RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 MRPS21P82921 87 aaKnown RBP12.46□□□□□ -0.41
SDC1-202ENST00000381150 SKP2Q13309 424 aa12.46□□□□□ -0.41
SDC1-202ENST00000381150 WDR38Q5JTN6 314 aa12.46□□□□□ -0.41
SDC1-202ENST00000381150 SLC22A18ASQ8N1D0 253 aa12.46□□□□□ -0.41
SDC1-202ENST00000381150 FRMD1Q8N878 549 aa12.46□□□□□ -0.41
SDC1-202ENST00000381150 FAM3CQ92520 227 aa12.46□□□□□ -0.41
SDC1-202ENST00000381150 PHYHIPQ92561 330 aa12.46□□□□□ -0.41
SDC1-202ENST00000381150 IP6K3Q96PC2 410 aa12.46□□□□□ -0.41
SDC1-202ENST00000381150 SPACA5Q96QH8 159 aa12.46□□□□□ -0.41
SDC1-202ENST00000381150 PAPOLGQ9BWT3 736 aaKnown RBP12.46□□□□□ -0.41
SDC1-202ENST00000381150 TRIM2Q9C040 744 aa12.46□□□□□ -0.41
SDC1-202ENST00000381150 SMIM6P0DI80 62 aa12.46□□□□□ -0.42
SDC1-202ENST00000381150 S100PP25815 95 aa12.46□□□□□ -0.42
SDC1-202ENST00000381150 HTR2CP28335 458 aa12.46□□□□□ -0.42
SDC1-202ENST00000381150 YPEL5P62699 121 aa12.46□□□□□ -0.42
SDC1-202ENST00000381150 ERV3-1Q14264 604 aa12.46□□□□□ -0.42
SDC1-202ENST00000381150 ZNHIT3Q15649 155 aaPredicted RBP12.46□□□□□ -0.42
SDC1-202ENST00000381150 ULK3Q6PHR2 472 aa12.46□□□□□ -0.42
SDC1-202ENST00000381150 PGAP1Q75T13 922 aa12.46□□□□□ -0.42
SDC1-202ENST00000381150 OR13C9Q8NGT0 318 aa12.46□□□□□ -0.42
SDC1-202ENST00000381150 TCTEX1D2Q8WW35 142 aa12.46□□□□□ -0.42
SDC1-202ENST00000381150 ARL5BQ96KC2 179 aa12.46□□□□□ -0.42
SDC1-202ENST00000381150 TGIF2Q9GZN2 237 aa12.46□□□□□ -0.42
SDC1-202ENST00000381150 C19orf53Q9UNZ5 99 aaPredicted RBP12.46□□□□□ -0.42
SDC1-202ENST00000381150 H0YGG7 62 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 CYR61O00622 381 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 UPK3AO75631 287 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 YIF1AO95070 293 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 S100A8P05109 93 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 DRD1P21728 446 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 RPS4Y1P22090 263 aaKnown RBP12.45□□□□□ -0.42
SDC1-202ENST00000381150 RAB2AP61019 212 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 ARF3P61204 181 aaPredicted RBP12.45□□□□□ -0.42
SDC1-202ENST00000381150 DEFA6Q01524 100 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 SAMD14Q8IZD0 417 aaPredicted RBP12.45□□□□□ -0.42
SDC1-202ENST00000381150 OR13C8Q8NGS7 320 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 ST7LQ8TDW4 575 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 NECAB3Q96P71 396 aaPredicted RBP12.45□□□□□ -0.42
SDC1-202ENST00000381150 UTP23Q9BRU9 249 aaKnown RBP12.45□□□□□ -0.42
SDC1-202ENST00000381150 TCEAL2Q9H3H9 227 aaPredicted RBP12.45□□□□□ -0.42
SDC1-202ENST00000381150 PIAS3Q9Y6X2 628 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 LYPD3O95274 346 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 GABRG2P18507 467 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 MGAT2Q10469 447 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 PMPCAQ10713 525 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 TSC22D1Q15714 1073 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 DEFB110Q30KQ9 67 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 Q6ZSR6 202 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 GPBAR1Q8TDU6 330 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 RRNAD1Q96FB5 475 aaKnown RBP12.45□□□□□ -0.42
SDC1-202ENST00000381150 MOGAT1Q96PD6 335 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 ZFYVE21Q9BQ24 234 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 MRI1Q9BV20 369 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 LYRM4Q9HD34 91 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 CENPMQ9NSP4 180 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 LRIT1Q9P2V4 623 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 AMDHD2Q9Y303 409 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 VPS13AQ96RL7 3174 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 A0A1W2PPC1 479 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 C9orf170A2RU37 121 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 FOSL1P15407 271 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 CD96P40200 585 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 DPY19L2P2Q6ZN68 376 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 LYG2Q86SG7 212 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 FJX1Q86VR8 437 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 COMMD2Q86X83 199 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 OR51F2Q8NH61 342 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 ZNF563Q8TA94 476 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 BAHD1Q8TBE0 780 aaPredicted RBP12.45□□□□□ -0.42
SDC1-202ENST00000381150 SPACA7Q96KW9 195 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 SEC11CQ9BY50 192 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 EPHA6Q9UF33 1036 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 HS3ST3A1Q9Y663 406 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 SPACA6W5XKT8 324 aa12.45□□□□□ -0.42
SDC1-202ENST00000381150 OR4C45A6NMZ5 311 aa12.44□□□□□ -0.42
SDC1-202ENST00000381150 COLCA2A8K830 154 aa12.44□□□□□ -0.42
SDC1-202ENST00000381150 HRKO00198 91 aa12.44□□□□□ -0.42
SDC1-202ENST00000381150 YKT6O15498 198 aa12.44□□□□□ -0.42
SDC1-202ENST00000381150 HCRTR1O43613 425 aa12.44□□□□□ -0.42
SDC1-202ENST00000381150 GNB3P16520 340 aa12.44□□□□□ -0.42
SDC1-202ENST00000381150 SGCAQ16586 387 aa12.44□□□□□ -0.42
SDC1-202ENST00000381150 MICBQ29980 383 aa12.44□□□□□ -0.42
SDC1-202ENST00000381150 RPL7L1Q6DKI1 246 aaKnown RBP12.44□□□□□ -0.42
SDC1-202ENST00000381150 MISPQ8IVT2 679 aa12.44□□□□□ -0.42
SDC1-202ENST00000381150 GPX8Q8TED1 209 aa12.44□□□□□ -0.42
SDC1-202ENST00000381150 RSC1A1Q92681 617 aa12.44□□□□□ -0.42
SDC1-202ENST00000381150 PHYHIPLQ96FC7 376 aa12.44□□□□□ -0.42
SDC1-202ENST00000381150 JSRP1Q96MG2 331 aaPredicted RBP12.44□□□□□ -0.42
SDC1-202ENST00000381150 INTS14Q96SY0 518 aa12.44□□□□□ -0.42
SDC1-202ENST00000381150 MMP26Q9NRE1 261 aa12.44□□□□□ -0.42
SDC1-202ENST00000381150 KLK13Q9UKR3 277 aa12.44□□□□□ -0.42
SDC1-202ENST00000381150 URGCP-MRPS24S4R325 110 aa12.44□□□□□ -0.42
SDC1-202ENST00000381150 C9JQL5 133 aa12.44□□□□□ -0.42
SDC1-202ENST00000381150 H7C1Q1 480 aa12.44□□□□□ -0.42
SDC1-202ENST00000381150 NME2P1O60361 137 aa12.44□□□□□ -0.42
SDC1-202ENST00000381150 KNG1P01042 644 aa12.44□□□□□ -0.42
SDC1-202ENST00000381150 PRH1P02810 166 aa12.44□□□□□ -0.42
SDC1-202ENST00000381150 RPS10P46783 165 aaKnown RBP12.44□□□□□ -0.42
SDC1-202ENST00000381150 PLAURQ03405 335 aa12.44□□□□□ -0.42
SDC1-202ENST00000381150 PRSS35Q8N3Z0 413 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms