RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 GPR160Q9UJ42 338 aa13.75□□□□□ -0.21
CDC42BPB-203ENST00000558867 ZNF346Q9UL40 294 aaKnown RBP13.75□□□□□ -0.21
CDC42BPB-203ENST00000558867 IGKV1D-42A0A075B6H8 117 aa13.74□□□□□ -0.21
CDC42BPB-203ENST00000558867 ZNF99A8MXY4 864 aaPredicted RBP13.74□□□□□ -0.21
CDC42BPB-203ENST00000558867 M0R3G1 203 aa13.74□□□□□ -0.21
CDC42BPB-203ENST00000558867 TSPAN19P0C672 248 aa13.74□□□□□ -0.21
CDC42BPB-203ENST00000558867 CD79AP11912 226 aa13.74□□□□□ -0.21
CDC42BPB-203ENST00000558867 GLRXP35754 106 aa13.74□□□□□ -0.21
CDC42BPB-203ENST00000558867 TMBIM6P55061 237 aa13.74□□□□□ -0.21
CDC42BPB-203ENST00000558867 SELENOVP59797 346 aa13.74□□□□□ -0.21
CDC42BPB-203ENST00000558867 TMED1Q13445 227 aa13.74□□□□□ -0.21
CDC42BPB-203ENST00000558867 NEDD8Q15843 81 aa13.74□□□□□ -0.21
CDC42BPB-203ENST00000558867 GSG1Q2KHT4 349 aa13.74□□□□□ -0.21
CDC42BPB-203ENST00000558867 CNPY1Q3B7I2 92 aa13.74□□□□□ -0.21
CDC42BPB-203ENST00000558867 ELFN2Q5R3F8 820 aa13.74□□□□□ -0.21
CDC42BPB-203ENST00000558867 OR6S1Q8NH40 331 aa13.74□□□□□ -0.21
CDC42BPB-203ENST00000558867 RFKQ969G6 155 aa13.74□□□□□ -0.21
CDC42BPB-203ENST00000558867 SAMD8Q96LT4 415 aa13.74□□□□□ -0.21
CDC42BPB-203ENST00000558867 IL4I1Q96RQ9 567 aa13.74□□□□□ -0.21
CDC42BPB-203ENST00000558867 GPX7Q96SL4 187 aaPredicted RBP13.74□□□□□ -0.21
CDC42BPB-203ENST00000558867 MRPL37Q9BZE1 423 aaKnown RBP13.74□□□□□ -0.21
CDC42BPB-203ENST00000558867 FBXL3Q9UKT7 428 aa13.74□□□□□ -0.21
CDC42BPB-203ENST00000558867 A0A0G2JMP0 313 aa13.73□□□□□ -0.21
CDC42BPB-203ENST00000558867 A0A0X1KG70 313 aa13.73□□□□□ -0.21
CDC42BPB-203ENST00000558867 H3BSA7 217 aa13.73□□□□□ -0.21
CDC42BPB-203ENST00000558867 M0R129 80 aa13.73□□□□□ -0.21
CDC42BPB-203ENST00000558867 KCNAB3O43448 404 aa13.73□□□□□ -0.21
CDC42BPB-203ENST00000558867 OR2T1O43869 369 aa13.73□□□□□ -0.21
CDC42BPB-203ENST00000558867 OR7A10O76100 309 aa13.73□□□□□ -0.21
CDC42BPB-203ENST00000558867 NDUFB2O95178 105 aa13.73□□□□□ -0.21
CDC42BPB-203ENST00000558867 DBTP11182 482 aaKnown RBP13.73□□□□□ -0.21
CDC42BPB-203ENST00000558867 COL8A2P25067 703 aa13.73□□□□□ -0.21
CDC42BPB-203ENST00000558867 SLC6A6P31641 620 aa13.73□□□□□ -0.21
CDC42BPB-203ENST00000558867 ZNF91Q05481 1191 aa13.73□□□□□ -0.21
CDC42BPB-203ENST00000558867 ST3GAL4Q11206 333 aa13.73□□□□□ -0.21
CDC42BPB-203ENST00000558867 ARMC4Q5T2S8 1044 aa13.73□□□□□ -0.21
CDC42BPB-203ENST00000558867 AADACL4Q5VUY2 407 aa13.73□□□□□ -0.21
CDC42BPB-203ENST00000558867 NXNL2Q5VZ03 156 aa13.73□□□□□ -0.21
CDC42BPB-203ENST00000558867 OAFQ86UD1 273 aa13.73□□□□□ -0.21
CDC42BPB-203ENST00000558867 MYPOPQ86VE0 399 aaPredicted RBP13.73□□□□□ -0.21
CDC42BPB-203ENST00000558867 BPIFB2Q8N4F0 458 aa13.73□□□□□ -0.21
CDC42BPB-203ENST00000558867 OR4M2Q8NGB6 313 aa13.73□□□□□ -0.21
CDC42BPB-203ENST00000558867 RNF217Q8TC41 542 aa13.73□□□□□ -0.21
CDC42BPB-203ENST00000558867 RORBQ92753 470 aa13.73□□□□□ -0.21
CDC42BPB-203ENST00000558867 RAB39BQ96DA2 213 aa13.73□□□□□ -0.21
CDC42BPB-203ENST00000558867 LRR1Q96L50 414 aa13.73□□□□□ -0.21
CDC42BPB-203ENST00000558867 ZNF582Q96NG8 517 aaPredicted RBP13.73□□□□□ -0.21
CDC42BPB-203ENST00000558867 CCDC90BQ9GZT6 254 aa13.73□□□□□ -0.21
CDC42BPB-203ENST00000558867 RACGAP1Q9H0H5 632 aa13.73□□□□□ -0.21
CDC42BPB-203ENST00000558867 CMC2Q9NRP2 79 aa13.73□□□□□ -0.21
CDC42BPB-203ENST00000558867 PTTG2Q9NZH5 202 aa13.73□□□□□ -0.21
CDC42BPB-203ENST00000558867 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.73□□□□□ -0.21
CDC42BPB-203ENST00000558867 COMMD3-BMI1R4GMX3 469 aa13.73□□□□□ -0.21
CDC42BPB-203ENST00000558867 J3QLI3 93 aa13.72□□□□□ -0.21
CDC42BPB-203ENST00000558867 IDH3BO43837 385 aa13.72□□□□□ -0.21
CDC42BPB-203ENST00000558867 NPIPB7O75200 414 aa13.72□□□□□ -0.21
CDC42BPB-203ENST00000558867 HPXP02790 462 aa13.72□□□□□ -0.21
CDC42BPB-203ENST00000558867 FPR2P25090 351 aa13.72□□□□□ -0.21
CDC42BPB-203ENST00000558867 GP2P55259 537 aaKnown RBP13.72□□□□□ -0.21
CDC42BPB-203ENST00000558867 PIGFQ07326 219 aa13.72□□□□□ -0.21
CDC42BPB-203ENST00000558867 RAB40BQ12829 278 aa13.72□□□□□ -0.21
CDC42BPB-203ENST00000558867 FOXL1Q12952 345 aa13.72□□□□□ -0.21
CDC42BPB-203ENST00000558867 KLHL22Q53GT1 634 aa13.72□□□□□ -0.21
CDC42BPB-203ENST00000558867 PRR31Q5SQ13 230 aa13.72□□□□□ -0.21
CDC42BPB-203ENST00000558867 SHISA2Q6UWI4 295 aa13.72□□□□□ -0.21
CDC42BPB-203ENST00000558867 KDM8Q8N371 416 aa13.72□□□□□ -0.21
CDC42BPB-203ENST00000558867 STX19Q8N4C7 294 aa13.72□□□□□ -0.21
CDC42BPB-203ENST00000558867 OR13C2Q8NGS9 318 aa13.72□□□□□ -0.21
CDC42BPB-203ENST00000558867 NANPQ8TBE9 248 aa13.72□□□□□ -0.21
CDC42BPB-203ENST00000558867 PLEKHA8Q96JA3 519 aa13.72□□□□□ -0.21
CDC42BPB-203ENST00000558867 SYT3Q9BQG1 590 aa13.72□□□□□ -0.21
CDC42BPB-203ENST00000558867 FGF20Q9NP95 211 aaPredicted RBP13.72□□□□□ -0.21
CDC42BPB-203ENST00000558867 ZNF275Q9NSD4 429 aaPredicted RBP13.72□□□□□ -0.21
CDC42BPB-203ENST00000558867 DDX28Q9NUL7 540 aaKnown RBP13.72□□□□□ -0.21
CDC42BPB-203ENST00000558867 DNAJC27Q9NZQ0 273 aa13.72□□□□□ -0.21
CDC42BPB-203ENST00000558867 DUSP13Q9UII6 198 aa13.72□□□□□ -0.21
CDC42BPB-203ENST00000558867 HIF3AQ9Y2N7 669 aa13.72□□□□□ -0.21
CDC42BPB-203ENST00000558867 PKD1L1Q8TDX9 2849 aa13.72□□□□□ -0.21
CDC42BPB-203ENST00000558867 A0A1W2PPW3 197 aa13.71□□□□□ -0.21
CDC42BPB-203ENST00000558867 KPNA4O00629 521 aaPredicted RBP13.71□□□□□ -0.21
CDC42BPB-203ENST00000558867 ARPC3O15145 178 aa13.71□□□□□ -0.21
CDC42BPB-203ENST00000558867 FZD7O75084 574 aa13.71□□□□□ -0.21
CDC42BPB-203ENST00000558867 TRMUO75648 421 aaKnown RBP13.71□□□□□ -0.21
CDC42BPB-203ENST00000558867 RAB36O95755 333 aa13.71□□□□□ -0.21
CDC42BPB-203ENST00000558867 MT-ATP6P00846 226 aa13.71□□□□□ -0.21
CDC42BPB-203ENST00000558867 FUT1P19526 365 aa13.71□□□□□ -0.21
CDC42BPB-203ENST00000558867 ALDH3B1P43353 468 aa13.71□□□□□ -0.21
CDC42BPB-203ENST00000558867 RPS5P46782 204 aaKnown RBP13.71□□□□□ -0.21
CDC42BPB-203ENST00000558867 EGR4Q05215 589 aa13.71□□□□□ -0.21
CDC42BPB-203ENST00000558867 ZNF74Q16587 644 aa13.71□□□□□ -0.21
CDC42BPB-203ENST00000558867 AWAT1Q58HT5 328 aa13.71□□□□□ -0.21
CDC42BPB-203ENST00000558867 RBMS3Q6XE24 437 aaKnown RBP13.71□□□□□ -0.21
CDC42BPB-203ENST00000558867 ANKRD13BQ86YJ7 626 aa13.71□□□□□ -0.21
CDC42BPB-203ENST00000558867 CLVS1Q8IUQ0 354 aaPredicted RBP13.71□□□□□ -0.21
CDC42BPB-203ENST00000558867 GID4Q8IVV7 300 aa13.71□□□□□ -0.21
CDC42BPB-203ENST00000558867 RAB2BQ8WUD1 216 aa13.71□□□□□ -0.21
CDC42BPB-203ENST00000558867 ISOC1Q96CN7 298 aa13.71□□□□□ -0.21
CDC42BPB-203ENST00000558867 TMEM80Q96HE8 168 aa13.71□□□□□ -0.21
CDC42BPB-203ENST00000558867 JAM3Q9BX67 310 aa13.71□□□□□ -0.21
CDC42BPB-203ENST00000558867 NDEL1Q9GZM8 345 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms