RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 DCAF12L2Q5VW00 463 aa9.33□□□□□ -0.92
CLSTN1-203ENST00000435891 NUP54Q7Z3B4 507 aa9.33□□□□□ -0.92
CLSTN1-203ENST00000435891 LINC00346Q8IVM7 164 aa9.33□□□□□ -0.92
CLSTN1-203ENST00000435891 SCARB1Q8WTV0 552 aa9.33□□□□□ -0.92
CLSTN1-203ENST00000435891 ZNF251Q9BRH9 671 aa9.33□□□□□ -0.92
CLSTN1-203ENST00000435891 TXNIPQ9H3M7 391 aa9.33□□□□□ -0.92
CLSTN1-203ENST00000435891 ARID1AO14497 2285 aa9.33□□□□□ -0.92
CLSTN1-203ENST00000435891 SHISA8B8ZZ34 492 aa9.33□□□□□ -0.92
CLSTN1-203ENST00000435891 WRBO00258 174 aa9.33□□□□□ -0.92
CLSTN1-203ENST00000435891 ACAA1P09110 424 aaPredicted RBP9.33□□□□□ -0.92
CLSTN1-203ENST00000435891 GTF2F2P13984 249 aa9.33□□□□□ -0.92
CLSTN1-203ENST00000435891 CPN1P15169 458 aa9.33□□□□□ -0.92
CLSTN1-203ENST00000435891 S100PP25815 95 aa9.33□□□□□ -0.92
CLSTN1-203ENST00000435891 GK2Q14410 553 aaPredicted RBP9.33□□□□□ -0.92
CLSTN1-203ENST00000435891 TMEM225Q6GV28 225 aa9.33□□□□□ -0.92
CLSTN1-203ENST00000435891 FAM166AQ6J272 317 aa9.33□□□□□ -0.92
CLSTN1-203ENST00000435891 OGFOD3Q6PK18 319 aa9.33□□□□□ -0.92
CLSTN1-203ENST00000435891 KRT77Q7Z794 578 aa9.33□□□□□ -0.92
CLSTN1-203ENST00000435891 SPICQ8N5J4 248 aa9.33□□□□□ -0.92
CLSTN1-203ENST00000435891 SLC25A28Q96A46 364 aa9.33□□□□□ -0.92
CLSTN1-203ENST00000435891 SLC2A4RGQ9NR83 387 aa9.33□□□□□ -0.92
CLSTN1-203ENST00000435891 GPN3Q9UHW5 284 aaPredicted RBP9.33□□□□□ -0.92
CLSTN1-203ENST00000435891 DCDC2BA2VCK2 349 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 SOX1O00570 391 aaPredicted RBP9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 SLC17A2O00624 439 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 ZNF432O94892 652 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 OR2A4O95047 310 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 MECP2P51608 486 aaKnown RBP9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 POLR2HP52434 150 aaKnown RBP9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 GLYATL3Q5SZD4 288 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 SLC18B1Q6NT16 456 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 FDX2Q6P4F2 183 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 TMEM17Q86X19 198 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 MUC20Q8N307 709 aaPredicted RBP9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 ZNF441Q8N8Z8 693 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 RBM14Q96PK6 669 aaKnown RBP9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 OR2A7Q96R45 310 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 MNTQ99583 582 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 SPSB2Q99619 263 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 PAPOLGQ9BWT3 736 aaKnown RBP9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 ATG5Q9H1Y0 275 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 VSX1Q9NZR4 365 aaPredicted RBP9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 EMC9Q9Y3B6 208 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 MTCH2Q9Y6C9 303 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 RTTNQ86VV8 2226 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 WDFY4Q6ZS81 3184 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 A0A1W2PQD3 144 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 A8MXK9 166 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 SMAD9O15198 467 aaKnown RBP9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 EIF4E2O60573 245 aaKnown RBP9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 TMEM127O75204 238 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 IKZF1Q13422 519 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 RAB11BQ15907 218 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 MOGAT2Q3SYC2 334 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 AVPI1Q5T686 147 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 SLC29A4Q7RTT9 530 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 WDSUB1Q8N9V3 476 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 DAZLQ92904 295 aaKnown RBP9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 CHRNA10Q9GZZ6 450 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 TMEM138Q9NPI0 162 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 A8MVM7 634 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 FTCDNL1E5RQL4 147 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 MT-ATP6P00846 226 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 GIPP09681 153 aaPredicted RBP9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 FBXW4P57775 412 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 RAB5BP61020 215 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 ROM1Q03395 351 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 SPOCK1Q08629 439 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 B3GNTL1Q67FW5 361 aaPredicted RBP9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 CATSPERDQ86XM0 798 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 CLEC1AQ8NC01 280 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 BPIFCQ8NFQ6 507 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 OIT3Q8WWZ8 545 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 FOXQ1Q9C009 403 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 ZNF576Q9H609 170 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 MED29Q9NX70 200 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 COPS7AQ9UBW8 275 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 DHDHQ9UQ10 334 aa9.32□□□□□ -0.92
CLSTN1-203ENST00000435891 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.31□□□□□ -0.92
CLSTN1-203ENST00000435891 LOC100289279A0A1B0GTE1 492 aa9.31□□□□□ -0.92
CLSTN1-203ENST00000435891 A0A1B0GV90 55 aa9.31□□□□□ -0.92
CLSTN1-203ENST00000435891 A0A1W2PPC1 479 aa9.31□□□□□ -0.92
CLSTN1-203ENST00000435891 ZNF217O75362 1048 aa9.31□□□□□ -0.92
CLSTN1-203ENST00000435891 IL5P05113 134 aa9.31□□□□□ -0.92
CLSTN1-203ENST00000435891 S100A11P31949 105 aa9.31□□□□□ -0.92
CLSTN1-203ENST00000435891 PNLIPRP2P54317 469 aa9.31□□□□□ -0.92
CLSTN1-203ENST00000435891 NXPH1P58417 271 aa9.31□□□□□ -0.92
CLSTN1-203ENST00000435891 DCAF7P61962 342 aa9.31□□□□□ -0.92
CLSTN1-203ENST00000435891 HNRNPKP61978 463 aaKnown RBP eCLIP9.31□□□□□ -0.92
CLSTN1-203ENST00000435891 BLOC1S1P78537 153 aa9.31□□□□□ -0.92
CLSTN1-203ENST00000435891 PABPC1L2AQ5JQF8 200 aa9.31□□□□□ -0.92
CLSTN1-203ENST00000435891 SLC38A9Q8NBW4 561 aa9.31□□□□□ -0.92
CLSTN1-203ENST00000435891 STK35Q8TDR2 534 aa9.31□□□□□ -0.92
CLSTN1-203ENST00000435891 MRPS24Q96EL2 167 aaKnown RBP9.31□□□□□ -0.92
CLSTN1-203ENST00000435891 MVB12AQ96EY5 273 aa9.31□□□□□ -0.92
CLSTN1-203ENST00000435891 NUDT22Q9BRQ3 303 aa9.31□□□□□ -0.92
CLSTN1-203ENST00000435891 RAB33BQ9H082 229 aa9.31□□□□□ -0.92
CLSTN1-203ENST00000435891 OPN4Q9UHM6 478 aa9.31□□□□□ -0.92
CLSTN1-203ENST00000435891 VDAC3Q9Y277 283 aa9.31□□□□□ -0.92
CLSTN1-203ENST00000435891 COL6A3P12111 3177 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms