RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 GZMHP20718 246 aa0.11□□□□□ -2.39
NCKAP1-204ENST00000477988 RGS4P49798 205 aa0.11□□□□□ -2.39
NCKAP1-204ENST00000477988 DUSP3P51452 185 aaPredicted RBP0.11□□□□□ -2.39
NCKAP1-204ENST00000477988 VSX2P58304 361 aaPredicted RBP0.11□□□□□ -2.39
NCKAP1-204ENST00000477988 ILKQ13418 452 aa0.11□□□□□ -2.39
NCKAP1-204ENST00000477988 CCDC92Q53HC0 331 aaPredicted RBP0.11□□□□□ -2.39
NCKAP1-204ENST00000477988 SOHLH1Q5JUK2 328 aa0.11□□□□□ -2.39
NCKAP1-204ENST00000477988 KCTD16Q68DU8 428 aa0.11□□□□□ -2.39
NCKAP1-204ENST00000477988 DEFB119Q8N690 84 aa0.11□□□□□ -2.39
NCKAP1-204ENST00000477988 MGARPQ8TDB4 240 aa0.11□□□□□ -2.39
NCKAP1-204ENST00000477988 ZNF625Q96I27 306 aaPredicted RBP0.11□□□□□ -2.39
NCKAP1-204ENST00000477988 SLC7A8Q9UHI5 535 aa0.11□□□□□ -2.39
NCKAP1-204ENST00000477988 RWDD2AQ9UIY3 292 aa0.11□□□□□ -2.39
NCKAP1-204ENST00000477988 CSDC2Q9Y534 153 aaKnown RBP0.11□□□□□ -2.39
NCKAP1-204ENST00000477988 CCDC88CQ9P219 2028 aa0.11□□□□□ -2.39
NCKAP1-204ENST00000477988 PALLDQ8WX93 1383 aa0.1□□□□□ -2.39
NCKAP1-204ENST00000477988 GPR98Q8WXG9 6306 aa0.1□□□□□ -2.39
NCKAP1-204ENST00000477988 SMIM26A0A096LP01 95 aa0.1□□□□□ -2.39
NCKAP1-204ENST00000477988 A0A1W2PNM2 257 aa0.1□□□□□ -2.39
NCKAP1-204ENST00000477988 MAPK13O15264 365 aa0.1□□□□□ -2.39
NCKAP1-204ENST00000477988 CTRB1P17538 263 aa0.1□□□□□ -2.39
NCKAP1-204ENST00000477988 ATP6V1C1P21283 382 aa0.1□□□□□ -2.39
NCKAP1-204ENST00000477988 F2RP25116 425 aa0.1□□□□□ -2.39
NCKAP1-204ENST00000477988 FBXW4P57775 412 aa0.1□□□□□ -2.39
NCKAP1-204ENST00000477988 SIGLEC14Q08ET2 396 aa0.1□□□□□ -2.39
NCKAP1-204ENST00000477988 TATDN3Q17R31 274 aa0.1□□□□□ -2.39
NCKAP1-204ENST00000477988 PDZK1Q5T2W1 519 aa0.1□□□□□ -2.39
NCKAP1-204ENST00000477988 EID2Q8N6I1 236 aa0.1□□□□□ -2.39
NCKAP1-204ENST00000477988 FADS6Q8N9I5 356 aa0.1□□□□□ -2.39
NCKAP1-204ENST00000477988 MSANTD4Q8NCY6 345 aa0.1□□□□□ -2.39
NCKAP1-204ENST00000477988 OR4M1Q8NGD0 313 aa0.1□□□□□ -2.39
NCKAP1-204ENST00000477988 SLC2A14Q8TDB8 520 aa0.1□□□□□ -2.39
NCKAP1-204ENST00000477988 SEH1LQ96EE3 360 aa0.1□□□□□ -2.39
NCKAP1-204ENST00000477988 GALNT14Q96FL9 552 aa0.1□□□□□ -2.39
NCKAP1-204ENST00000477988 FMO2Q99518 471 aa0.1□□□□□ -2.39
NCKAP1-204ENST00000477988 SH3GL1Q99961 368 aa0.1□□□□□ -2.39
NCKAP1-204ENST00000477988 SPXQ9BT56 116 aa0.1□□□□□ -2.39
NCKAP1-204ENST00000477988 NUDT9Q9BW91 350 aa0.1□□□□□ -2.39
NCKAP1-204ENST00000477988 MYOZ1Q9NP98 299 aaPredicted RBP0.1□□□□□ -2.39
NCKAP1-204ENST00000477988 MOSPD1Q9UJG1 213 aa0.1□□□□□ -2.39
NCKAP1-204ENST00000477988 FARSAQ9Y285 508 aaKnown RBP0.1□□□□□ -2.39
NCKAP1-204ENST00000477988 CNTNAP1P78357 1384 aa0.09□□□□□ -2.39
NCKAP1-204ENST00000477988 RNF103-CHMP3A0A140T963 221 aa0.09□□□□□ -2.4
NCKAP1-204ENST00000477988 SERPINB7O75635 380 aa0.09□□□□□ -2.4
NCKAP1-204ENST00000477988 SEMA3DO95025 777 aa0.09□□□□□ -2.4
NCKAP1-204ENST00000477988 IGKV1-39P01597 117 aa0.09□□□□□ -2.4
NCKAP1-204ENST00000477988 IGKV1D-39P04432 117 aa0.09□□□□□ -2.4
NCKAP1-204ENST00000477988 CGB7P0DN87 165 aa0.09□□□□□ -2.4
NCKAP1-204ENST00000477988 ARF4P18085 180 aaPredicted RBP0.09□□□□□ -2.4
NCKAP1-204ENST00000477988 PRPS1L1P21108 318 aa0.09□□□□□ -2.4
NCKAP1-204ENST00000477988 CCND2P30279 289 aa0.09□□□□□ -2.4
NCKAP1-204ENST00000477988 YAP1P46937 504 aaKnown RBP0.09□□□□□ -2.4
NCKAP1-204ENST00000477988 ZNF140P52738 457 aaPredicted RBP0.09□□□□□ -2.4
NCKAP1-204ENST00000477988 SYNJ2BPP57105 145 aa0.09□□□□□ -2.4
NCKAP1-204ENST00000477988 TAS2R43P59537 309 aa0.09□□□□□ -2.4
NCKAP1-204ENST00000477988 MRPL28Q13084 256 aaKnown RBP0.09□□□□□ -2.4
NCKAP1-204ENST00000477988 PRDX4Q13162 271 aa0.09□□□□□ -2.4
NCKAP1-204ENST00000477988 BTN1A1Q13410 526 aa0.09□□□□□ -2.4
NCKAP1-204ENST00000477988 SLC25A35Q3KQZ1 300 aa0.09□□□□□ -2.4
NCKAP1-204ENST00000477988 LDLRAD2Q5SZI1 272 aa0.09□□□□□ -2.4
NCKAP1-204ENST00000477988 OR4F3Q6IEY1 312 aa0.09□□□□□ -2.4
NCKAP1-204ENST00000477988 PAGE2Q7Z2X7 111 aa0.09□□□□□ -2.4
NCKAP1-204ENST00000477988 GPR26Q8NDV2 337 aa0.09□□□□□ -2.4
NCKAP1-204ENST00000477988 CXorf40AQ8TE69 158 aa0.09□□□□□ -2.4
NCKAP1-204ENST00000477988 GHSRQ92847 366 aa0.09□□□□□ -2.4
NCKAP1-204ENST00000477988 RBPMSQ93062 196 aaKnown RBP0.09□□□□□ -2.4
NCKAP1-204ENST00000477988 RBM14Q96PK6 669 aaKnown RBP0.09□□□□□ -2.4
NCKAP1-204ENST00000477988 KCNK16Q96T55 309 aa0.09□□□□□ -2.4
NCKAP1-204ENST00000477988 RETNQ9HD89 108 aa0.09□□□□□ -2.4
NCKAP1-204ENST00000477988 PIPOXQ9P0Z9 390 aa0.09□□□□□ -2.4
NCKAP1-204ENST00000477988 N6AMT1Q9Y5N5 214 aa0.09□□□□□ -2.4
NCKAP1-204ENST00000477988 SSH2Q76I76 1423 aa0.09□□□□□ -2.4
NCKAP1-204ENST00000477988 KMT2EQ8IZD2 1858 aa0.09□□□□□ -2.4
NCKAP1-204ENST00000477988 MPDZO75970 2070 aa0.09□□□□□ -2.4
NCKAP1-204ENST00000477988 BRD4O60885 1362 aaPredicted RBP0.08□□□□□ -2.4
NCKAP1-204ENST00000477988 CLRN2A0PK11 232 aa0.08□□□□□ -2.4
NCKAP1-204ENST00000477988 CHMP2AO43633 222 aa0.08□□□□□ -2.4
NCKAP1-204ENST00000477988 EIF4E2O60573 245 aaKnown RBP0.08□□□□□ -2.4
NCKAP1-204ENST00000477988 AK1P00568 194 aa0.08□□□□□ -2.4
NCKAP1-204ENST00000477988 IGHG2P01859 326 aa0.08□□□□□ -2.4
NCKAP1-204ENST00000477988 EPB41P11171 864 aaKnown RBP0.08□□□□□ -2.4
NCKAP1-204ENST00000477988 KRTAP21-1Q3LI58 79 aa0.08□□□□□ -2.4
NCKAP1-204ENST00000477988 ANKFN1Q8N957 763 aa0.08□□□□□ -2.4
NCKAP1-204ENST00000477988 MRPL43Q8N983 215 aaKnown RBP0.08□□□□□ -2.4
NCKAP1-204ENST00000477988 OR5P3Q8WZ94 311 aa0.08□□□□□ -2.4
NCKAP1-204ENST00000477988 MTMR9Q96QG7 549 aa0.08□□□□□ -2.4
NCKAP1-204ENST00000477988 VSIRQ9H7M9 311 aa0.08□□□□□ -2.4
NCKAP1-204ENST00000477988 NMRAL1Q9HBL8 299 aa0.08□□□□□ -2.4
NCKAP1-204ENST00000477988 VANGL2Q9ULK5 521 aa0.08□□□□□ -2.4
NCKAP1-204ENST00000477988 ING4Q9UNL4 249 aa0.08□□□□□ -2.4
NCKAP1-204ENST00000477988 ABCC9O60706 1549 aa0.08□□□□□ -2.4
NCKAP1-204ENST00000477988 SURF6O75683 361 aaKnown RBP0.07□□□□□ -2.4
NCKAP1-204ENST00000477988 MFN2O95140 757 aa0.07□□□□□ -2.4
NCKAP1-204ENST00000477988 CLIC3O95833 236 aa0.07□□□□□ -2.4
NCKAP1-204ENST00000477988 NRASP01111 189 aa0.07□□□□□ -2.4
NCKAP1-204ENST00000477988 HRASP01112 189 aa0.07□□□□□ -2.4
NCKAP1-204ENST00000477988 KRASP01116 189 aa0.07□□□□□ -2.4
NCKAP1-204ENST00000477988 GGT1P19440 569 aa0.07□□□□□ -2.4
NCKAP1-204ENST00000477988 PRKACBP22694 351 aa0.07□□□□□ -2.4
NCKAP1-204ENST00000477988 TALDO1P37837 337 aa0.07□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms