RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 TMEM185AQ8NFB2 350 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 CADM4Q8NFZ8 388 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 C16orf52Q8NHV5 167 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 ZNF417Q8TAU3 575 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 SLC37A2Q8TED4 501 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 S100A16Q96FQ6 103 aaKnown RBP4.85□□□□□ -1.63
VPS50-202ENST00000305866 CMSS1Q9BQ75 279 aaKnown RBP4.85□□□□□ -1.63
VPS50-202ENST00000305866 RPP25Q9BUL9 199 aaKnown RBP4.85□□□□□ -1.63
VPS50-202ENST00000305866 ULBP3Q9BZM4 244 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 MFFQ9GZY8 342 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 OR10A5Q9H207 317 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 LIME1Q9H400 295 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 LRIT1Q9P2V4 623 aa4.85□□□□□ -1.63
VPS50-202ENST00000305866 TBC1D3DA0A087WVF3 549 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 A0A1W2PPC4 97 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 TBC1D3LB9A6J9 549 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 RAD1O60671 282 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 TBC1D3HP0C7X1 549 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 HOXB2P14652 356 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 CCL1P22362 96 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 CTSSP25774 331 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 AK4P27144 223 aaPredicted RBP4.84□□□□□ -1.63
VPS50-202ENST00000305866 LPAR6P43657 344 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 LUMP51884 338 aaPredicted RBP4.84□□□□□ -1.63
VPS50-202ENST00000305866 GPR85P60893 370 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 MC2RQ01718 297 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 SNTB1Q13884 538 aaKnown RBP4.84□□□□□ -1.63
VPS50-202ENST00000305866 NCOA6Q14686 2063 aaPredicted RBP4.84□□□□□ -1.63
VPS50-202ENST00000305866 SGCBQ16585 318 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 HIST3H3Q16695 136 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 ELP2Q6IA86 826 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 TBC1D3CQ6IPX1 549 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 MDGA2Q7Z553 956 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 OOSP2Q86WS3 158 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 TBC1D3Q8IZP1 549 aaPredicted RBP4.84□□□□□ -1.63
VPS50-202ENST00000305866 ZDHHC22Q8N966 263 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 SMRP1Q8NCR6 262 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 DUSP19Q8WTR2 217 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 SFT2D1Q8WV19 159 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 PPP1R1CQ8WVI7 109 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 TAAR8Q969N4 342 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 KTI12Q96EK9 354 aaPredicted RBP4.84□□□□□ -1.63
VPS50-202ENST00000305866 NAA11Q9BSU3 229 aaPredicted RBP4.84□□□□□ -1.63
VPS50-202ENST00000305866 BCL2L14Q9BZR8 327 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 GAREM1Q9H706 876 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 TUBA4BQ9H853 241 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 Q9N2J8 555 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 PNRC2Q9NPJ4 139 aaKnown RBP4.84□□□□□ -1.63
VPS50-202ENST00000305866 FAM206AQ9NX38 181 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 NKIRAS2Q9NYR9 191 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 FBXO9Q9UK97 447 aaPredicted RBP4.84□□□□□ -1.63
VPS50-202ENST00000305866 AMDHD2Q9Y303 409 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 TMEM14AQ9Y6G1 99 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 FRYQ5TBA9 3013 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 ZNF208O43345 1280 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 LRP3O75074 770 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 KLF8O95600 359 aaPredicted RBP4.84□□□□□ -1.63
VPS50-202ENST00000305866 PNLIPP16233 465 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 PTGFRP43088 359 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 ALDH3B1P43353 468 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 ERVK-25P63136 954 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 SCRN3Q0VDG4 424 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 SLC17A1Q14916 467 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 ZNHIT3Q15649 155 aaPredicted RBP4.84□□□□□ -1.63
VPS50-202ENST00000305866 TMEM88Q6PEY1 159 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 Q6ZSR6 202 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 SYT13Q7L8C5 426 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 OR8K3Q8NH51 312 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 OR5AK2Q8NH90 309 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 SLC25A43Q8WUT9 341 aaPredicted RBP4.84□□□□□ -1.63
VPS50-202ENST00000305866 HIST1H2BAQ96A08 127 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 FAM3DQ96BQ1 224 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 GNRHR2Q96P88 292 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 VRK1Q99986 396 aaPredicted RBP4.84□□□□□ -1.63
VPS50-202ENST00000305866 UQCC1Q9NVA1 299 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 SLC39A1Q9NY26 324 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 TAS2R10Q9NYW0 307 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 OR5AC2Q9NZP5 309 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 OSGIN2Q9Y236 505 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 PCDHGA1Q9Y5H4 931 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 SMG1Q96Q15 3661 aaKnown RBP4.84□□□□□ -1.63
VPS50-202ENST00000305866 MUC3AQ02505 3323 aa4.84□□□□□ -1.63
VPS50-202ENST00000305866 ANXA2P07355 339 aaKnown RBP4.84□□□□□ -1.64
VPS50-202ENST00000305866 ATP6V1E1P36543 226 aa4.84□□□□□ -1.64
VPS50-202ENST00000305866 RPS27P42677 84 aaKnown RBP4.84□□□□□ -1.64
VPS50-202ENST00000305866 TMEM50BP56557 158 aa4.84□□□□□ -1.64
VPS50-202ENST00000305866 FOXF1Q12946 379 aa4.84□□□□□ -1.64
VPS50-202ENST00000305866 ANKRD55Q3KP44 614 aa4.84□□□□□ -1.64
VPS50-202ENST00000305866 KRTAP27-1Q3LI81 207 aa4.84□□□□□ -1.64
VPS50-202ENST00000305866 TMEM244Q5VVB8 128 aa4.84□□□□□ -1.64
VPS50-202ENST00000305866 YAF2Q8IY57 180 aa4.84□□□□□ -1.64
VPS50-202ENST00000305866 CCDC36Q8IYA8 594 aa4.84□□□□□ -1.64
VPS50-202ENST00000305866 D2HGDHQ8N465 521 aa4.84□□□□□ -1.64
VPS50-202ENST00000305866 FAM89BQ8N5H3 189 aa4.84□□□□□ -1.64
VPS50-202ENST00000305866 ZNF321PQ8N8H1 164 aa4.84□□□□□ -1.64
VPS50-202ENST00000305866 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.84□□□□□ -1.64
VPS50-202ENST00000305866 STEAP2Q8NFT2 490 aa4.84□□□□□ -1.64
VPS50-202ENST00000305866 DNASE2BQ8WZ79 361 aa4.84□□□□□ -1.64
VPS50-202ENST00000305866 KXD1Q9BQD3 176 aa4.84□□□□□ -1.64
VPS50-202ENST00000305866 SLC25A21Q9BQT8 299 aaPredicted RBP4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms