RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 NR2C2APQ86WQ0 139 aa11.16□□□□□ -0.62
TRIM39-204ENST00000396548 SLC22A24Q8N4F4 322 aa11.16□□□□□ -0.62
TRIM39-204ENST00000396548 C9orf106Q8NAJ2 232 aa11.16□□□□□ -0.62
TRIM39-204ENST00000396548 OR5M9Q8NGP3 310 aa11.16□□□□□ -0.62
TRIM39-204ENST00000396548 FOXB1Q99853 325 aa11.16□□□□□ -0.62
TRIM39-204ENST00000396548 LUZP4Q9P127 313 aa11.16□□□□□ -0.62
TRIM39-204ENST00000396548 ZNF878C9JN71 531 aa11.16□□□□□ -0.62
TRIM39-204ENST00000396548 OTX1P32242 354 aaPredicted RBP11.16□□□□□ -0.62
TRIM39-204ENST00000396548 SDC2P34741 201 aa11.16□□□□□ -0.62
TRIM39-204ENST00000396548 ZMAT1Q5H9K5 638 aa11.16□□□□□ -0.62
TRIM39-204ENST00000396548 FAM27D1Q5T7N8 215 aa11.16□□□□□ -0.62
TRIM39-204ENST00000396548 LINC00299Q6ZSB3 139 aa11.16□□□□□ -0.62
TRIM39-204ENST00000396548 OR5AK2Q8NH90 309 aa11.16□□□□□ -0.62
TRIM39-204ENST00000396548 TRIB1Q96RU8 372 aa11.16□□□□□ -0.62
TRIM39-204ENST00000396548 PRORYQ9H606 182 aa11.16□□□□□ -0.62
TRIM39-204ENST00000396548 MALT1Q9UDY8 824 aa11.16□□□□□ -0.62
TRIM39-204ENST00000396548 PTPRQQ9UMZ3 2332 aa11.16□□□□□ -0.62
TRIM39-204ENST00000396548 TMEM212A6NML5 194 aa11.16□□□□□ -0.62
TRIM39-204ENST00000396548 GATBO75879 557 aaKnown RBP11.16□□□□□ -0.62
TRIM39-204ENST00000396548 ISG15P05161 165 aa11.16□□□□□ -0.62
TRIM39-204ENST00000396548 OR3A2P47893 321 aa11.16□□□□□ -0.62
TRIM39-204ENST00000396548 OR2AJ1Q8NGZ0 328 aa11.16□□□□□ -0.62
TRIM39-204ENST00000396548 FGFBP3Q8TAT2 258 aa11.16□□□□□ -0.62
TRIM39-204ENST00000396548 APH1AQ96BI3 265 aa11.16□□□□□ -0.62
TRIM39-204ENST00000396548 SH3GL3Q99963 347 aa11.16□□□□□ -0.62
TRIM39-204ENST00000396548 ZNF71Q9NQZ8 489 aaPredicted RBP11.16□□□□□ -0.62
TRIM39-204ENST00000396548 GALNT8Q9NY28 637 aa11.16□□□□□ -0.62
TRIM39-204ENST00000396548 PLEKHB1Q9UF11 243 aaPredicted RBP11.16□□□□□ -0.62
TRIM39-204ENST00000396548 GSTK1Q9Y2Q3 226 aa11.16□□□□□ -0.62
TRIM39-204ENST00000396548 ITPR1Q14643 2758 aa11.16□□□□□ -0.62
TRIM39-204ENST00000396548 ACACAQ13085 2346 aa11.15□□□□□ -0.62
TRIM39-204ENST00000396548 DOCK7Q96N67 2140 aa11.15□□□□□ -0.62
TRIM39-204ENST00000396548 CDRT1O95170 752 aa11.15□□□□□ -0.62
TRIM39-204ENST00000396548 SERPINA3P01011 423 aa11.15□□□□□ -0.62
TRIM39-204ENST00000396548 MMP7P09237 267 aaPredicted RBP11.15□□□□□ -0.62
TRIM39-204ENST00000396548 MTNR1BP49286 362 aa11.15□□□□□ -0.62
TRIM39-204ENST00000396548 CEACAM19Q7Z692 300 aa11.15□□□□□ -0.62
TRIM39-204ENST00000396548 SYT9Q86SS6 491 aa11.15□□□□□ -0.62
TRIM39-204ENST00000396548 LRRC18Q8N456 261 aa11.15□□□□□ -0.62
TRIM39-204ENST00000396548 GJC3Q8NFK1 279 aa11.15□□□□□ -0.62
TRIM39-204ENST00000396548 SLX1AQ9BQ83 275 aa11.15□□□□□ -0.62
TRIM39-204ENST00000396548 KCNN2Q9H2S1 579 aa11.15□□□□□ -0.62
TRIM39-204ENST00000396548 PRSS50Q9UI38 385 aa11.15□□□□□ -0.62
TRIM39-204ENST00000396548 SLC22A13Q9Y226 551 aa11.15□□□□□ -0.62
TRIM39-204ENST00000396548 TRBV5-7A0A0A0MS05 114 aa11.15□□□□□ -0.62
TRIM39-204ENST00000396548 MBD3L4A6NDZ8 208 aaPredicted RBP11.15□□□□□ -0.62
TRIM39-204ENST00000396548 MBD3L3A6NE82 208 aaPredicted RBP11.15□□□□□ -0.62
TRIM39-204ENST00000396548 MBD3L5A6NJ08 208 aaPredicted RBP11.15□□□□□ -0.62
TRIM39-204ENST00000396548 IGHV3-9P01782 118 aa11.15□□□□□ -0.62
TRIM39-204ENST00000396548 H2BFMP0C1H6 154 aa11.15□□□□□ -0.62
TRIM39-204ENST00000396548 CEP78Q5JTW2 689 aa11.15□□□□□ -0.62
TRIM39-204ENST00000396548 SKA3Q8IX90 412 aa11.15□□□□□ -0.62
TRIM39-204ENST00000396548 OR10AC1Q8NH08 325 aa11.15□□□□□ -0.62
TRIM39-204ENST00000396548 MBD3L2Q8NHZ7 208 aaPredicted RBP11.15□□□□□ -0.62
TRIM39-204ENST00000396548 PHYHIPQ92561 330 aa11.15□□□□□ -0.62
TRIM39-204ENST00000396548 DERL3Q96Q80 235 aa11.15□□□□□ -0.62
TRIM39-204ENST00000396548 OR14A2Q96R54 314 aa11.15□□□□□ -0.62
TRIM39-204ENST00000396548 FAM215AQ9Y5M1 114 aa11.15□□□□□ -0.62
TRIM39-204ENST00000396548 FREM1Q5H8C1 2179 aa11.14□□□□□ -0.63
TRIM39-204ENST00000396548 ARPC4-TTLL3A0A0A6YYG9 625 aa11.14□□□□□ -0.63
TRIM39-204ENST00000396548 TRAV1-2A0A0B4J238 106 aa11.14□□□□□ -0.63
TRIM39-204ENST00000396548 A0A0G2JK05 382 aa11.14□□□□□ -0.63
TRIM39-204ENST00000396548 MED19A0JLT2 244 aaPredicted RBP11.14□□□□□ -0.63
TRIM39-204ENST00000396548 ZNF879B4DU55 563 aa11.14□□□□□ -0.63
TRIM39-204ENST00000396548 SYNGR3O43761 229 aa11.14□□□□□ -0.63
TRIM39-204ENST00000396548 B4GALT1P15291 398 aa11.14□□□□□ -0.63
TRIM39-204ENST00000396548 MAGEB1P43366 347 aa11.14□□□□□ -0.63
TRIM39-204ENST00000396548 KIR2DL2P43627 348 aaPredicted RBP11.14□□□□□ -0.63
TRIM39-204ENST00000396548 OR51A4Q8NGJ6 313 aa11.14□□□□□ -0.63
TRIM39-204ENST00000396548 WACQ9BTA9 647 aa11.14□□□□□ -0.63
TRIM39-204ENST00000396548 ZCCHC4Q9H5U6 513 aa11.14□□□□□ -0.63
TRIM39-204ENST00000396548 EMC9Q9Y3B6 208 aa11.14□□□□□ -0.63
TRIM39-204ENST00000396548 IGF2RP11717 2491 aa11.14□□□□□ -0.63
TRIM39-204ENST00000396548 CRYGSP22914 178 aa11.14□□□□□ -0.63
TRIM39-204ENST00000396548 SH3BGRP55822 239 aaPredicted RBP11.14□□□□□ -0.63
TRIM39-204ENST00000396548 FAM180AQ6UWF9 173 aa11.14□□□□□ -0.63
TRIM39-204ENST00000396548 TFAP2EQ6VUC0 442 aa11.14□□□□□ -0.63
TRIM39-204ENST00000396548 MCEMP1Q8IX19 187 aa11.14□□□□□ -0.63
TRIM39-204ENST00000396548 RDH10Q8IZV5 341 aa11.14□□□□□ -0.63
TRIM39-204ENST00000396548 KDF1Q8NAX2 398 aaPredicted RBP11.14□□□□□ -0.63
TRIM39-204ENST00000396548 OR6Q1Q8NGQ2 317 aa11.14□□□□□ -0.63
TRIM39-204ENST00000396548 ZCCHC14Q8WYQ9 949 aaKnown RBP11.14□□□□□ -0.63
TRIM39-204ENST00000396548 OR52A1Q9UKL2 312 aa11.14□□□□□ -0.63
TRIM39-204ENST00000396548 NBEAQ8NFP9 2946 aa11.14□□□□□ -0.63
TRIM39-204ENST00000396548 DSPP15924 2871 aaKnown RBP11.14□□□□□ -0.63
TRIM39-204ENST00000396548 A0A075B6Q4 140 aa11.14□□□□□ -0.63
TRIM39-204ENST00000396548 OR6C6A6NF89 314 aa11.14□□□□□ -0.63
TRIM39-204ENST00000396548 TOXO94900 526 aa11.14□□□□□ -0.63
TRIM39-204ENST00000396548 IL18BPO95998 194 aa11.14□□□□□ -0.63
TRIM39-204ENST00000396548 IGLV3-1P01715 115 aa11.14□□□□□ -0.63
TRIM39-204ENST00000396548 ITGA5P08648 1049 aa11.14□□□□□ -0.63
TRIM39-204ENST00000396548 PSMA6P60900 246 aaKnown RBP11.14□□□□□ -0.63
TRIM39-204ENST00000396548 ARF1P84077 181 aaKnown RBP11.14□□□□□ -0.63
TRIM39-204ENST00000396548 ZNF404Q494X3 552 aa11.14□□□□□ -0.63
TRIM39-204ENST00000396548 FBXW9Q5XUX1 488 aa11.14□□□□□ -0.63
TRIM39-204ENST00000396548 ASPHD2Q6ICH7 369 aa11.14□□□□□ -0.63
TRIM39-204ENST00000396548 FAM214BQ7L5A3 538 aa11.14□□□□□ -0.63
TRIM39-204ENST00000396548 BOD1Q96IK1 185 aa11.14□□□□□ -0.63
TRIM39-204ENST00000396548 MMP27Q9H306 513 aa11.14□□□□□ -0.63
TRIM39-204ENST00000396548 NIPAL2Q9H841 368 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms