RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 STT3BQ8TCJ2 826 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 PTDSS2Q9BVG9 487 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 SARGQ9BW04 601 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 DNAJB12Q9NXW2 375 aaKnown RBP7.81□□□□□ -1.16
GABRA1-202ENST00000393943 NUMA1Q14980 2115 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 OTOFQ9HC10 1997 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 TMEM272A0A1B0GTI8 110 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 ZNF587BE7ETH6 402 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 AP4M1O00189 453 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 GPR31O00270 319 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 FGF17O60258 216 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 ITGB2P05107 769 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 RPL18Q07020 188 aaKnown RBP7.81□□□□□ -1.16
GABRA1-202ENST00000393943 ZNF74Q16587 644 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 DHRS7BQ6IAN0 325 aaPredicted RBP7.81□□□□□ -1.16
GABRA1-202ENST00000393943 SEZ6L2Q6UXD5 910 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 ABHD12BQ7Z5M8 362 aaPredicted RBP7.81□□□□□ -1.16
GABRA1-202ENST00000393943 OR5L2Q8NGL0 311 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 GLYATL2Q8WU03 294 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 SPTSSAQ969W0 71 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 PIK3IP1Q96FE7 263 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 MS4A7Q9GZW8 240 aaPredicted RBP7.81□□□□□ -1.16
GABRA1-202ENST00000393943 TXNIPQ9H3M7 391 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 ZCCHC4Q9H5U6 513 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 SPACA1Q9HBV2 294 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 HCFC1R1Q9NWW0 138 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 KLRF1Q9NZS2 232 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 CTSFQ9UBX1 484 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 C19orf25Q9UFG5 118 aaPredicted RBP7.81□□□□□ -1.16
GABRA1-202ENST00000393943 PCDHGA5Q9Y5G8 931 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 A0A0G2JK05 382 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 PRSS37A4D1T9 235 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 UTS2O95399 124 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 SFT2D2O95562 160 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 GNRHRP30968 328 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 ZNF136P52737 540 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 ATP1B3P54709 279 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 ZP1P60852 638 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 RPL23AP62750 156 aaKnown RBP7.81□□□□□ -1.16
GABRA1-202ENST00000393943 SGCBQ16585 318 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 CORO6Q6QEF8 472 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 ZNF695Q8IW36 515 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 CMTM1Q8IZ96 169 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 MRPL43Q8N983 215 aaKnown RBP7.81□□□□□ -1.16
GABRA1-202ENST00000393943 FAM174AQ8TBP5 190 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 NMNAT2Q9BZQ4 307 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 TINAGL1Q9GZM7 467 aaPredicted RBP7.81□□□□□ -1.16
GABRA1-202ENST00000393943 SLC23A2Q9UGH3 650 aa7.81□□□□□ -1.16
GABRA1-202ENST00000393943 YBX2Q9Y2T7 364 aaKnown RBP7.81□□□□□ -1.16
GABRA1-202ENST00000393943 OR6C68A6NDL8 312 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 RAB27BO00194 218 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 ST8SIA3O43173 380 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 MBTPS2O43462 519 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 DFFBO76075 338 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 IGHG1P01857 330 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 PMP2P02689 132 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 MPGP29372 298 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 GDI1P31150 447 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 FCGR2CP31995 323 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 MECP2P51608 486 aaKnown RBP7.8□□□□□ -1.16
GABRA1-202ENST00000393943 SNRPEP62304 92 aaKnown RBP7.8□□□□□ -1.16
GABRA1-202ENST00000393943 ATPAF1Q5TC12 328 aaPredicted RBP7.8□□□□□ -1.16
GABRA1-202ENST00000393943 Q7L0L9 218 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 ZNF547Q8IVP9 402 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 PLPP5Q8NEB5 264 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 DOK4Q8TEW6 326 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 ZG16BQ96DA0 208 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 TOE1Q96GM8 510 aaKnown RBP7.8□□□□□ -1.16
GABRA1-202ENST00000393943 TCTN2Q96GX1 697 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 FN3KRPQ9HA64 309 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 ZNF286AQ9HBT8 521 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 PARP11Q9NR21 331 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 RNF150Q9ULK6 438 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 PUS1Q9Y606 427 aaKnown RBP eCLIP7.8□□□□□ -1.16
GABRA1-202ENST00000393943 WDR90Q96KV7 1748 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 TRAV20A0A0B4J274 112 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 TRBV5-5A0A0J9YX44 114 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 FITM1A5D6W6 292 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 HRH1P35367 487 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 KCNJ3P48549 501 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 HHEXQ03014 270 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 GPR157Q5UAW9 335 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 GRINAQ7Z429 371 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 CDC20BQ86Y33 519 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 OR13C9Q8NGT0 318 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 ZNF681Q96N22 645 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 NAA11Q9BSU3 229 aaPredicted RBP7.8□□□□□ -1.16
GABRA1-202ENST00000393943 ULBP3Q9BZM4 244 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 TCEAL2Q9H3H9 227 aaPredicted RBP7.8□□□□□ -1.16
GABRA1-202ENST00000393943 CGGBP1Q9UFW8 167 aaPredicted RBP7.8□□□□□ -1.16
GABRA1-202ENST00000393943 CES1P1Q9UKY3 287 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 SLC17A4Q9Y2C5 497 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 CARHSP1Q9Y2V2 147 aaKnown RBP7.8□□□□□ -1.16
GABRA1-202ENST00000393943 FNDC1Q4ZHG4 1894 aaPredicted RBP7.8□□□□□ -1.16
GABRA1-202ENST00000393943 ELOA3CA0A087WX78 387 aaPredicted RBP7.8□□□□□ -1.16
GABRA1-202ENST00000393943 HCRTR1O43613 425 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 CEBPBP17676 345 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 ABCD3P28288 659 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 DUSP1P28562 367 aa7.8□□□□□ -1.16
GABRA1-202ENST00000393943 SFTPDP35247 375 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms