RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 ELFN2Q5R3F8 820 aa12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 C1orf185Q5T7R7 199 aa12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 BCL2L15Q5TBC7 163 aa12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 FBXW9Q5XUX1 488 aa12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 FAM214BQ7L5A3 538 aa12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 SLC16A14Q7RTX9 510 aa12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 CD163Q86VB7 1156 aa12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 GCNT2Q8N0V5 402 aa12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 C9orf106Q8NAJ2 232 aa12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 IL17RDQ8NFM7 739 aa12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 OR6K3Q8NGY3 331 aa12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 MBD3L2Q8NHZ7 208 aaPredicted RBP12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 MCFD2Q8NI22 146 aa12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 FAM57AQ8TBR7 257 aa12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 FBXO17Q96EF6 278 aa12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 HS3ST6Q96QI5 342 aa12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 OR14A2Q96R54 314 aa12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 KCNJ15Q99712 375 aa12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 ATF6BQ99941 703 aa12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 SLIRPQ9GZT3 109 aaKnown RBP12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 SNTG1Q9NSN8 517 aa12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 MALT1Q9UDY8 824 aa12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 PRSS50Q9UI38 385 aa12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 OR52A1Q9UKL2 312 aa12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 A3GALT2U3KPV4 340 aa12.14□□□□□ -0.47
PDLIM5-203ENST00000359265 ZNF879B4DU55 563 aa12.13□□□□□ -0.47
PDLIM5-203ENST00000359265 SGCEO43556 437 aa12.13□□□□□ -0.47
PDLIM5-203ENST00000359265 DOK2O60496 412 aa12.13□□□□□ -0.47
PDLIM5-203ENST00000359265 APOC1P02654 83 aa12.13□□□□□ -0.47
PDLIM5-203ENST00000359265 UBCP0CG48 685 aaKnown RBP12.13□□□□□ -0.47
PDLIM5-203ENST00000359265 ZNF32P17041 273 aa12.13□□□□□ -0.47
PDLIM5-203ENST00000359265 CALRP27797 417 aaKnown RBP12.13□□□□□ -0.47
PDLIM5-203ENST00000359265 MPGP29372 298 aa12.13□□□□□ -0.47
PDLIM5-203ENST00000359265 RPS19P39019 145 aaKnown RBP12.13□□□□□ -0.47
PDLIM5-203ENST00000359265 UQCRFS1P47985 274 aa12.13□□□□□ -0.47
PDLIM5-203ENST00000359265 RORCP51449 518 aa12.13□□□□□ -0.47
PDLIM5-203ENST00000359265 RPS11P62280 158 aaKnown RBP eCLIP12.13□□□□□ -0.47
PDLIM5-203ENST00000359265 MXD1Q05195 221 aa12.13□□□□□ -0.47
PDLIM5-203ENST00000359265 ECH1Q13011 328 aa12.13□□□□□ -0.47
PDLIM5-203ENST00000359265 ZNF404Q494X3 552 aa12.13□□□□□ -0.47
PDLIM5-203ENST00000359265 Q499Y3 187 aa12.13□□□□□ -0.47
PDLIM5-203ENST00000359265 CCDC92Q53HC0 331 aaPredicted RBP12.13□□□□□ -0.47
PDLIM5-203ENST00000359265 UNQ9370/PRO34162Q6UXP9 181 aa12.13□□□□□ -0.47
PDLIM5-203ENST00000359265 TFAP2EQ6VUC0 442 aa12.13□□□□□ -0.47
PDLIM5-203ENST00000359265 ZNF704Q6ZNC4 412 aaPredicted RBP12.13□□□□□ -0.47
PDLIM5-203ENST00000359265 LINC00299Q6ZSB3 139 aa12.13□□□□□ -0.47
PDLIM5-203ENST00000359265 ZNF627Q7L945 461 aa12.13□□□□□ -0.47
PDLIM5-203ENST00000359265 ZNF283Q8N7M2 679 aa12.13□□□□□ -0.47
PDLIM5-203ENST00000359265 GPR148Q8TDV2 347 aa12.13□□□□□ -0.47
PDLIM5-203ENST00000359265 TSEN15Q8WW01 171 aaKnown RBP12.13□□□□□ -0.47
PDLIM5-203ENST00000359265 RGP1Q92546 391 aaPredicted RBP12.13□□□□□ -0.47
PDLIM5-203ENST00000359265 ZFP3Q96NJ6 502 aa12.13□□□□□ -0.47
PDLIM5-203ENST00000359265 DACH2Q96NX9 599 aa12.13□□□□□ -0.47
PDLIM5-203ENST00000359265 SH3GL3Q99963 347 aa12.13□□□□□ -0.47
PDLIM5-203ENST00000359265 G6PC2Q9NQR9 355 aa12.13□□□□□ -0.47
PDLIM5-203ENST00000359265 FAM206AQ9NX38 181 aa12.13□□□□□ -0.47
PDLIM5-203ENST00000359265 PLEK2Q9NYT0 353 aa12.13□□□□□ -0.47
PDLIM5-203ENST00000359265 SLC22A13Q9Y226 551 aa12.13□□□□□ -0.47
PDLIM5-203ENST00000359265 TRBV5-5A0A0J9YX44 114 aa12.12□□□□□ -0.47
PDLIM5-203ENST00000359265 DVL2O14641 736 aa12.12□□□□□ -0.47
PDLIM5-203ENST00000359265 AGFG2O95081 481 aa12.12□□□□□ -0.47
PDLIM5-203ENST00000359265 CNOT4O95628 575 aaKnown RBP12.12□□□□□ -0.47
PDLIM5-203ENST00000359265 CRHP06850 196 aa12.12□□□□□ -0.47
PDLIM5-203ENST00000359265 UCHL1P09936 223 aa12.12□□□□□ -0.47
PDLIM5-203ENST00000359265 ACHEP22303 614 aa12.12□□□□□ -0.47
PDLIM5-203ENST00000359265 CTSSP25774 331 aa12.12□□□□□ -0.47
PDLIM5-203ENST00000359265 CX3CR1P49238 355 aa12.12□□□□□ -0.47
PDLIM5-203ENST00000359265 PER3P56645 1201 aa12.12□□□□□ -0.47
PDLIM5-203ENST00000359265 HNRNPA0Q13151 305 aaKnown RBP12.12□□□□□ -0.47
PDLIM5-203ENST00000359265 SLC36A2Q495M3 483 aa12.12□□□□□ -0.47
PDLIM5-203ENST00000359265 HSD17B12Q53GQ0 312 aa12.12□□□□□ -0.47
PDLIM5-203ENST00000359265 PRR30Q53SZ7 412 aaPredicted RBP12.12□□□□□ -0.47
PDLIM5-203ENST00000359265 C9orf135Q5VTT2 229 aa12.12□□□□□ -0.47
PDLIM5-203ENST00000359265 TMEM244Q5VVB8 128 aa12.12□□□□□ -0.47
PDLIM5-203ENST00000359265 DPPA2Q7Z7J5 298 aa12.12□□□□□ -0.47
PDLIM5-203ENST00000359265 TPRA1Q86W33 373 aa12.12□□□□□ -0.47
PDLIM5-203ENST00000359265 SKA3Q8IX90 412 aa12.12□□□□□ -0.47
PDLIM5-203ENST00000359265 CNEP1R1Q8N9A8 125 aa12.12□□□□□ -0.47
PDLIM5-203ENST00000359265 TBC1D15Q8TC07 691 aa12.12□□□□□ -0.47
PDLIM5-203ENST00000359265 SPTSSAQ969W0 71 aa12.12□□□□□ -0.47
PDLIM5-203ENST00000359265 SLC25A46Q96AG3 418 aa12.12□□□□□ -0.47
PDLIM5-203ENST00000359265 DERL3Q96Q80 235 aa12.12□□□□□ -0.47
PDLIM5-203ENST00000359265 MMP27Q9H306 513 aa12.12□□□□□ -0.47
PDLIM5-203ENST00000359265 TP63Q9H3D4 680 aaPredicted RBP12.12□□□□□ -0.47
PDLIM5-203ENST00000359265 NUFIP1Q9UHK0 495 aaKnown RBP12.12□□□□□ -0.47
PDLIM5-203ENST00000359265 SLC5A6Q9Y289 635 aa12.12□□□□□ -0.47
PDLIM5-203ENST00000359265 TIMM10BQ9Y5J6 103 aa12.12□□□□□ -0.47
PDLIM5-203ENST00000359265 TRAV1-2A0A0B4J238 106 aa12.11□□□□□ -0.47
PDLIM5-203ENST00000359265 ACOD1A6NK06 481 aa12.11□□□□□ -0.47
PDLIM5-203ENST00000359265 SYNGR3O43761 229 aa12.11□□□□□ -0.47
PDLIM5-203ENST00000359265 ISG15P05161 165 aa12.11□□□□□ -0.47
PDLIM5-203ENST00000359265 CLEC2LP0C7M8 214 aa12.11□□□□□ -0.47
PDLIM5-203ENST00000359265 OCM2P0CE71 109 aa12.11□□□□□ -0.47
PDLIM5-203ENST00000359265 PRKXP51817 358 aa12.11□□□□□ -0.47
PDLIM5-203ENST00000359265 ZNF121P58317 390 aaPredicted RBP12.11□□□□□ -0.47
PDLIM5-203ENST00000359265 ODF4Q2M2E3 257 aa12.11□□□□□ -0.47
PDLIM5-203ENST00000359265 FAM27D1Q5T7N8 215 aa12.11□□□□□ -0.47
PDLIM5-203ENST00000359265 ANKRD16Q6P6B7 361 aa12.11□□□□□ -0.47
PDLIM5-203ENST00000359265 ELMOD2Q8IZ81 293 aa12.11□□□□□ -0.47
PDLIM5-203ENST00000359265 OR1F12Q8NHA8 337 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms