16□□□□□ -0.46
LDB3-202ENST00000361373 B4GALT1P15291 398 aa12.16□□□□□ -0.46
LDB3-202ENST00000361373 NKX2-5P52952 324 aaPredicted RBP12.16□□□□□ -0.46
LDB3-202ENST00000361373 PWWP2BQ6NUJ5 590 aa12.16□□□□□ -0.46
LDB3-202ENST00000361373 FAM199XQ6PEV8 388 aaPredicted RBP12.16□□□□□ -0.46
LDB3-202ENST00000361373 SCCPDHQ8NBX0 429 aa12.16□□□□□ -0.46
LDB3-202ENST00000361373 OR2AE1Q8NHA4 323 aa12.16□□□□□ -0.46
LDB3-202ENST00000361373 LOXL4Q96JB6 756 aa12.16□□□□□ -0.46
LDB3-202ENST00000361373 CLDN1O95832 211 aa12.16□□□□□ -0.46
LDB3-202ENST00000361373 PMP2P02689 132 aa12.16□□□□□ -0.46
LDB3-202ENST00000361373 SUB1P53999 127 aaKnown RBP eCLIP12.16□□□□□ -0.46
LDB3-202ENST00000361373 EIF4EBP2Q13542 120 aaPredicted RBP12.16□□□□□ -0.46
LDB3-202ENST00000361373 RGS7BPQ6MZT1 257 aaPredicted RBP12.16□□□□□ -0.46
LDB3-202ENST00000361373 Q7L0L9 218 aa12.16□□□□□ -0.46
LDB3-202ENST00000361373 TMEM200AQ86VY9 491 aa12.16□□□□□ -0.46
LDB3-202ENST00000361373 GALNT16Q8N428 558 aa12.16□□□□□ -0.46
LDB3-202ENST00000361373 OR8B4Q96RC9 309 aa12.16□□□□□ -0.46
LDB3-202ENST00000361373 C1QTNF6Q9BXI9 259 aa12.16□□□□□ -0.46
LDB3-202ENST00000361373 SMIM3Q9BZL3 60 aa12.16□□□□□ -0.46
LDB3-202ENST00000361373 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.16□□□□□ -0.46
LDB3-202ENST00000361373 NEU3Q9UQ49 428 aa12.16□□□□□ -0.46
LDB3-202ENST00000361373 C1QAP02745 245 aa12.16□□□□□ -0.46
LDB3-202ENST00000361373 NFYBP25208 207 aa12.16□□□□□ -0.46
LDB3-202ENST00000361373 FUT6P51993 359 aa12.16□□□□□ -0.46
LDB3-202ENST00000361373 HMGA2P52926 109 aa12.16□□□□□ -0.46
LDB3-202ENST00000361373 SSBP1Q04837 148 aaKnown RBP12.16□□□□□ -0.46
LDB3-202ENST00000361373 RAB35Q15286 201 aa12.16□□□□□ -0.46
LDB3-202ENST00000361373 ATPAF1Q5TC12 328 aaPredicted RBP12.16□□□□□ -0.46
LDB3-202ENST00000361373 DRAM2Q6UX65 266 aa12.16□□□□□ -0.46
LDB3-202ENST00000361373 RBMS3Q6XE24 437 aaKnown RBP12.16□□□□□ -0.46
LDB3-202ENST00000361373 OTOSQ8NHW6 89 aa12.16□□□□□ -0.46
LDB3-202ENST00000361373 KTI12Q96EK9 354 aaPredicted RBP12.16□□□□□ -0.46
LDB3-202ENST00000361373 UHRF2Q96PU4 802 aa12.16□□□□□ -0.46
LDB3-202ENST00000361373 C11orf54Q9H0W9 315 aaPredicted RBP12.16□□□□□ -0.46
LDB3-202ENST00000361373 HEYLQ9NQ87 328 aaPredicted RBP12.16□□□□□ -0.46
LDB3-202ENST00000361373 TRAV1-2A0A0B4J238 106 aa12.15□□□□□ -0.46
LDB3-202ENST00000361373 M0QYG6 137 aa12.15□□□□□ -0.46
LDB3-202ENST00000361373 GPX5O75715 221 aa12.15□□□□□ -0.46
LDB3-202ENST00000361373 CHATP28329 748 aa12.15□□□□□ -0.46
LDB3-202ENST00000361373 RFC3P40938 356 aa12.15□□□□□ -0.46
LDB3-202ENST00000361373 UBE2IP63279 158 aaKnown RBP12.15□□□□□ -0.46
LDB3-202ENST00000361373 INSM1Q01101 510 aaPredicted RBP12.15□□□□□ -0.46
LDB3-202ENST00000361373 TCTN1Q2MV58 587 aa12.15□□□□□ -0.46
LDB3-202ENST00000361373 CD300LDQ6UXZ3 194 aa12.15□□□□□ -0.46
LDB3-202ENST00000361373 OR4D6Q8NGJ1 314 aa12.15□□□□□ -0.46
LDB3-202ENST00000361373 A0A1W2PQD3 144 aa12.15□□□□□ -0.46
LDB3-202ENST00000361373 EIF4EP06730 217 aaKnown RBP12.15□□□□□ -0.46
LDB3-202ENST00000361373 MEOX1P50221 254 aa12.15□□□□□ -0.46
LDB3-202ENST00000361373 GP2P55259 537 aaKnown RBP12.15□□□□□ -0.46
LDB3-202ENST00000361373 TLE4Q04727 773 aa12.15□□□□□ -0.46
LDB3-202ENST00000361373 FUT7Q11130 342 aa12.15□□□□□ -0.46
LDB3-202ENST00000361373 TMEM179BQ7Z7N9 219 aa12.15□□□□□ -0.46
LDB3-202ENST00000361373 SLC35G3Q8N808 338 aa12.15□□□□□ -0.46
LDB3-202ENST00000361373 BBS1Q8NFJ9 593 aa12.15□□□□□ -0.46
LDB3-202ENST00000361373 OR1F12Q8NHA8 337 aa12.15□□□□□ -0.46
LDB3-202ENST00000361373 SPSB1Q96BD6 273 aa12.15□□□□□ -0.46
LDB3-202ENST00000361373 TNS1Q9HBL0 1735 aaKnown RBP12.15□□□□□ -0.46
LDB3-202ENST00000361373 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.15□□□□□ -0.46
LDB3-202ENST00000361373 A0A1W2PQF6 199 aa12.15□□□□□ -0.46
LDB3-202ENST00000361373 TERTO14746 1132 aaKnown RBP12.15□□□□□ -0.46
LDB3-202ENST00000361373 CT45A6P0DMU7 189 aa12.15□□□□□ -0.46
LDB3-202ENST00000361373 CT45A5P0DMU8 189 aa12.15□□□□□ -0.46
LDB3-202ENST00000361373 CT45A7P0DMV0 189 aa12.15□□□□□ -0.46
LDB3-202ENST00000361373 CT45A8P0DMV1 189 aa12.15□□□□□ -0.46
LDB3-202ENST00000361373 CT45A9P0DMV2 189 aa12.15□□□□□ -0.46
LDB3-202ENST00000361373 TNFRSF1AP19438 455 aa12.15□□□□□ -0.46
LDB3-202ENST00000361373 CNR1P21554 472 aa12.15□□□□□ -0.46
LDB3-202ENST00000361373 AKR1C1Q04828 323 aa12.15□□□□□ -0.46
LDB3-202ENST00000361373 SMIM21Q3B7S5 101 aa12.15□□□□□ -0.46
LDB3-202ENST00000361373 CT45A2Q5DJT8 189 aa12.15□□□□□ -0.46
LDB3-202ENST00000361373 CT45A1Q5HYN5 189 aa12.15□□□□□ -0.46
LDB3-202ENST00000361373 CD276Q5ZPR3 534 aa12.15□□□□□ -0.46
LDB3-202ENST00000361373 CT45A3Q8NHU0 189 aa12.15□□□□□ -0.46
LDB3-202ENST00000361373 SSUH2Q9Y2M2 353 aa12.15□□□□□ -0.46
LDB3-202ENST00000361373 CHST2Q9Y4C5 530 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms