RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 INAQ16352 499 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 SGCAQ16586 387 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 MESTQ5EB52 335 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 PHYHD1Q5SRE7 291 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 ZNF362Q5T0B9 420 aaPredicted RBP3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 ARMC4Q5T2S8 1044 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 C1orf185Q5T7R7 199 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 MEDAGQ5VYS4 303 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 GPR139Q6DWJ6 353 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 LAIR2Q6ISS4 152 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 UGT2A3Q6UWM9 527 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 NCCRP1Q6ZVX7 275 aaPredicted RBP3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 MEPCEQ7L2J0 689 aaKnown RBP3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 SHFQ7M4L6 423 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 FAM122BQ7Z309 247 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 NUFIP2Q7Z417 695 aaKnown RBP3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 GCNT2Q8N0V5 402 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 SLC43A2Q8N370 569 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 GPR137CQ8N3F9 429 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 STX19Q8N4C7 294 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 RPRMLQ8N4K4 120 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 C11orf44Q8N8P7 122 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 CNEP1R1Q8N9A8 125 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 ZIC4Q8N9L1 334 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 C9orf106Q8NAJ2 232 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 NPEPL1Q8NDH3 523 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 ZNF540Q8NDQ6 660 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 ADPRHL1Q8NDY3 354 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 PROKR2Q8NFJ6 384 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 OR8J1Q8NGP2 316 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 OR6K6Q8NGW6 343 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 FAM57AQ8TBR7 257 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 APH1BQ8WW43 257 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 ZNRF4Q8WWF5 429 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 TRUB1Q8WWH5 349 aaKnown RBP3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 GGHQ92820 318 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 PTP4A1Q93096 173 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 ZMYND19Q96E35 227 aaPredicted RBP3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 RNFT2Q96EX2 444 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 ADAD1Q96M93 576 aaKnown RBP3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 ZNF582Q96NG8 517 aaPredicted RBP3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 GPX7Q96SL4 187 aaPredicted RBP3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 TBX5Q99593 518 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 THAP7Q9BT49 309 aaPredicted RBP3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 SF3B5Q9BWJ5 86 aaKnown RBP3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 RBM24Q9BX46 236 aaKnown RBP3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 HCAR1Q9BXC0 346 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 NUAK2Q9H093 628 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 SYT4Q9H2B2 425 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 KLK15Q9H2R5 256 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 CMC2Q9NRP2 79 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 ASB6Q9NWX5 421 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 PAQR5Q9NXK6 330 aaPredicted RBP3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 KLHL9Q9P2J3 617 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 B3GAT1Q9P2W7 334 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 ERVK-18Q9QC07 812 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 UPB1Q9UBR1 384 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 B9D1Q9UPM9 204 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 OSGIN2Q9Y236 505 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 TPRKBQ9Y3C4 175 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 RPL36Q9Y3U8 105 aaKnown RBP3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 HSPE1-MOB4S4R3N1 261 aa3.59□□□□□ -1.83
TMEM39A-204ENST00000468545 ZFHX4Q86UP3 3567 aa3.59□□□□□ -1.84
TMEM39A-204ENST00000468545 IGF2RP11717 2491 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 IGKV1D-43A0A0B4J1Z2 117 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 SLC22A23A1A5C7 686 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 PRSS37A4D1T9 235 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 MAGEA13PA6NCF6 341 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 ZNF716A6NP11 495 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 E9PQ18 207 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 SLC1A7O00341 560 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 DCTN6O00399 190 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 GPR171O14626 319 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 DNPH1O43598 174 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 TRAF3IP2O43734 574 aaPredicted RBP3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 SLC19A2O60779 497 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 KHDRBS3O75525 346 aaKnown RBP3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 UPK3AO75631 287 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 SEC14L2O76054 403 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 GLCEO94923 617 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 MPZL1O95297 269 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 TXNDC12O95881 172 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 PRB1P04280 392 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 HNRNPCP07910 306 aaKnown RBP eCLIP3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 LYNP07948 512 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 STSP08842 583 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 TSPAN19P0C672 248 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 TMIGD3P0DMS9 266 aaPredicted RBP3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 TMEM225BP0DP42 221 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 APEHP13798 732 aaKnown RBP3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 GABRA1P14867 456 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 ATP6V1B1P15313 513 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 CTLA4P16410 223 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 ZNF823P16415 610 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 SPI1P17947 270 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 EDNRAP25101 427 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 CDAP32320 146 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 NAA10P41227 235 aaPredicted RBP3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 RPS27P42677 84 aaKnown RBP3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 GUCA1AP43080 201 aaPredicted RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms