RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 PDLIM3Q53GG5 364 aaPredicted RBP7.46□□□□□ -1.22
TPM3-201ENST00000271850 ZMAT1Q5H9K5 638 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 CORO6Q6QEF8 472 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 COLCA1Q6ZS62 124 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 KLHL36Q8N4N3 616 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 FAM86B1Q8N7N1 296 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 C19orf18Q8NEA5 215 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 OR8G5Q8NG78 346 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 OR1F12Q8NHA8 337 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 FNDC8Q8TC99 324 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 PTP4A1Q93096 173 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 FAM46AQ96IP4 442 aaKnown RBP7.46□□□□□ -1.22
TPM3-201ENST00000271850 HSH2DQ96JZ2 352 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 ZNF570Q96NI8 536 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 SH3GL1Q99961 368 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 SLC30A2Q9BRI3 323 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 CDADC1Q9BWV3 514 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 NUAK2Q9H093 628 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 PRDM13Q9H4Q3 707 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 WDR76Q9H967 626 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 NMNAT1Q9HAN9 279 aaPredicted RBP7.46□□□□□ -1.22
TPM3-201ENST00000271850 PNRC2Q9NPJ4 139 aaKnown RBP7.46□□□□□ -1.22
TPM3-201ENST00000271850 NRIP3Q9NQ35 241 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 CTSZQ9UBR2 303 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 DOCK11Q5JSL3 2073 aa7.45□□□□□ -1.22
TPM3-201ENST00000271850 IGLV1-36A0A0B4J1U3 117 aa7.45□□□□□ -1.22
TPM3-201ENST00000271850 TRBV4-1A0A0J9YWV2 114 aa7.45□□□□□ -1.22
TPM3-201ENST00000271850 HTR3EA5X5Y0 456 aa7.45□□□□□ -1.22
TPM3-201ENST00000271850 IQCF6A8MYZ5 107 aa7.45□□□□□ -1.22
TPM3-201ENST00000271850 CXCR6O00574 342 aa7.45□□□□□ -1.22
TPM3-201ENST00000271850 IFNW1P05000 195 aa7.45□□□□□ -1.22
TPM3-201ENST00000271850 PPIAL4GP0DN37 164 aa7.45□□□□□ -1.22
TPM3-201ENST00000271850 H2AFXP16104 143 aaPredicted RBP7.45□□□□□ -1.22
TPM3-201ENST00000271850 SDHAP31040 664 aa7.45□□□□□ -1.22
TPM3-201ENST00000271850 LSM6P62312 80 aaKnown RBP7.45□□□□□ -1.22
TPM3-201ENST00000271850 DEFA6Q01524 100 aa7.45□□□□□ -1.22
TPM3-201ENST00000271850 GUCY1A3Q02108 690 aa7.45□□□□□ -1.22
TPM3-201ENST00000271850 LIPEQ05469 1076 aa7.45□□□□□ -1.22
TPM3-201ENST00000271850 KCNMB1Q16558 191 aa7.45□□□□□ -1.22
TPM3-201ENST00000271850 DEFB112Q30KQ8 113 aa7.45□□□□□ -1.22
TPM3-201ENST00000271850 ANKDD1AQ495B1 522 aa7.45□□□□□ -1.22
TPM3-201ENST00000271850 ESCO2Q56NI9 601 aa7.45□□□□□ -1.22
TPM3-201ENST00000271850 CLEC12AQ5QGZ9 265 aa7.45□□□□□ -1.22
TPM3-201ENST00000271850 RUSC1-AS1Q66K80 236 aa7.45□□□□□ -1.22
TPM3-201ENST00000271850 UNQ6126/PRO20091Q6UXV3 157 aa7.45□□□□□ -1.22
TPM3-201ENST00000271850 BRD3OSQ6XYD6 125 aa7.45□□□□□ -1.22
TPM3-201ENST00000271850 ZNF730Q6ZMV8 503 aa7.45□□□□□ -1.22
TPM3-201ENST00000271850 CFAP77Q6ZQR2 320 aa7.45□□□□□ -1.22
TPM3-201ENST00000271850 NAA40Q86UY6 237 aa7.45□□□□□ -1.22
TPM3-201ENST00000271850 MOGAT3Q86VF5 341 aa7.45□□□□□ -1.22
TPM3-201ENST00000271850 TREML1Q86YW5 311 aa7.45□□□□□ -1.22
TPM3-201ENST00000271850 RNF113BQ8IZP6 322 aaKnown RBP7.45□□□□□ -1.22
TPM3-201ENST00000271850 FITM2Q8N6M3 262 aa7.45□□□□□ -1.22
TPM3-201ENST00000271850 PCYOX1LQ8NBM8 494 aa7.45□□□□□ -1.22
TPM3-201ENST00000271850 BHLHE23Q8NDY6 225 aa7.45□□□□□ -1.22
TPM3-201ENST00000271850 OR52E2Q8NGJ4 325 aa7.45□□□□□ -1.22
TPM3-201ENST00000271850 WACQ9BTA9 647 aa7.45□□□□□ -1.22
TPM3-201ENST00000271850 MRI1Q9BV20 369 aa7.45□□□□□ -1.22
TPM3-201ENST00000271850 FNDC11Q9BVV2 318 aa7.45□□□□□ -1.22
TPM3-201ENST00000271850 SSBP3Q9BWW4 388 aaPredicted RBP7.45□□□□□ -1.22
TPM3-201ENST00000271850 GRHPRQ9UBQ7 328 aa7.45□□□□□ -1.22
TPM3-201ENST00000271850 LRCH1Q9Y2L9 728 aa7.45□□□□□ -1.22
TPM3-201ENST00000271850 SOCS2O14508 198 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 TNFRSF13BO14836 293 aaPredicted RBP7.44□□□□□ -1.22
TPM3-201ENST00000271850 HOXA3O43365 443 aaPredicted RBP7.44□□□□□ -1.22
TPM3-201ENST00000271850 KHDRBS3O75525 346 aaKnown RBP7.44□□□□□ -1.22
TPM3-201ENST00000271850 DIRAS1O95057 198 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 PPP1R3DO95685 299 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 ZNF682O95780 498 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 TXNDC12O95881 172 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 SERPINA1P01009 418 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 IFNA14P01570 189 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 SFTPBP07988 381 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 MMP9P14780 707 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 RPS2P15880 293 aaKnown RBP7.44□□□□□ -1.22
TPM3-201ENST00000271850 NCK1P16333 377 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 TUBG1P23258 451 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 TNFSF4P23510 183 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 RPL4P36578 427 aaKnown RBP7.44□□□□□ -1.22
TPM3-201ENST00000271850 PSMB10P40306 273 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 GSK3BP49841 420 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 SLC7A2P52569 658 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 MPPED2Q15777 294 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 ZNF181Q2M3W8 571 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 IFI44LQ53G44 452 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 PRAMEF6Q5VXH4 476 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 SLC27A4Q6P1M0 643 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 ARL9Q6T311 187 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 RHOUQ7L0Q8 258 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 ZER1Q7Z7L7 766 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 GLB1L2Q8IW92 636 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 OR6V1Q8N148 313 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 MUC20Q8N307 709 aaPredicted RBP7.44□□□□□ -1.22
TPM3-201ENST00000271850 ATG16L2Q8NAA4 619 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 PLPP7Q8NBV4 271 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 OR10S1Q8NGN2 331 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 ZNRF4Q8WWF5 429 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 WFDC12Q8WWY7 111 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 RAB40AQ8WXH6 277 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 TMIGD2Q96BF3 282 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms