RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 OR1P1Q8NH06 330 aa1.92□□□□□ -2.1
SMC4-207ENST00000467263 RSPH1Q8WYR4 309 aa1.92□□□□□ -2.1
SMC4-207ENST00000467263 DUS3LQ96G46 650 aaKnown RBP1.92□□□□□ -2.1
SMC4-207ENST00000467263 ZBTB18Q99592 522 aa1.92□□□□□ -2.1
SMC4-207ENST00000467263 HSD17B10Q99714 261 aaKnown RBP1.92□□□□□ -2.1
SMC4-207ENST00000467263 CRCT1Q9UGL9 99 aa1.92□□□□□ -2.1
SMC4-207ENST00000467263 KCNE3Q9Y6H6 103 aa1.92□□□□□ -2.1
SMC4-207ENST00000467263 TSPOAP1O95153 1857 aa1.92□□□□□ -2.1
SMC4-207ENST00000467263 LRRIQ3A6PVS8 624 aaPredicted RBP1.91□□□□□ -2.1
SMC4-207ENST00000467263 VGLL3A8MV65 326 aa1.91□□□□□ -2.1
SMC4-207ENST00000467263 CHST10O43529 356 aa1.91□□□□□ -2.1
SMC4-207ENST00000467263 TSPAN13O95857 204 aa1.91□□□□□ -2.1
SMC4-207ENST00000467263 CST1P01037 141 aa1.91□□□□□ -2.1
SMC4-207ENST00000467263 SERPINA5P05154 406 aa1.91□□□□□ -2.1
SMC4-207ENST00000467263 CRYGBP07316 175 aa1.91□□□□□ -2.1
SMC4-207ENST00000467263 PABPC4LP0CB38 370 aaKnown RBP1.91□□□□□ -2.1
SMC4-207ENST00000467263 ZNF43P17038 809 aa1.91□□□□□ -2.1
SMC4-207ENST00000467263 GGT1P19440 569 aa1.91□□□□□ -2.1
SMC4-207ENST00000467263 ME2P23368 584 aa1.91□□□□□ -2.1
SMC4-207ENST00000467263 CHMLP26374 656 aa1.91□□□□□ -2.1
SMC4-207ENST00000467263 CSNK1EP49674 416 aaKnown RBP1.91□□□□□ -2.1
SMC4-207ENST00000467263 P2RX1P51575 399 aa1.91□□□□□ -2.1
SMC4-207ENST00000467263 VSX2P58304 361 aaPredicted RBP1.91□□□□□ -2.1
SMC4-207ENST00000467263 RPL23AP62750 156 aaKnown RBP1.91□□□□□ -2.1
SMC4-207ENST00000467263 CRADDP78560 199 aa1.91□□□□□ -2.1
SMC4-207ENST00000467263 SPIN3Q5JUX0 258 aa1.91□□□□□ -2.1
SMC4-207ENST00000467263 ST20-AS1Q8NBB2 130 aa1.91□□□□□ -2.1
SMC4-207ENST00000467263 GPR151Q8TDV0 419 aa1.91□□□□□ -2.1
SMC4-207ENST00000467263 SLC29A1Q99808 456 aa1.91□□□□□ -2.1
SMC4-207ENST00000467263 MICU1Q9BPX6 476 aa1.91□□□□□ -2.1
SMC4-207ENST00000467263 GCOM2Q9BZD3 368 aaPredicted RBP1.91□□□□□ -2.1
SMC4-207ENST00000467263 TMEM9BQ9NQ34 198 aa1.91□□□□□ -2.1
SMC4-207ENST00000467263 C8orf17Q9NRJ1 99 aa1.91□□□□□ -2.1
SMC4-207ENST00000467263 DHCR7Q9UBM7 475 aaKnown RBP1.91□□□□□ -2.1
SMC4-207ENST00000467263 VANGL2Q9ULK5 521 aa1.91□□□□□ -2.1
SMC4-207ENST00000467263 STARD10Q9Y365 291 aa1.91□□□□□ -2.1
SMC4-207ENST00000467263 SCN4AP35499 1836 aa1.91□□□□□ -2.1
SMC4-207ENST00000467263 TRAV19A0A0A6YYK7 116 aa1.9□□□□□ -2.11
SMC4-207ENST00000467263 CENPVL3A0A0U1RRI6 287 aa1.9□□□□□ -2.11
SMC4-207ENST00000467263 DNASE2O00115 360 aaPredicted RBP1.9□□□□□ -2.11
SMC4-207ENST00000467263 RAB29O14966 203 aa1.9□□□□□ -2.11
SMC4-207ENST00000467263 PALMO75781 387 aa1.9□□□□□ -2.11
SMC4-207ENST00000467263 SERPINA3P01011 423 aa1.9□□□□□ -2.11
SMC4-207ENST00000467263 ACSM4P0C7M7 580 aa1.9□□□□□ -2.11
SMC4-207ENST00000467263 COL8A2P25067 703 aa1.9□□□□□ -2.11
SMC4-207ENST00000467263 LOXP28300 417 aaPredicted RBP1.9□□□□□ -2.11
SMC4-207ENST00000467263 TMED10P49755 219 aaKnown RBP1.9□□□□□ -2.11
SMC4-207ENST00000467263 GDI2P50395 445 aaKnown RBP1.9□□□□□ -2.11
SMC4-207ENST00000467263 ADARB1P78563 741 aaKnown RBP1.9□□□□□ -2.11
SMC4-207ENST00000467263 IL15RAQ13261 267 aa1.9□□□□□ -2.11
SMC4-207ENST00000467263 ZMYND11Q15326 602 aa1.9□□□□□ -2.11
SMC4-207ENST00000467263 OR7A5Q15622 319 aa1.9□□□□□ -2.11
SMC4-207ENST00000467263 RNASE13Q5GAN3 156 aaKnown RBP1.9□□□□□ -2.11
SMC4-207ENST00000467263 TCEAL5Q5H9L2 206 aa1.9□□□□□ -2.11
SMC4-207ENST00000467263 PRAMEF5Q5TYX0 476 aa1.9□□□□□ -2.11
SMC4-207ENST00000467263 PRAMEF6Q5VXH4 476 aa1.9□□□□□ -2.11
SMC4-207ENST00000467263 UBE2J2Q8N2K1 259 aa1.9□□□□□ -2.11
SMC4-207ENST00000467263 SPATA4Q8NEY3 305 aa1.9□□□□□ -2.11
SMC4-207ENST00000467263 TTLQ8NG68 377 aa1.9□□□□□ -2.11
SMC4-207ENST00000467263 OR2A1Q8NGT9 310 aa1.9□□□□□ -2.11
SMC4-207ENST00000467263 TCEAL3Q969E4 200 aa1.9□□□□□ -2.11
SMC4-207ENST00000467263 RBBP8Q99708 897 aa1.9□□□□□ -2.11
SMC4-207ENST00000467263 LHX5Q9H2C1 402 aa1.9□□□□□ -2.11
SMC4-207ENST00000467263 SAMSN1Q9NSI8 373 aaKnown RBP1.9□□□□□ -2.11
SMC4-207ENST00000467263 PSMC3IPQ9P2W1 217 aaPredicted RBP1.9□□□□□ -2.11
SMC4-207ENST00000467263 CBY1Q9Y3M2 126 aa1.9□□□□□ -2.11
SMC4-207ENST00000467263 CSDC2Q9Y534 153 aaKnown RBP1.9□□□□□ -2.11
SMC4-207ENST00000467263 NID2Q14112 1375 aa1.89□□□□□ -2.11
SMC4-207ENST00000467263 ZNF98A6NK75 572 aa1.89□□□□□ -2.11
SMC4-207ENST00000467263 CXCL11O14625 94 aa1.89□□□□□ -2.11
SMC4-207ENST00000467263 IGLV3-25P01717 112 aa1.89□□□□□ -2.11
SMC4-207ENST00000467263 CTSLP07711 333 aa1.89□□□□□ -2.11
SMC4-207ENST00000467263 ANXA5P08758 320 aa1.89□□□□□ -2.11
SMC4-207ENST00000467263 TNNI1P19237 187 aa1.89□□□□□ -2.11
SMC4-207ENST00000467263 NCF2P19878 526 aaPredicted RBP1.89□□□□□ -2.11
SMC4-207ENST00000467263 TGFBR1P36897 503 aa1.89□□□□□ -2.11
SMC4-207ENST00000467263 PPP1CBP62140 327 aa1.89□□□□□ -2.11
SMC4-207ENST00000467263 TGM3Q08188 693 aa1.89□□□□□ -2.11
SMC4-207ENST00000467263 QPRTQ15274 297 aa1.89□□□□□ -2.11
SMC4-207ENST00000467263 ZNF726P1Q15940 193 aa1.89□□□□□ -2.11
SMC4-207ENST00000467263 GPR107Q5VW38 600 aa1.89□□□□□ -2.11
SMC4-207ENST00000467263 RNASEKQ6P5S7 137 aaKnown RBP1.89□□□□□ -2.11
SMC4-207ENST00000467263 SASS6Q6UVJ0 657 aa1.89□□□□□ -2.11
SMC4-207ENST00000467263 NKAIN4Q8IVV8 208 aa1.89□□□□□ -2.11
SMC4-207ENST00000467263 COX18Q8N8Q8 333 aa1.89□□□□□ -2.11
SMC4-207ENST00000467263 PRELID2Q8N945 189 aa1.89□□□□□ -2.11
SMC4-207ENST00000467263 TMEM104Q8NE00 496 aa1.89□□□□□ -2.11
SMC4-207ENST00000467263 KIFAP3Q92845 792 aa1.89□□□□□ -2.11
SMC4-207ENST00000467263 NT5C3BQ969T7 300 aa1.89□□□□□ -2.11
SMC4-207ENST00000467263 KRTAP4-1Q9BYQ7 146 aa1.89□□□□□ -2.11
SMC4-207ENST00000467263 DHX35Q9H5Z1 703 aaKnown RBP1.89□□□□□ -2.11
SMC4-207ENST00000467263 ZNF586Q9NXT0 402 aa1.89□□□□□ -2.11
SMC4-207ENST00000467263 PISDQ9UG56 409 aa1.89□□□□□ -2.11
SMC4-207ENST00000467263 CARHSP1Q9Y2V2 147 aaKnown RBP1.89□□□□□ -2.11
SMC4-207ENST00000467263 TRAV6A0A075B6T7 132 aa1.88□□□□□ -2.11
SMC4-207ENST00000467263 IGHV3OR16-8A0A075B7F1 116 aa1.88□□□□□ -2.11
SMC4-207ENST00000467263 IGKV2-24A0A0C4DH68 120 aa1.88□□□□□ -2.11
SMC4-207ENST00000467263 BTNL10A8MVZ5 291 aa1.88□□□□□ -2.11
SMC4-207ENST00000467263 H7C417 338 aa1.88□□□□□ -2.11
SMC4-207ENST00000467263 NVLO15381 856 aaKnown RBP1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms