RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 LSM6P62312 80 aaKnown RBP17.36■□□□□ 0.37
TNFRSF1A-201ENST00000162749 SGCAQ16586 387 aa17.36■□□□□ 0.37
TNFRSF1A-201ENST00000162749 ZADH2Q8N4Q0 377 aa17.36■□□□□ 0.37
TNFRSF1A-201ENST00000162749 OR51A4Q8NGJ6 313 aa17.36■□□□□ 0.37
TNFRSF1A-201ENST00000162749 OR2AJ1Q8NGZ0 328 aa17.36■□□□□ 0.37
TNFRSF1A-201ENST00000162749 OR10AC1Q8NH08 325 aa17.36■□□□□ 0.37
TNFRSF1A-201ENST00000162749 PPP1R14AQ96A00 147 aa17.36■□□□□ 0.37
TNFRSF1A-201ENST00000162749 TMEM45BQ96B21 275 aa17.36■□□□□ 0.37
TNFRSF1A-201ENST00000162749 WDYHV1Q96HA8 205 aa17.36■□□□□ 0.37
TNFRSF1A-201ENST00000162749 CRLF2Q9HC73 371 aa17.36■□□□□ 0.37
TNFRSF1A-201ENST00000162749 SLC22A13Q9Y226 551 aa17.36■□□□□ 0.37
TNFRSF1A-201ENST00000162749 PCDHGA9Q9Y5G4 932 aaKnown RBP17.36■□□□□ 0.37
TNFRSF1A-201ENST00000162749 TRAV1-2A0A0B4J238 106 aa17.35■□□□□ 0.37
TNFRSF1A-201ENST00000162749 PIN1P1O15428 100 aa17.35■□□□□ 0.37
TNFRSF1A-201ENST00000162749 IGHG3P01860 377 aa17.35■□□□□ 0.37
TNFRSF1A-201ENST00000162749 H2BFMP0C1H6 154 aa17.35■□□□□ 0.37
TNFRSF1A-201ENST00000162749 PTBP1P26599 531 aaKnown RBP eCLIP17.35■□□□□ 0.371e-7■■■□□ 14.7
TNFRSF1A-201ENST00000162749 KIR2DL3P43628 341 aa17.35■□□□□ 0.37
TNFRSF1A-201ENST00000162749 Q499Y3 187 aa17.35■□□□□ 0.37
TNFRSF1A-201ENST00000162749 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.35■□□□□ 0.37
TNFRSF1A-201ENST00000162749 TPRA1Q86W33 373 aa17.35■□□□□ 0.37
TNFRSF1A-201ENST00000162749 CATSPERDQ86XM0 798 aa17.35■□□□□ 0.37
TNFRSF1A-201ENST00000162749 PHYHIPQ92561 330 aa17.35■□□□□ 0.37
TNFRSF1A-201ENST00000162749 ORAI1Q96D31 301 aa17.35■□□□□ 0.37
TNFRSF1A-201ENST00000162749 DERL3Q96Q80 235 aa17.35■□□□□ 0.37
TNFRSF1A-201ENST00000162749 NOX4Q9NPH5 578 aa17.35■□□□□ 0.37
TNFRSF1A-201ENST00000162749 GTF2A1LQ9UNN4 478 aa17.35■□□□□ 0.37
TNFRSF1A-201ENST00000162749 EMC9Q9Y3B6 208 aa17.35■□□□□ 0.37
TNFRSF1A-201ENST00000162749 R4GMQ9 66 aa17.35■□□□□ 0.37
TNFRSF1A-201ENST00000162749 RP1L1Q8IWN7 2480 aaPredicted RBP17.35■□□□□ 0.37
TNFRSF1A-201ENST00000162749 GPR171O14626 319 aa17.35■□□□□ 0.37
TNFRSF1A-201ENST00000162749 RER1O15258 196 aa17.35■□□□□ 0.37
TNFRSF1A-201ENST00000162749 SLC19A2O60779 497 aa17.35■□□□□ 0.37
TNFRSF1A-201ENST00000162749 CCNKO75909 580 aa17.35■□□□□ 0.37
TNFRSF1A-201ENST00000162749 HSD17B12Q53GQ0 312 aa17.35■□□□□ 0.37
TNFRSF1A-201ENST00000162749 ZNF544Q6NX49 715 aa17.35■□□□□ 0.37
TNFRSF1A-201ENST00000162749 RHOUQ7L0Q8 258 aa17.35■□□□□ 0.37
TNFRSF1A-201ENST00000162749 LINGO2Q7L985 606 aa17.35■□□□□ 0.37
TNFRSF1A-201ENST00000162749 SYT9Q86SS6 491 aa17.35■□□□□ 0.37
TNFRSF1A-201ENST00000162749 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.35■□□□□ 0.37
TNFRSF1A-201ENST00000162749 SPACA3Q8IXA5 215 aa17.35■□□□□ 0.37
TNFRSF1A-201ENST00000162749 OR6F1Q8NGZ6 308 aa17.35■□□□□ 0.37
TNFRSF1A-201ENST00000162749 NOSIPQ9Y314 301 aaKnown RBP17.35■□□□□ 0.37
TNFRSF1A-201ENST00000162749 TRBV5-5A0A0J9YX44 114 aa17.34■□□□□ 0.37
TNFRSF1A-201ENST00000162749 MEIOCA2RUB1 952 aa17.34■□□□□ 0.37
TNFRSF1A-201ENST00000162749 ZNF84P51523 738 aa17.34■□□□□ 0.37
TNFRSF1A-201ENST00000162749 NKX2-5P52952 324 aaPredicted RBP17.34■□□□□ 0.37
TNFRSF1A-201ENST00000162749 SFXN4Q6P4A7 337 aa17.34■□□□□ 0.37
TNFRSF1A-201ENST00000162749 PRRG4Q9BZD6 226 aa17.34■□□□□ 0.37
TNFRSF1A-201ENST00000162749 PNRC2Q9NPJ4 139 aaKnown RBP17.34■□□□□ 0.37
TNFRSF1A-201ENST00000162749 G6PC2Q9NQR9 355 aa17.34■□□□□ 0.37
TNFRSF1A-201ENST00000162749 CHD8Q9HCK8 2581 aa17.34■□□□□ 0.37
TNFRSF1A-201ENST00000162749 TMEM269A0A1B0GVZ9 245 aa17.33■□□□□ 0.37
TNFRSF1A-201ENST00000162749 FAM25AB3EWG3 89 aa17.33■□□□□ 0.37
TNFRSF1A-201ENST00000162749 FAM25CB3EWG5 89 aa17.33■□□□□ 0.37
TNFRSF1A-201ENST00000162749 FAM25GB3EWG6 89 aa17.33■□□□□ 0.37
TNFRSF1A-201ENST00000162749 ZNF878C9JN71 531 aa17.33■□□□□ 0.37
TNFRSF1A-201ENST00000162749 PDGFAP04085 211 aa17.33■□□□□ 0.37
TNFRSF1A-201ENST00000162749 MRPS34P82930 218 aaKnown RBP17.33■□□□□ 0.37
TNFRSF1A-201ENST00000162749 ENDOGQ14249 297 aaKnown RBP17.33■□□□□ 0.37
TNFRSF1A-201ENST00000162749 ZNF169Q14929 603 aaPredicted RBP17.33■□□□□ 0.37
TNFRSF1A-201ENST00000162749 SLC25A35Q3KQZ1 300 aa17.33■□□□□ 0.37
TNFRSF1A-201ENST00000162749 RIPPLY2Q5TAB7 128 aa17.33■□□□□ 0.37
TNFRSF1A-201ENST00000162749 TUSC5Q8IXB3 177 aa17.33■□□□□ 0.37
TNFRSF1A-201ENST00000162749 GPR137CQ8N3F9 429 aa17.33■□□□□ 0.37
TNFRSF1A-201ENST00000162749 BCO1Q9HAY6 547 aa17.33■□□□□ 0.37
TNFRSF1A-201ENST00000162749 EMC3Q9P0I2 261 aa17.33■□□□□ 0.37
TNFRSF1A-201ENST00000162749 EXTL2Q9UBQ6 330 aa17.33■□□□□ 0.37
TNFRSF1A-201ENST00000162749 ADAM30Q9UKF2 790 aa17.33■□□□□ 0.37
TNFRSF1A-201ENST00000162749 ZZEF1O43149 2961 aa17.33■□□□□ 0.37
TNFRSF1A-201ENST00000162749 H3BSH0 61 aa17.33■□□□□ 0.36
TNFRSF1A-201ENST00000162749 MRPL33O75394 65 aaKnown RBP17.33■□□□□ 0.36
TNFRSF1A-201ENST00000162749 WISP2O76076 250 aa17.33■□□□□ 0.36
TNFRSF1A-201ENST00000162749 SRMP19623 302 aa17.33■□□□□ 0.36
TNFRSF1A-201ENST00000162749 DCTDP32321 178 aa17.33■□□□□ 0.36
TNFRSF1A-201ENST00000162749 MMP16P51512 607 aa17.33■□□□□ 0.36
TNFRSF1A-201ENST00000162749 CCDC92Q53HC0 331 aaPredicted RBP17.33■□□□□ 0.36
TNFRSF1A-201ENST00000162749 CHMP1BQ7LBR1 199 aa17.33■□□□□ 0.36
TNFRSF1A-201ENST00000162749 LRRC18Q8N456 261 aa17.33■□□□□ 0.36
TNFRSF1A-201ENST00000162749 GPR148Q8TDV2 347 aa17.33■□□□□ 0.36
TNFRSF1A-201ENST00000162749 KCTD12Q96CX2 325 aaKnown RBP17.33■□□□□ 0.36
TNFRSF1A-201ENST00000162749 SLX1AQ9BQ83 275 aa17.33■□□□□ 0.36
TNFRSF1A-201ENST00000162749 CYSLTR2Q9NS75 346 aa17.33■□□□□ 0.36
TNFRSF1A-201ENST00000162749 CAMK2AQ9UQM7 478 aa17.33■□□□□ 0.36
TNFRSF1A-201ENST00000162749 A0A0G2JMP0 313 aa17.32■□□□□ 0.36
TNFRSF1A-201ENST00000162749 A0A0X1KG70 313 aa17.32■□□□□ 0.36
TNFRSF1A-201ENST00000162749 EIF4EP06730 217 aaKnown RBP17.32■□□□□ 0.36
TNFRSF1A-201ENST00000162749 RAB3BP20337 219 aa17.32■□□□□ 0.36
TNFRSF1A-201ENST00000162749 SOX2P48431 317 aa17.32■□□□□ 0.36
TNFRSF1A-201ENST00000162749 TRIQKQ629K1 86 aa17.32■□□□□ 0.36
TNFRSF1A-201ENST00000162749 OR4M2Q8NGB6 313 aa17.32■□□□□ 0.36
TNFRSF1A-201ENST00000162749 CPT1CQ8TCG5 803 aa17.32■□□□□ 0.36
TNFRSF1A-201ENST00000162749 TAAR6Q96RI8 345 aa17.32■□□□□ 0.36
TNFRSF1A-201ENST00000162749 KCNJ15Q99712 375 aa17.32■□□□□ 0.36
TNFRSF1A-201ENST00000162749 ITGB1BP2Q9UKP3 347 aa17.32■□□□□ 0.36
TNFRSF1A-201ENST00000162749 CLEC4AQ9UMR7 237 aa17.32■□□□□ 0.36
TNFRSF1A-201ENST00000162749 TLN1Q9Y490 2541 aaKnown RBP17.32■□□□□ 0.36
TNFRSF1A-201ENST00000162749 A0A0B4J293 547 aa17.32■□□□□ 0.36
TNFRSF1A-201ENST00000162749 PAHP00439 452 aa17.32■□□□□ 0.36
TNFRSF1A-201ENST00000162749 MAPK3P27361 379 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms