RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 SKP1P63208 163 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 HYAL1Q12794 435 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 GAMTQ14353 236 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 SURF2Q15527 256 aaPredicted RBP11.83□□□□□ -0.52
NUP54-201ENST00000264883 ISXQ2M1V0 245 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 CLEC9AQ6UXN8 241 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 PPP1R3BQ86XI6 285 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 OR5T3Q8NGG3 340 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 ZNRF4Q8WWF5 429 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 ASB17Q8WXJ9 295 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 RBM18Q96H35 190 aaKnown RBP11.83□□□□□ -0.52
NUP54-201ENST00000264883 SLC6A7Q99884 636 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 SYT4Q9H2B2 425 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 PRO1933Q9H354 126 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 GDE1Q9NZC3 331 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 TBC1D3DA0A087WVF3 549 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 TBC1D3IA0A087WXS9 549 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 TBC1D3LB9A6J9 549 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 SLC2A1P11166 492 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 ZNF28P17035 718 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 FCARP24071 287 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 ELOCQ15369 112 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 GAB4Q2WGN9 574 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 ACTBL2Q562R1 376 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 TBC1D3CQ6IPX1 549 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 EIF5AL1Q6IS14 154 aaKnown RBP11.83□□□□□ -0.52
NUP54-201ENST00000264883 DPPA2Q7Z7J5 298 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 TBC1D3Q8IZP1 549 aaPredicted RBP11.83□□□□□ -0.52
NUP54-201ENST00000264883 COX18Q8N8Q8 333 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 MAFIPQ8WZ33 124 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 RNF166Q96A37 237 aaPredicted RBP11.83□□□□□ -0.52
NUP54-201ENST00000264883 MACROD1Q9BQ69 325 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 SOX7Q9BT81 388 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 TRIM2Q9C040 744 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 KIR3DX1Q9H7L2 352 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 CHRNA9Q9UGM1 479 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 KCNE5Q9UJ90 142 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 MRPS33Q9Y291 106 aaKnown RBP11.83□□□□□ -0.52
NUP54-201ENST00000264883 TRBV5-5A0A0J9YX44 114 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 CENPVL1A0A0U1RR11 272 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 A0A1W2PPE2 198 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 PRRT4C9JH25 899 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 DCTN6O00399 190 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 LINC01565O15544 149 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 NDUFB2O95178 105 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 PMP2P02689 132 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 STATHP02808 62 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 CPMP14384 443 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 VAMP1P23763 118 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 AK4P27144 223 aaPredicted RBP11.82□□□□□ -0.52
NUP54-201ENST00000264883 SERPINF1P36955 418 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 NUBP1P53384 320 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 C2orf76Q3KRA6 126 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 TCEAL5Q5H9L2 206 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 FHL5Q5TD97 284 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 CYB5R2Q6BCY4 276 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 OR6K6Q8NGW6 343 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 ZNF417Q8TAU3 575 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 CCDC74AQ96AQ1 378 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 TGM7Q96PF1 710 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 CDC6Q99741 560 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 IGFLR1Q9H665 355 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 OBP2AQ9NY56 170 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 DEC1Q9P2X7 70 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 TP53TG5Q9Y2B4 290 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 NUMA1Q14980 2115 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 A0A1B0GVT2 93 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 MSGN1A6NI15 193 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 PRR32B1ATL7 298 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 ITGA5P08648 1049 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 SLC35G6P0C7Q6 338 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 ID4P47928 161 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 BIKQ13323 160 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 ERV3-1Q14264 604 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 KCNAB1Q14722 419 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 TCEAL6Q6IPX3 200 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 TMPPEQ6ZT21 453 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 ZNF627Q7L945 461 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 FAM220AQ7Z4H9 259 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 ARL6IP6Q8N6S5 226 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 SUSD6Q92537 303 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 COL26A1Q96A83 441 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 NMES1Q9C002 83 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 C6orf106Q9H6K1 298 aaPredicted RBP11.82□□□□□ -0.52
NUP54-201ENST00000264883 LMAN1LQ9HAT1 526 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 SPACA1Q9HBV2 294 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 PARP11Q9NR21 331 aa11.82□□□□□ -0.52
NUP54-201ENST00000264883 GDF2Q9UK05 429 aaPredicted RBP11.82□□□□□ -0.52
NUP54-201ENST00000264883 SZT2Q5T011 3432 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 IGLON5A6NGN9 336 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 PRR19A6NJB7 356 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 PRAMEF26H0Y7S4 382 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 H0YIZ8 118 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 H3BSH0 61 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 CLDN4O14493 209 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 B3GALT2O43825 422 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 BRINP1O60477 761 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 PLGP00747 810 aaPredicted RBP11.81□□□□□ -0.52
NUP54-201ENST00000264883 TACSTD2P09758 323 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 OR8U9P0C7N5 309 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms