RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 MTHFD2LQ9H903 347 aaPredicted RBP4.25□□□□□ -1.73
LINC00550-201ENST00000629293 SNTG1Q9NSN8 517 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 C19orf53Q9UNZ5 99 aaPredicted RBP4.25□□□□□ -1.73
LINC00550-201ENST00000629293 SPIN1Q9Y657 262 aaPredicted RBP4.25□□□□□ -1.73
LINC00550-201ENST00000629293 CHD3Q12873 2000 aaKnown RBP4.25□□□□□ -1.73
LINC00550-201ENST00000629293 TRDV1A0A1B0GX56 115 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 OR2M5A3KFT3 312 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 SNTNA6NMZ2 147 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 CDC42EP2O14613 210 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 AP3D1O14617 1153 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 ZIC3O60481 467 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 CDRT1O95170 752 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 LALBAP00709 142 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 ATP1B1P05026 303 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 IL7P13232 177 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 ZNF708P17019 499 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 S1PR1P21453 382 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 CRYGSP22914 178 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 HTR2AP28223 471 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 ACVR1BP36896 505 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 PTGDSP41222 190 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 PPICP45877 212 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 EMDP50402 254 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 CDH11P55287 796 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 HOXC5Q00444 222 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 FABP5Q01469 135 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 HNRNPA0Q13151 305 aaKnown RBP4.25□□□□□ -1.73
LINC00550-201ENST00000629293 ASAH1Q13510 395 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 BCL2A1Q16548 175 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 BAK1Q16611 211 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 AGAP6Q5VW22 663 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 NXNL2Q5VZ03 156 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 C22orf42Q6IC83 251 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 TMPRSS11AQ6ZMR5 421 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 MARCH3Q86UD3 253 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 NRMQ8IXM6 262 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 SYT14Q8NB59 555 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 NUDT10Q8NFP7 164 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 OR7G1Q8NGA0 311 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 OR52N1Q8NH53 320 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 ST8SIA4Q92187 359 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 AKAP1Q92667 903 aaKnown RBP eCLIP4.25□□□□□ -1.73
LINC00550-201ENST00000629293 NEUROG1Q92886 237 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 UFD1Q92890 307 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 HGDQ93099 445 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 TRIM63Q969Q1 353 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 NUDT11Q96G61 164 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 CEP19Q96LK0 163 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 KCTD7Q96MP8 289 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 SDF2Q99470 211 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 COQ7Q99807 217 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 KATNB1Q9BVA0 655 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 TBL1XR1Q9BZK7 514 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 OR2B2Q9GZK3 357 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 ACTR6Q9GZN1 396 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 HOXD1Q9GZZ0 328 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 PIGUQ9H490 435 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 PTGES2Q9H7Z7 377 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 FLRT3Q9NZU0 649 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 GRIP1Q9Y3R0 1128 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 CXCL13O43927 109 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 FMO6PO60774 539 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 CRLF1O75462 422 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 ACTL6BO94805 426 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 NUDT14O95848 222 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 HLA-DQB1P01920 261 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 GALP22466 123 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 SFTPDP35247 375 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 GPR4P46093 362 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 KCNJ8Q15842 424 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 MAPK14Q16539 360 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 BEX5Q5H9J7 111 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 ADAM5Q6NVV9 412 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 WDR88Q6ZMY6 472 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 ADGRE4PQ86SQ3 457 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 BBS1Q8NFJ9 593 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 SPATA3Q8NHX4 192 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 RFKQ969G6 155 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 HS6ST2Q96MM7 605 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 DCLRE1CQ96SD1 692 aaKnown RBP4.25□□□□□ -1.73
LINC00550-201ENST00000629293 GPHA2Q96T91 129 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 STACQ99469 402 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 NELFAQ9H3P2 528 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 HINT3Q9NQE9 182 aaKnown RBP4.25□□□□□ -1.73
LINC00550-201ENST00000629293 DUSP22Q9NRW4 184 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 KCNE5Q9UJ90 142 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 WDR45Q9Y484 360 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 CUBNO60494 3623 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 A0A1W2PQ09 198 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 BHLHE40O14503 412 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 APOA1P02647 267 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 GRPP07492 148 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 TSPAN19P0C672 248 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 CT45A8P0DMV1 189 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 CT45A9P0DMV2 189 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 GYPEP15421 78 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 NAGAP17050 411 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 IFNA8P32881 189 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 SDC2P34741 201 aa4.24□□□□□ -1.73
LINC00550-201ENST00000629293 EVI2BP34910 448 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms