RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 TIMM10BQ9Y5J6 103 aa16.73■□□□□ 0.27
SCARF1-202ENST00000348987 MRPS18BQ9Y676 258 aaKnown RBP16.73■□□□□ 0.27
SCARF1-202ENST00000348987 NUP210LQ5VU65 1888 aa16.73■□□□□ 0.27
SCARF1-202ENST00000348987 TRBV6-7A0A0A0MS04 114 aa16.73■□□□□ 0.27
SCARF1-202ENST00000348987 FAM157AC9JC47 383 aa16.73■□□□□ 0.27
SCARF1-202ENST00000348987 PHYHO14832 338 aa16.73■□□□□ 0.27
SCARF1-202ENST00000348987 STK17BO94768 372 aa16.73■□□□□ 0.27
SCARF1-202ENST00000348987 CD2P06729 351 aa16.73■□□□□ 0.27
SCARF1-202ENST00000348987 CFPP27918 469 aa16.73■□□□□ 0.27
SCARF1-202ENST00000348987 HTR2CP28335 458 aa16.73■□□□□ 0.27
SCARF1-202ENST00000348987 FIP1L1Q6UN15 594 aaKnown RBP16.73■□□□□ 0.27
SCARF1-202ENST00000348987 RNF44Q7L0R7 432 aa16.73■□□□□ 0.27
SCARF1-202ENST00000348987 CSNK1A1LQ8N752 337 aa16.73■□□□□ 0.27
SCARF1-202ENST00000348987 BAHD1Q8TBE0 780 aaPredicted RBP16.73■□□□□ 0.27
SCARF1-202ENST00000348987 NKD1Q969G9 470 aa16.73■□□□□ 0.27
SCARF1-202ENST00000348987 SAT2Q96F10 170 aaPredicted RBP16.73■□□□□ 0.27
SCARF1-202ENST00000348987 SLC22A13Q9Y226 551 aa16.73■□□□□ 0.27
SCARF1-202ENST00000348987 WIF1Q9Y5W5 379 aa16.73■□□□□ 0.27
SCARF1-202ENST00000348987 AP4M1O00189 453 aa16.72■□□□□ 0.27
SCARF1-202ENST00000348987 EFSO43281 561 aa16.72■□□□□ 0.27
SCARF1-202ENST00000348987 RAB5AP20339 215 aa16.72■□□□□ 0.27
SCARF1-202ENST00000348987 ZNF10P21506 573 aaPredicted RBP16.72■□□□□ 0.27
SCARF1-202ENST00000348987 DEFA6Q01524 100 aa16.72■□□□□ 0.27
SCARF1-202ENST00000348987 SGCAQ16586 387 aa16.72■□□□□ 0.27
SCARF1-202ENST00000348987 AWAT1Q58HT5 328 aa16.72■□□□□ 0.27
SCARF1-202ENST00000348987 C4orf45Q96LM5 186 aa16.72■□□□□ 0.27
SCARF1-202ENST00000348987 DCBLD2Q96PD2 775 aa16.72■□□□□ 0.27
SCARF1-202ENST00000348987 OR5AC2Q9NZP5 309 aa16.72■□□□□ 0.27
SCARF1-202ENST00000348987 KCNG2Q9UJ96 466 aa16.72■□□□□ 0.27
SCARF1-202ENST00000348987 CFAP54Q96N23 3096 aa16.72■□□□□ 0.27
SCARF1-202ENST00000348987 HEATR5AQ86XA9 2040 aa16.72■□□□□ 0.27
SCARF1-202ENST00000348987 DCDC2BA2VCK2 349 aa16.72■□□□□ 0.27
SCARF1-202ENST00000348987 TGFBR3LH3BV60 316 aa16.72■□□□□ 0.27
SCARF1-202ENST00000348987 TNFRSF4P43489 277 aa16.72■□□□□ 0.27
SCARF1-202ENST00000348987 HTR5AP47898 357 aa16.72■□□□□ 0.27
SCARF1-202ENST00000348987 RAB2AP61019 212 aa16.72■□□□□ 0.27
SCARF1-202ENST00000348987 Q3ZCU0 254 aa16.72■□□□□ 0.27
SCARF1-202ENST00000348987 FAM24BQ8N5W8 94 aa16.72■□□□□ 0.27
SCARF1-202ENST00000348987 ACBD4Q8NC06 268 aa16.72■□□□□ 0.27
SCARF1-202ENST00000348987 SGK3Q96BR1 496 aa16.72■□□□□ 0.27
SCARF1-202ENST00000348987 MRGPRX1Q96LB2 322 aa16.72■□□□□ 0.27
SCARF1-202ENST00000348987 CMKLR1Q99788 373 aa16.72■□□□□ 0.27
SCARF1-202ENST00000348987 OCSTAMPQ9BR26 566 aa16.72■□□□□ 0.27
SCARF1-202ENST00000348987 TWSG1Q9GZX9 223 aa16.72■□□□□ 0.27
SCARF1-202ENST00000348987 CLEC1BQ9P126 229 aa16.72■□□□□ 0.27
SCARF1-202ENST00000348987 C7orf77A4D0Y5 90 aa16.71■□□□□ 0.27
SCARF1-202ENST00000348987 NPIPB9F8W1W9 429 aa16.71■□□□□ 0.27
SCARF1-202ENST00000348987 ST8SIA5O15466 376 aa16.71■□□□□ 0.27
SCARF1-202ENST00000348987 DOK2O60496 412 aa16.71■□□□□ 0.27
SCARF1-202ENST00000348987 FBXO24O75426 580 aa16.71■□□□□ 0.27
SCARF1-202ENST00000348987 NKX2-2O95096 273 aa16.71■□□□□ 0.27
SCARF1-202ENST00000348987 DUS4LO95620 317 aaKnown RBP16.71■□□□□ 0.27
SCARF1-202ENST00000348987 F13BP05160 661 aa16.71■□□□□ 0.27
SCARF1-202ENST00000348987 S1PR1P21453 382 aa16.71■□□□□ 0.27
SCARF1-202ENST00000348987 RASGEF1BQ0VAM2 473 aa16.71■□□□□ 0.27
SCARF1-202ENST00000348987 ERV3-1Q14264 604 aa16.71■□□□□ 0.27
SCARF1-202ENST00000348987 MEF2DQ14814 521 aa16.71■□□□□ 0.27
SCARF1-202ENST00000348987 EXD3Q8N9H8 876 aa16.71■□□□□ 0.27
SCARF1-202ENST00000348987 SLC39A7Q92504 469 aa16.71■□□□□ 0.27
SCARF1-202ENST00000348987 PRAMEF26H0Y7S4 382 aa16.71■□□□□ 0.27
SCARF1-202ENST00000348987 OR10H2O60403 315 aa16.71■□□□□ 0.27
SCARF1-202ENST00000348987 ALOX5APP20292 161 aa16.71■□□□□ 0.27
SCARF1-202ENST00000348987 ZNF563Q8TA94 476 aa16.71■□□□□ 0.27
SCARF1-202ENST00000348987 ELSPBP1Q96BH3 223 aa16.71■□□□□ 0.27
SCARF1-202ENST00000348987 ZNF775Q96BV0 537 aaPredicted RBP16.71■□□□□ 0.27
SCARF1-202ENST00000348987 SPACA7Q96KW9 195 aa16.71■□□□□ 0.27
SCARF1-202ENST00000348987 DBX1A6NMT0 343 aa16.7■□□□□ 0.26
SCARF1-202ENST00000348987 GPR37O15354 613 aa16.7■□□□□ 0.26
SCARF1-202ENST00000348987 NME1P15531 152 aaKnown RBP16.7■□□□□ 0.26
SCARF1-202ENST00000348987 GLP1RP43220 463 aa16.7■□□□□ 0.26
SCARF1-202ENST00000348987 ARRB1P49407 418 aaPredicted RBP16.7■□□□□ 0.26
SCARF1-202ENST00000348987 CDPF1Q6NVV7 123 aa16.7■□□□□ 0.26
SCARF1-202ENST00000348987 DBX2Q6ZNG2 339 aa16.7■□□□□ 0.26
SCARF1-202ENST00000348987 PPP1R3BQ86XI6 285 aa16.7■□□□□ 0.26
SCARF1-202ENST00000348987 NMES1Q9C002 83 aa16.7■□□□□ 0.26
SCARF1-202ENST00000348987 TOLLIPQ9H0E2 274 aa16.7■□□□□ 0.26
SCARF1-202ENST00000348987 FN3KRPQ9HA64 309 aa16.7■□□□□ 0.26
SCARF1-202ENST00000348987 SLC2A8Q9NY64 477 aa16.7■□□□□ 0.26
SCARF1-202ENST00000348987 TREM2Q9NZC2 230 aa16.7■□□□□ 0.26
SCARF1-202ENST00000348987 SPACA6W5XKT8 324 aa16.7■□□□□ 0.26
SCARF1-202ENST00000348987 ARG1P05089 322 aa16.7■□□□□ 0.26
SCARF1-202ENST00000348987 SLC6A9P48067 706 aa16.7■□□□□ 0.26
SCARF1-202ENST00000348987 DVL1P1P54792 670 aaPredicted RBP16.7■□□□□ 0.26
SCARF1-202ENST00000348987 TOMM20Q15388 145 aa16.7■□□□□ 0.26
SCARF1-202ENST00000348987 KLHL26Q53HC5 615 aa16.7■□□□□ 0.26
SCARF1-202ENST00000348987 TMEM225Q6GV28 225 aa16.7■□□□□ 0.26
SCARF1-202ENST00000348987 FJX1Q86VR8 437 aa16.7■□□□□ 0.26
SCARF1-202ENST00000348987 ZDHHC22Q8N966 263 aa16.7■□□□□ 0.26
SCARF1-202ENST00000348987 PRR13Q9NZ81 148 aa16.7■□□□□ 0.26
SCARF1-202ENST00000348987 A0A1B0GV90 55 aa16.69■□□□□ 0.26
SCARF1-202ENST00000348987 M0R036 132 aa16.69■□□□□ 0.26
SCARF1-202ENST00000348987 OIP5O43482 229 aa16.69■□□□□ 0.26
SCARF1-202ENST00000348987 ADAP1O75689 374 aa16.69■□□□□ 0.26
SCARF1-202ENST00000348987 OR8U9P0C7N5 309 aa16.69■□□□□ 0.26
SCARF1-202ENST00000348987 HRH1P35367 487 aa16.69■□□□□ 0.26
SCARF1-202ENST00000348987 GSK3AP49840 483 aa16.69■□□□□ 0.26
SCARF1-202ENST00000348987 CTXN1P60606 82 aa16.69■□□□□ 0.26
SCARF1-202ENST00000348987 PRPS1P60891 318 aa16.69■□□□□ 0.26
SCARF1-202ENST00000348987 RPL7L1Q6DKI1 246 aaKnown RBP16.69■□□□□ 0.26
SCARF1-202ENST00000348987 BTNL8Q6UX41 500 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms