RNA–Protein interactions for RNA: ENST00000539382.5

CTCFL-212, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-212ENST00000539382 TFECO14948 347 aaPredicted RBP9.78□□□□□ -0.84
CTCFL-212ENST00000539382 TMCC2O75069 709 aa9.78□□□□□ -0.84
CTCFL-212ENST00000539382 H2BFMP0C1H6 154 aa9.78□□□□□ -0.84
CTCFL-212ENST00000539382 SRMP19623 302 aa9.78□□□□□ -0.84
CTCFL-212ENST00000539382 MRPL28Q13084 256 aaKnown RBP9.78□□□□□ -0.84
CTCFL-212ENST00000539382 PDSS1Q5T2R2 415 aa9.78□□□□□ -0.84
CTCFL-212ENST00000539382 TSPO2Q5TGU0 170 aa9.78□□□□□ -0.84
CTCFL-212ENST00000539382 SPACA3Q8IXA5 215 aa9.78□□□□□ -0.84
CTCFL-212ENST00000539382 SNIP1Q8TAD8 396 aaKnown RBP9.78□□□□□ -0.84
CTCFL-212ENST00000539382 FBXO17Q96EF6 278 aa9.78□□□□□ -0.84
CTCFL-212ENST00000539382 NEDD4LQ96PU5 975 aa9.78□□□□□ -0.84
CTCFL-212ENST00000539382 CITED4Q96RK1 184 aa9.78□□□□□ -0.84
CTCFL-212ENST00000539382 NELFAQ9H3P2 528 aa9.78□□□□□ -0.84
CTCFL-212ENST00000539382 FAM206AQ9NX38 181 aa9.78□□□□□ -0.84
CTCFL-212ENST00000539382 COMMD3Q9UBI1 195 aa9.78□□□□□ -0.84
CTCFL-212ENST00000539382 AK6Q9Y3D8 172 aaKnown RBP9.78□□□□□ -0.84
CTCFL-212ENST00000539382 R4GMQ9 66 aa9.78□□□□□ -0.84
CTCFL-212ENST00000539382 TRAV8-7A0A075B6U6 113 aa9.77□□□□□ -0.84
CTCFL-212ENST00000539382 A0A0B4J203 849 aa9.77□□□□□ -0.84
CTCFL-212ENST00000539382 TMEM269A0A1B0GVZ9 245 aa9.77□□□□□ -0.84
CTCFL-212ENST00000539382 C5orf63A6NC05 138 aa9.77□□□□□ -0.84
CTCFL-212ENST00000539382 FABP12A6NFH5 140 aa9.77□□□□□ -0.84
CTCFL-212ENST00000539382 HSPB2A8KAH6 182 aa9.77□□□□□ -0.84
CTCFL-212ENST00000539382 SLC43A1O75387 559 aa9.77□□□□□ -0.84
CTCFL-212ENST00000539382 ZNF254O75437 659 aa9.77□□□□□ -0.84
CTCFL-212ENST00000539382 PAHP00439 452 aa9.77□□□□□ -0.84
CTCFL-212ENST00000539382 CPN1P15169 458 aa9.77□□□□□ -0.84
CTCFL-212ENST00000539382 MSR1P21757 451 aa9.77□□□□□ -0.84
CTCFL-212ENST00000539382 MYL9P24844 172 aa9.77□□□□□ -0.84
CTCFL-212ENST00000539382 RFX2P48378 723 aa9.77□□□□□ -0.84
CTCFL-212ENST00000539382 CCR9P51686 369 aa9.77□□□□□ -0.84
CTCFL-212ENST00000539382 FOXG1P55316 489 aaPredicted RBP9.77□□□□□ -0.84
CTCFL-212ENST00000539382 HSPB2Q16082 182 aa9.77□□□□□ -0.84
CTCFL-212ENST00000539382 RSPO1Q2MKA7 263 aaPredicted RBP9.77□□□□□ -0.84
CTCFL-212ENST00000539382 Q499Y3 187 aa9.77□□□□□ -0.84
CTCFL-212ENST00000539382 HSD17B12Q53GQ0 312 aa9.77□□□□□ -0.84
CTCFL-212ENST00000539382 IDNKQ5T6J7 187 aa9.77□□□□□ -0.84
CTCFL-212ENST00000539382 SFXN4Q6P4A7 337 aa9.77□□□□□ -0.84
CTCFL-212ENST00000539382 DEGS2Q6QHC5 323 aa9.77□□□□□ -0.84
CTCFL-212ENST00000539382 IGFL3Q6UXB1 125 aa9.77□□□□□ -0.84
CTCFL-212ENST00000539382 INTS12Q96CB8 462 aaKnown RBP9.77□□□□□ -0.84
CTCFL-212ENST00000539382 CALHM2Q9HA72 323 aa9.77□□□□□ -0.84
CTCFL-212ENST00000539382 E9PLN8 166 aa9.77□□□□□ -0.85
CTCFL-212ENST00000539382 GPR171O14626 319 aa9.77□□□□□ -0.85
CTCFL-212ENST00000539382 LMX1BO60663 402 aa9.77□□□□□ -0.85
CTCFL-212ENST00000539382 HPGDSO60760 199 aa9.77□□□□□ -0.85
CTCFL-212ENST00000539382 IGHG3P01860 377 aa9.77□□□□□ -0.85
CTCFL-212ENST00000539382 SLC2A1P11166 492 aa9.77□□□□□ -0.85
CTCFL-212ENST00000539382 ADRA2CP18825 462 aa9.77□□□□□ -0.85
CTCFL-212ENST00000539382 LSM6P62312 80 aaKnown RBP9.77□□□□□ -0.85
CTCFL-212ENST00000539382 XKRXQ6PP77 449 aa9.77□□□□□ -0.85
CTCFL-212ENST00000539382 NAA40Q86UY6 237 aa9.77□□□□□ -0.85
CTCFL-212ENST00000539382 OR2AJ1Q8NGZ0 328 aa9.77□□□□□ -0.85
CTCFL-212ENST00000539382 FGFBP3Q8TAT2 258 aa9.77□□□□□ -0.85
CTCFL-212ENST00000539382 HAVCR2Q8TDQ0 301 aa9.77□□□□□ -0.85
CTCFL-212ENST00000539382 TMEM106AQ96A25 262 aa9.77□□□□□ -0.85
CTCFL-212ENST00000539382 COMMD4Q9H0A8 199 aa9.77□□□□□ -0.85
CTCFL-212ENST00000539382 SLC7A10Q9NS82 523 aa9.77□□□□□ -0.85
CTCFL-212ENST00000539382 DDX28Q9NUL7 540 aaKnown RBP9.77□□□□□ -0.85
CTCFL-212ENST00000539382 ZNF319Q9P2F9 582 aa9.77□□□□□ -0.85
CTCFL-212ENST00000539382 OR52A1Q9UKL2 312 aa9.77□□□□□ -0.85
CTCFL-212ENST00000539382 CAMK2AQ9UQM7 478 aa9.77□□□□□ -0.85
CTCFL-212ENST00000539382 SLC5A6Q9Y289 635 aa9.77□□□□□ -0.85
CTCFL-212ENST00000539382 NOSIPQ9Y314 301 aaKnown RBP9.77□□□□□ -0.85
CTCFL-212ENST00000539382 MSRB2Q9Y3D2 182 aa9.77□□□□□ -0.85
CTCFL-212ENST00000539382 ZZEF1O43149 2961 aa9.76□□□□□ -0.85
CTCFL-212ENST00000539382 TRBV5-7A0A0A0MS05 114 aa9.76□□□□□ -0.85
CTCFL-212ENST00000539382 TPD52L2O43399 206 aaKnown RBP9.76□□□□□ -0.85
CTCFL-212ENST00000539382 ARL6IP5O75915 188 aa9.76□□□□□ -0.85
CTCFL-212ENST00000539382 SYNGR4O95473 234 aa9.76□□□□□ -0.85
CTCFL-212ENST00000539382 CSF3P09919 207 aa9.76□□□□□ -0.85
CTCFL-212ENST00000539382 PATE4P0C8F1 98 aa9.76□□□□□ -0.85
CTCFL-212ENST00000539382 B4GALT1P15291 398 aa9.76□□□□□ -0.85
CTCFL-212ENST00000539382 ATF1P18846 271 aa9.76□□□□□ -0.85
CTCFL-212ENST00000539382 RAB3BP20337 219 aa9.76□□□□□ -0.85
CTCFL-212ENST00000539382 MMP16P51512 607 aa9.76□□□□□ -0.85
CTCFL-212ENST00000539382 PRKXP51817 358 aa9.76□□□□□ -0.85
CTCFL-212ENST00000539382 PPP3R1P63098 170 aa9.76□□□□□ -0.85
CTCFL-212ENST00000539382 SCN1BQ07699 218 aa9.76□□□□□ -0.85
CTCFL-212ENST00000539382 CEACAM16Q2WEN9 425 aa9.76□□□□□ -0.85
CTCFL-212ENST00000539382 PYDC2Q56P42 97 aa9.76□□□□□ -0.85
CTCFL-212ENST00000539382 AGAP6Q5VW22 663 aa9.76□□□□□ -0.85
CTCFL-212ENST00000539382 NUFIP2Q7Z417 695 aaKnown RBP9.76□□□□□ -0.85
CTCFL-212ENST00000539382 TPRA1Q86W33 373 aa9.76□□□□□ -0.85
CTCFL-212ENST00000539382 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.76□□□□□ -0.85
CTCFL-212ENST00000539382 GPR148Q8TDV2 347 aa9.76□□□□□ -0.85
CTCFL-212ENST00000539382 SLC7A6Q92536 515 aa9.76□□□□□ -0.85
CTCFL-212ENST00000539382 PNPLA2Q96AD5 504 aa9.76□□□□□ -0.85
CTCFL-212ENST00000539382 TMEM45BQ96B21 275 aa9.76□□□□□ -0.85
CTCFL-212ENST00000539382 BCO1Q9HAY6 547 aa9.76□□□□□ -0.85
CTCFL-212ENST00000539382 GPR35Q9HC97 309 aa9.76□□□□□ -0.85
CTCFL-212ENST00000539382 MCTS1Q9ULC4 181 aaKnown RBP9.76□□□□□ -0.85
CTCFL-212ENST00000539382 ZNF878C9JN71 531 aa9.76□□□□□ -0.85
CTCFL-212ENST00000539382 MRPL33O75394 65 aaKnown RBP9.76□□□□□ -0.85
CTCFL-212ENST00000539382 TTRP02766 147 aa9.76□□□□□ -0.85
CTCFL-212ENST00000539382 EPXP11678 715 aa9.76□□□□□ -0.85
CTCFL-212ENST00000539382 NR2C1P13056 603 aa9.76□□□□□ -0.85
CTCFL-212ENST00000539382 HIST1H3AP68431 136 aa9.76□□□□□ -0.85
CTCFL-212ENST00000539382 MRPS34P82930 218 aaKnown RBP9.76□□□□□ -0.85
CTCFL-212ENST00000539382 ZNF169Q14929 603 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms