RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 ZNF486Q96H40 463 aaPredicted RBP15.17■□□□□ 0.02
MRPL28-210ENST00000483764 INTS14Q96SY0 518 aa15.17■□□□□ 0.02
MRPL28-210ENST00000483764 COMMD4Q9H0A8 199 aa15.17■□□□□ 0.02
MRPL28-210ENST00000483764 ACOXLQ9NUZ1 547 aa15.17■□□□□ 0.02
MRPL28-210ENST00000483764 EMC3Q9P0I2 261 aa15.17■□□□□ 0.02
MRPL28-210ENST00000483764 LAMP5Q9UJQ1 280 aa15.17■□□□□ 0.02
MRPL28-210ENST00000483764 RCE1Q9Y256 329 aa15.17■□□□□ 0.02
MRPL28-210ENST00000483764 FAM172BPA6NC97 362 aa15.17■□□□□ 0.02
MRPL28-210ENST00000483764 ERVH48-1M5A8F1 160 aa15.17■□□□□ 0.02
MRPL28-210ENST00000483764 AIPO00170 330 aa15.17■□□□□ 0.02
MRPL28-210ENST00000483764 SSX4O60224 188 aa15.17■□□□□ 0.02
MRPL28-210ENST00000483764 ATP6V1G1O75348 118 aa15.17■□□□□ 0.02
MRPL28-210ENST00000483764 FCGR2AP12318 317 aa15.17■□□□□ 0.02
MRPL28-210ENST00000483764 CTLA4P16410 223 aa15.17■□□□□ 0.02
MRPL28-210ENST00000483764 SRMP19623 302 aa15.17■□□□□ 0.02
MRPL28-210ENST00000483764 NTF4P34130 210 aa15.17■□□□□ 0.02
MRPL28-210ENST00000483764 SELENOPP49908 381 aa15.17■□□□□ 0.02
MRPL28-210ENST00000483764 CCR9P51686 369 aa15.17■□□□□ 0.02
MRPL28-210ENST00000483764 TDGF1P3P51864 188 aa15.17■□□□□ 0.02
MRPL28-210ENST00000483764 RIPPLY1Q0D2K3 151 aa15.17■□□□□ 0.02
MRPL28-210ENST00000483764 HIST3H3Q16695 136 aa15.17■□□□□ 0.02
MRPL28-210ENST00000483764 Q499Y3 187 aa15.17■□□□□ 0.02
MRPL28-210ENST00000483764 ATAD3CQ5T2N8 411 aa15.17■□□□□ 0.02
MRPL28-210ENST00000483764 DNM1P34Q6PK57 102 aa15.17■□□□□ 0.02
MRPL28-210ENST00000483764 RPTNQ6XPR3 784 aa15.17■□□□□ 0.02
MRPL28-210ENST00000483764 AAED1Q7RTV5 226 aa15.17■□□□□ 0.02
MRPL28-210ENST00000483764 TCTE3Q8IZS6 198 aa15.17■□□□□ 0.02
MRPL28-210ENST00000483764 TMEM123Q8N131 208 aa15.17■□□□□ 0.02
MRPL28-210ENST00000483764 RAB40AQ8WXH6 277 aa15.17■□□□□ 0.02
MRPL28-210ENST00000483764 TRIB1Q96RU8 372 aa15.17■□□□□ 0.02
MRPL28-210ENST00000483764 SLX1AQ9BQ83 275 aa15.17■□□□□ 0.02
MRPL28-210ENST00000483764 PPIL3Q9H2H8 161 aaKnown RBP15.17■□□□□ 0.02
MRPL28-210ENST00000483764 RNF122Q9H9V4 155 aa15.17■□□□□ 0.02
MRPL28-210ENST00000483764 BCO1Q9HAY6 547 aa15.17■□□□□ 0.02
MRPL28-210ENST00000483764 B3GAT2Q9NPZ5 323 aa15.17■□□□□ 0.02
MRPL28-210ENST00000483764 CLCF1Q9UBD9 225 aa15.17■□□□□ 0.02
MRPL28-210ENST00000483764 COPS3Q9UNS2 423 aa15.17■□□□□ 0.02
MRPL28-210ENST00000483764 IGLV1-36A0A0B4J1U3 117 aa15.16■□□□□ 0.02
MRPL28-210ENST00000483764 A0A0G2JMP0 313 aa15.16■□□□□ 0.02
MRPL28-210ENST00000483764 A0A0X1KG70 313 aa15.16■□□□□ 0.02
MRPL28-210ENST00000483764 ZNF724A8MTY0 619 aa15.16■□□□□ 0.02
MRPL28-210ENST00000483764 RGS13O14921 159 aa15.16■□□□□ 0.02
MRPL28-210ENST00000483764 EIF4EP06730 217 aaKnown RBP15.16■□□□□ 0.02
MRPL28-210ENST00000483764 YES1P07947 543 aa15.16■□□□□ 0.02
MRPL28-210ENST00000483764 PSKH1P11801 424 aa15.16■□□□□ 0.02
MRPL28-210ENST00000483764 CFPP27918 469 aa15.16■□□□□ 0.02
MRPL28-210ENST00000483764 SLC6A1P30531 599 aa15.16■□□□□ 0.02
MRPL28-210ENST00000483764 MNDAP41218 407 aa15.16■□□□□ 0.02
MRPL28-210ENST00000483764 AP3S2P59780 193 aa15.16■□□□□ 0.02
MRPL28-210ENST00000483764 FMODQ06828 376 aa15.16■□□□□ 0.02
MRPL28-210ENST00000483764 DYRK1AQ13627 763 aa15.16■□□□□ 0.02
MRPL28-210ENST00000483764 SF3B4Q15427 424 aaKnown RBP eCLIP15.16■□□□□ 0.029e-6■■■■■ 27.7
MRPL28-210ENST00000483764 ETFDHQ16134 617 aa15.16■□□□□ 0.02
MRPL28-210ENST00000483764 CEP78Q5JTW2 689 aa15.16■□□□□ 0.02
MRPL28-210ENST00000483764 ZNF585AQ6P3V2 769 aa15.16■□□□□ 0.02
MRPL28-210ENST00000483764 P4HA3Q7Z4N8 544 aa15.16■□□□□ 0.02
MRPL28-210ENST00000483764 LIX1LQ8IVB5 337 aa15.16■□□□□ 0.02
MRPL28-210ENST00000483764 TUSC5Q8IXB3 177 aa15.16■□□□□ 0.02
MRPL28-210ENST00000483764 OR4M2Q8NGB6 313 aa15.16■□□□□ 0.02
MRPL28-210ENST00000483764 OR6N1Q8NGY5 312 aa15.16■□□□□ 0.02
MRPL28-210ENST00000483764 OR5AK2Q8NH90 309 aa15.16■□□□□ 0.02
MRPL28-210ENST00000483764 TRIM63Q969Q1 353 aa15.16■□□□□ 0.02
MRPL28-210ENST00000483764 TMEM45BQ96B21 275 aa15.16■□□□□ 0.02
MRPL28-210ENST00000483764 INTS12Q96CB8 462 aaKnown RBP15.16■□□□□ 0.02
MRPL28-210ENST00000483764 DERL3Q96Q80 235 aa15.16■□□□□ 0.02
MRPL28-210ENST00000483764 ACTR6Q9GZN1 396 aa15.16■□□□□ 0.02
MRPL28-210ENST00000483764 ASF1BQ9NVP2 202 aa15.16■□□□□ 0.02
MRPL28-210ENST00000483764 GLTPQ9NZD2 209 aa15.16■□□□□ 0.02
MRPL28-210ENST00000483764 ACACBO00763 2458 aa15.16■□□□□ 0.02
MRPL28-210ENST00000483764 TRBV5-5A0A0J9YX44 114 aa15.15■□□□□ 0.02
MRPL28-210ENST00000483764 TTLL8A6PVC2 850 aa15.15■□□□□ 0.02
MRPL28-210ENST00000483764 KHDRBS3O75525 346 aaKnown RBP15.15■□□□□ 0.02
MRPL28-210ENST00000483764 ECDO95905 644 aaPredicted RBP15.15■□□□□ 0.02
MRPL28-210ENST00000483764 DHFRP00374 187 aa15.15■□□□□ 0.02
MRPL28-210ENST00000483764 NR2C1P13056 603 aa15.15■□□□□ 0.02
MRPL28-210ENST00000483764 ALOX5APP20292 161 aa15.15■□□□□ 0.02
MRPL28-210ENST00000483764 CSNK1A1P48729 337 aa15.15■□□□□ 0.02
MRPL28-210ENST00000483764 LY6DQ14210 128 aa15.15■□□□□ 0.02
MRPL28-210ENST00000483764 TBRG1Q3YBR2 411 aa15.15■□□□□ 0.02
MRPL28-210ENST00000483764 PRR30Q53SZ7 412 aaPredicted RBP15.15■□□□□ 0.02
MRPL28-210ENST00000483764 YIPF7Q8N8F6 280 aa15.15■□□□□ 0.02
MRPL28-210ENST00000483764 ZNF511Q8NB15 262 aa15.15■□□□□ 0.02
MRPL28-210ENST00000483764 ZNF671Q8TAW3 534 aa15.15■□□□□ 0.02
MRPL28-210ENST00000483764 TMEM54Q969K7 222 aa15.15■□□□□ 0.02
MRPL28-210ENST00000483764 MCHR2Q969V1 340 aa15.15■□□□□ 0.02
MRPL28-210ENST00000483764 ST6GAL2Q96JF0 529 aa15.15■□□□□ 0.02
MRPL28-210ENST00000483764 MMP28Q9H239 520 aa15.15■□□□□ 0.02
MRPL28-210ENST00000483764 GP6Q9HCN6 339 aa15.15■□□□□ 0.02
MRPL28-210ENST00000483764 PARPBPQ9NWS1 579 aa15.15■□□□□ 0.02
MRPL28-210ENST00000483764 ING3Q9NXR8 418 aa15.15■□□□□ 0.02
MRPL28-210ENST00000483764 MALT1Q9UDY8 824 aa15.15■□□□□ 0.02
MRPL28-210ENST00000483764 CLEC4AQ9UMR7 237 aa15.15■□□□□ 0.02
MRPL28-210ENST00000483764 NOSIPQ9Y314 301 aaKnown RBP15.15■□□□□ 0.02
MRPL28-210ENST00000483764 CACNG2Q9Y698 323 aa15.15■□□□□ 0.02
MRPL28-210ENST00000483764 ALPK2Q86TB3 2170 aa15.15■□□□□ 0.02
MRPL28-210ENST00000483764 TLN1Q9Y490 2541 aaKnown RBP15.14■□□□□ 0.01
MRPL28-210ENST00000483764 IGKV1D-43A0A0B4J1Z2 117 aa15.14■□□□□ 0.01
MRPL28-210ENST00000483764 LINC00854A0A1B0GVQ3 168 aa15.14■□□□□ 0.01
MRPL28-210ENST00000483764 NAP1L6A6NFF2 107 aa15.14■□□□□ 0.01
MRPL28-210ENST00000483764 IFITM5A6NNB3 132 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms