RNA–Protein interactions for RNA: ENST00000381835.9

CIITA-202, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 1 (best) BASIC

Gene CIITA, Length 2,344 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-202ENST00000381835 A0A0J9YW62 118 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 EIF1AYO14602 144 aaKnown RBP11.07□□□□□ -0.64
CIITA-202ENST00000381835 SC5DO75845 299 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 HPNP05981 417 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 GYPBP06028 91 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 SBK2P0C263 348 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 SULT1A3P0DMM9 295 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 SULT1A4P0DMN0 295 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 POU3F2P20265 443 aaPredicted RBP11.07□□□□□ -0.64
CIITA-202ENST00000381835 ENPP1P22413 925 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 PYCR1P32322 319 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 GFRA1P56159 465 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 ZNF85Q03923 595 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 EXOSC2Q13868 293 aaKnown RBP11.07□□□□□ -0.64
CIITA-202ENST00000381835 ACKR1Q16570 336 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 GPR139Q6DWJ6 353 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 LEG1Q6P5S2 330 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 LRRC69Q6ZNQ3 347 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 BTN2A1Q7KYR7 527 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 GPAT4Q86UL3 456 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 COMMD7Q86VX2 200 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 JAZF1Q86VZ6 243 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 ZADH2Q8N4Q0 377 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.07□□□□□ -0.64
CIITA-202ENST00000381835 ZPLD1Q8TCW7 415 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 PGLYRP3Q96LB9 341 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 KLHL15Q96M94 604 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 BEX1Q9HBH7 125 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 DLL4Q9NR61 685 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 UBQLN2Q9UHD9 624 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 PIEZO2Q9H5I5 2752 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 A0A0B4J203 849 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 CIB4A0PJX0 185 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 GJE1A6NN92 205 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 ZNF814B7Z6K7 855 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 H7C1C5 153 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 K7ENP7 123 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 ACOT7O00154 380 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 PMS2P2O95744 297 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 APEHP13798 732 aaKnown RBP11.07□□□□□ -0.64
CIITA-202ENST00000381835 FOSL1P15407 271 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 KLK2P20151 261 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 PRKACBP22694 351 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 CDKN2AP42771 156 aaKnown RBP11.07□□□□□ -0.64
CIITA-202ENST00000381835 RAG2P55895 527 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 LCN6P62502 163 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 SLC35A1P78382 337 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 POU3F1Q03052 451 aaPredicted RBP11.07□□□□□ -0.64
CIITA-202ENST00000381835 IKZF1Q13422 519 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 MELKQ14680 651 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 TMEM225Q6GV28 225 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 MTFR2Q6P444 385 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 INO80CQ6PI98 192 aaPredicted RBP11.07□□□□□ -0.64
CIITA-202ENST00000381835 ESPNLQ6ZVH7 1005 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 MS4A15Q8N5U1 240 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 NPEPL1Q8NDH3 523 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 PCNPQ8WW12 178 aaKnown RBP11.07□□□□□ -0.64
CIITA-202ENST00000381835 C7orf50Q9BRJ6 194 aaKnown RBP11.07□□□□□ -0.64
CIITA-202ENST00000381835 ACTR6Q9GZN1 396 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 ADGRL4Q9HBW9 690 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 ABRACLQ9P1F3 81 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 SCP2D1Q9UJQ7 156 aa11.07□□□□□ -0.64
CIITA-202ENST00000381835 CACNA1AO00555 2505 aa11.06□□□□□ -0.64
CIITA-202ENST00000381835 IGHV3-15A0A0B4J1V0 119 aa11.06□□□□□ -0.64
CIITA-202ENST00000381835 OR6C68A6NDL8 312 aa11.06□□□□□ -0.64
CIITA-202ENST00000381835 SERPINA3P01011 423 aa11.06□□□□□ -0.64
CIITA-202ENST00000381835 ZNF250P15622 560 aa11.06□□□□□ -0.64
CIITA-202ENST00000381835 ATF1P18846 271 aa11.06□□□□□ -0.64
CIITA-202ENST00000381835 PLA2G5P39877 138 aa11.06□□□□□ -0.64
CIITA-202ENST00000381835 SUCLG1P53597 346 aaKnown RBP11.06□□□□□ -0.64
CIITA-202ENST00000381835 RAB14P61106 215 aa11.06□□□□□ -0.64
CIITA-202ENST00000381835 SLC10A1Q14973 349 aa11.06□□□□□ -0.64
CIITA-202ENST00000381835 GRK1Q15835 563 aa11.06□□□□□ -0.64
CIITA-202ENST00000381835 HYAL4Q2M3T9 481 aa11.06□□□□□ -0.64
CIITA-202ENST00000381835 MESTQ5EB52 335 aa11.06□□□□□ -0.64
CIITA-202ENST00000381835 CLLU1Q5K131 121 aa11.06□□□□□ -0.64
CIITA-202ENST00000381835 RNFT1Q5M7Z0 435 aa11.06□□□□□ -0.64
CIITA-202ENST00000381835 DMKNQ6E0U4 476 aaPredicted RBP11.06□□□□□ -0.64
CIITA-202ENST00000381835 PRSS45Q7RTY3 260 aa11.06□□□□□ -0.64
CIITA-202ENST00000381835 FGD2Q7Z6J4 655 aa11.06□□□□□ -0.64
CIITA-202ENST00000381835 SYT9Q86SS6 491 aa11.06□□□□□ -0.64
CIITA-202ENST00000381835 TEX19Q8NA77 164 aa11.06□□□□□ -0.64
CIITA-202ENST00000381835 OR51L1Q8NGJ5 315 aa11.06□□□□□ -0.64
CIITA-202ENST00000381835 OR56B4Q8NH76 319 aa11.06□□□□□ -0.64
CIITA-202ENST00000381835 TTTY10Q9BZA0 68 aa11.06□□□□□ -0.64
CIITA-202ENST00000381835 DEFB127Q9H1M4 99 aa11.06□□□□□ -0.64
CIITA-202ENST00000381835 TXNIPQ9H3M7 391 aa11.06□□□□□ -0.64
CIITA-202ENST00000381835 NKIRAS2Q9NYR9 191 aa11.06□□□□□ -0.64
CIITA-202ENST00000381835 CAMK2AQ9UQM7 478 aa11.06□□□□□ -0.64
CIITA-202ENST00000381835 TRAV1-2A0A0B4J238 106 aa11.06□□□□□ -0.64
CIITA-202ENST00000381835 ZNF593O00488 134 aaPredicted RBP11.06□□□□□ -0.64
CIITA-202ENST00000381835 RAMP1O60894 148 aa11.06□□□□□ -0.64
CIITA-202ENST00000381835 MPC2O95563 127 aa11.06□□□□□ -0.64
CIITA-202ENST00000381835 ITGB2P05107 769 aa11.06□□□□□ -0.64
CIITA-202ENST00000381835 EPXP11678 715 aa11.06□□□□□ -0.64
CIITA-202ENST00000381835 IFNGR1P15260 489 aa11.06□□□□□ -0.64
CIITA-202ENST00000381835 RPL27P61353 136 aaKnown RBP11.06□□□□□ -0.64
CIITA-202ENST00000381835 CSNK2A1P68400 391 aaPredicted RBP11.06□□□□□ -0.64
CIITA-202ENST00000381835 ZP4Q12836 540 aa11.06□□□□□ -0.64
CIITA-202ENST00000381835 EMC4Q5J8M3 183 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms