RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 IGHG1P01857 330 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 PRKAR1AP10644 381 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 EDNRAP25101 427 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 GDF1P27539 372 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 TNFSF8P32971 234 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 THBS2P35442 1172 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 EIF2S3P41091 472 aaKnown RBP5.78□□□□□ -1.48
CAPN3-210ENST00000561817 CASRP41180 1078 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 STARP49675 285 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 LHX2P50458 406 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 RORCP51449 518 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 CAV3P56539 151 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 CLDN18P56856 261 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 SCAND1P57086 179 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 CSNK2A1P68400 391 aaPredicted RBP5.78□□□□□ -1.48
CAPN3-210ENST00000561817 GLO1Q04760 184 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 MXD1Q05195 221 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 HNRNPA0Q13151 305 aaKnown RBP5.78□□□□□ -1.48
CAPN3-210ENST00000561817 CAMK2DQ13557 499 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 ALKBH1Q13686 389 aaKnown RBP5.78□□□□□ -1.48
CAPN3-210ENST00000561817 INAQ16352 499 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 ACSM3Q53FZ2 586 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 ZMAT1Q5H9K5 638 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 PHYHD1Q5SRE7 291 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 THEM4Q5T1C6 240 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 C10orf128Q5T292 105 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 TMEM225Q6GV28 225 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 SLC25A25Q6KCM7 469 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 SLC18B1Q6NT16 456 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 DNM1P34Q6PK57 102 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 ESPNLQ6ZVH7 1005 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 CEACAM19Q7Z692 300 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 KRTAP1-3Q8IUG1 177 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 LURAP1LQ8IV03 231 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 CROCCP3Q8IVE0 287 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 GLB1L2Q8IW92 636 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 ZNF679Q8IYX0 411 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 TMEM251Q8N6I4 163 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 ZFP62Q8NB50 900 aaPredicted RBP5.78□□□□□ -1.48
CAPN3-210ENST00000561817 CLEC1AQ8NC01 280 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 IL17RDQ8NFM7 739 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 OR10S1Q8NGN2 331 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 OR2G2Q8NGZ5 317 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 OR2V1Q8NHB1 315 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 OR14L1PQ8NHC6 308 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 NEIL3Q8TAT5 605 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 FNDC8Q8TC99 324 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 HAVCR2Q8TDQ0 301 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 RNF128Q8TEB7 428 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 ASB17Q8WXJ9 295 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 C11orf40Q8WZ69 217 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 MCHR2Q969V1 340 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 MRPL48Q96GC5 212 aaKnown RBP5.78□□□□□ -1.48
CAPN3-210ENST00000561817 C4orf45Q96LM5 186 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 SFXN2Q96NB2 322 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 ZNF385AQ96PM9 386 aaKnown RBP5.78□□□□□ -1.48
CAPN3-210ENST00000561817 GFI1Q99684 422 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 ATF6BQ99941 703 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 PDCD1LG2Q9BQ51 273 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 KRTAP4-12Q9BQ66 201 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 NAA11Q9BSU3 229 aaPredicted RBP5.78□□□□□ -1.48
CAPN3-210ENST00000561817 ABHD6Q9BV23 337 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 SF3B5Q9BWJ5 86 aaKnown RBP5.78□□□□□ -1.48
CAPN3-210ENST00000561817 TTTY12Q9BZ98 90 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 RERGLQ9H628 205 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 ELOVL3Q9HB03 270 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 ABI3Q9P2A4 366 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 CYB5R1Q9UHQ9 305 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 PEX16Q9Y5Y5 336 aa5.78□□□□□ -1.48
CAPN3-210ENST00000561817 NCOA6Q14686 2063 aaPredicted RBP5.78□□□□□ -1.48
CAPN3-210ENST00000561817 IGF2RP11717 2491 aa5.77□□□□□ -1.48
CAPN3-210ENST00000561817 MAP1BP46821 2468 aaKnown RBP5.77□□□□□ -1.48
CAPN3-210ENST00000561817 TNRC6AQ8NDV7 1962 aaKnown RBP5.77□□□□□ -1.49
CAPN3-210ENST00000561817 CEP295Q9C0D2 2601 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 IGKV3D-15A0A087WSY6 115 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 TRBV2A0A0J9YWF9 115 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 SMIM30A4D0T7 59 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 TMEM8BA6NDV4 472 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 ANKRD61A6NGH8 418 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 CXCL13O43927 109 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 CYTIPO60759 359 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 GATBO75879 557 aaKnown RBP5.77□□□□□ -1.49
CAPN3-210ENST00000561817 NCR1O76036 304 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 KRT8P05787 483 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 SPARCP09486 303 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 TACSTD2P09758 323 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 ZNF708P17019 499 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 ZNF43P17038 809 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 LAP3P28838 519 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 CD40LGP29965 261 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 SOX6P35712 828 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 RFC3P40938 356 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 MAGEB1P43366 347 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 MEOX1P50221 254 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 TNFSF10P50591 281 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 CCR9P51686 369 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 PPP5CP53041 499 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 RRADP55042 308 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 CASP6P55212 293 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 CLDN17P56750 224 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms