RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 GRIN2DO15399 1336 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 PTPRJQ12913 1337 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 A0A087X0T9 212 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 LRRN3E7EW58 273 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 H0YL77 283 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 PANO1I0J062 215 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 BTN3A3O00478 584 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 LIN7AO14910 233 aaPredicted RBP3.54□□□□□ -1.84
NUP88-213ENST00000576862 TOX3O15405 576 aaPredicted RBP3.54□□□□□ -1.84
NUP88-213ENST00000576862 RS1O15537 224 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 B4GALT5O43286 388 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 EMC8O43402 210 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 OR10H3O60404 316 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 N4BP1O75113 896 aaKnown RBP3.54□□□□□ -1.84
NUP88-213ENST00000576862 ANP32DO95626 131 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 IFNA6P05013 189 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 SERPINE2P07093 398 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 OR4E1P0C645 316 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 FAM228BP0C875 321 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 CCDC166P0CW27 439 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 TNNI1P19237 187 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 M6PRP20645 277 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 PRPS1L1P21108 318 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 S100A1P23297 94 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 MMP11P24347 488 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 STOMP27105 288 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 MAGEA2P43356 314 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 NPBWR2P48146 333 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 ACOT2P49753 483 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 ACTBP60709 375 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 ACTA2P62736 377 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 RPL10AP62906 217 aaKnown RBP3.54□□□□□ -1.84
NUP88-213ENST00000576862 ACTG1P63261 375 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 ACTG2P63267 376 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 ACTC1P68032 377 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 ACTA1P68133 377 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 REEP5Q00765 189 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 SMARCB1Q12824 385 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 STX3Q13277 289 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 ITIH4Q14624 930 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 SPA17Q15506 151 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 COQ5Q5HYK3 327 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 LIPNQ5VXI9 398 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 DMKNQ6E0U4 476 aaPredicted RBP3.54□□□□□ -1.84
NUP88-213ENST00000576862 CLEC18BQ6UXF7 455 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 H2BFWTQ7Z2G1 175 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 PID1Q7Z2X4 250 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 P4HA3Q7Z4N8 544 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 NET1Q7Z628 596 aaPredicted RBP3.54□□□□□ -1.84
NUP88-213ENST00000576862 GID4Q8IVV7 300 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 SLC35F6Q8N357 371 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 CADM2Q8N3J6 435 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 TBC1D19Q8N5T2 526 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 OR2L5Q8NG80 312 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 OR2L3Q8NG85 312 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 LZICQ8WZA0 190 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 ART4Q93070 314 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 C9orf72Q96LT7 481 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 ZNF578Q96N58 590 aaPredicted RBP3.54□□□□□ -1.84
NUP88-213ENST00000576862 TGM7Q96PF1 710 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 TMEM246Q9BRR3 403 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 PARD6BQ9BYG5 372 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 LRRN3Q9H3W5 708 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 FOLH1BQ9HBA9 442 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 SLC40A1Q9NP59 571 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 DYRK4Q9NR20 520 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 MRPL39Q9NYK5 338 aaKnown RBP3.54□□□□□ -1.84
NUP88-213ENST00000576862 EHFQ9NZC4 300 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 P2RX2Q9UBL9 471 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 DNAJC12Q9UKB3 198 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 GUCA1BQ9UMX6 200 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 COQ4Q9Y3A0 265 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 L3MBTL1Q9Y468 752 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 WDR45Q9Y484 360 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 MYH7BA7E2Y1 1941 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 MYH6P13533 1939 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 MYH8P13535 1937 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 SBF1O95248 1867 aa3.54□□□□□ -1.84
NUP88-213ENST00000576862 PPIAL4CA0A0B4J2A2 164 aa3.53□□□□□ -1.84
NUP88-213ENST00000576862 A0A1B0GTI1 187 aa3.53□□□□□ -1.84
NUP88-213ENST00000576862 ZNF233A6NK53 670 aa3.53□□□□□ -1.84
NUP88-213ENST00000576862 H0YJX3 145 aa3.53□□□□□ -1.84
NUP88-213ENST00000576862 MKRN2OSH3BPM6 223 aa3.53□□□□□ -1.84
NUP88-213ENST00000576862 KLRC4-KLRK1H3BQV0 150 aa3.53□□□□□ -1.84
NUP88-213ENST00000576862 DYNC1I1O14576 645 aa3.53□□□□□ -1.84
NUP88-213ENST00000576862 RAB29O14966 203 aa3.53□□□□□ -1.84
NUP88-213ENST00000576862 OR1F1O43749 312 aa3.53□□□□□ -1.84
NUP88-213ENST00000576862 NEBLO76041 1014 aa3.53□□□□□ -1.84
NUP88-213ENST00000576862 VAPBO95292 243 aa3.53□□□□□ -1.84
NUP88-213ENST00000576862 CST4P01036 141 aa3.53□□□□□ -1.84
NUP88-213ENST00000576862 JCHAINP01591 159 aa3.53□□□□□ -1.84
NUP88-213ENST00000576862 RPN2P04844 631 aa3.53□□□□□ -1.84
NUP88-213ENST00000576862 RPS17P08708 135 aaKnown RBP3.53□□□□□ -1.84
NUP88-213ENST00000576862 CD3GP09693 182 aa3.53□□□□□ -1.84
NUP88-213ENST00000576862 HSMCR30P0CW71 290 aa3.53□□□□□ -1.84
NUP88-213ENST00000576862 PPIAL4GP0DN37 164 aa3.53□□□□□ -1.84
NUP88-213ENST00000576862 PSKH1P11801 424 aa3.53□□□□□ -1.84
NUP88-213ENST00000576862 PSMB1P20618 241 aaKnown RBP3.53□□□□□ -1.84
NUP88-213ENST00000576862 PCMT1P22061 227 aa3.53□□□□□ -1.84
NUP88-213ENST00000576862 ALDH3A1P30838 453 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms