RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Vmn1r212Q8R268 357 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 Olfr1393Q8VFA7 311 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 Osbpl3Q9DBS9 855 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 Keg1Q9DCY0 295 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 Sectm1bQ9JL59 212 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 Olfr1493-ps1A0A140LHU2 316 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 Bbip1J3QMK2 67 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 Vmn2r51L7N215 852 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 Zfand5O88878 213 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 Tcea1P10711 301 aaKnown RBP14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 Gpd1P13707 349 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 Cldn18P56857 264 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 HfeP70387 359 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 Mfsd2bQ3T9M1 494 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 Slc35a1Q61420 336 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 EdnraQ61614 427 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 Trim45Q6PFY8 580 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 Olfr1101Q7TR59 310 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 Olfr776Q7TRI3 312 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 CblcQ80XL1 496 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 Olfr214Q8VG27 320 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 Vkorc1Q9CRC0 161 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 Trim39Q9ESN2 488 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 Gab1Q9QYY0 695 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 Wdfy4E9Q2M9 3149 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 Olfr239A0PK55 315 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 Gm42421F6X8D5 166 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 Olfr55K7N6Q1 315 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 Vmn2r28L7N203 852 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 Cdh3P10287 822 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 SnrpbP27048 231 aaKnown RBP14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 Ube2fbQ3UWQ3 185 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 Vmn1r196Q5SVD5 301 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 Rps27Q6ZWU9 84 aaKnown RBP14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 Ocel1Q8VCR9 219 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 Olfr378Q8VGT2 314 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 WacQ924H7 646 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 Gdpd1Q9CRY7 314 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 Coq5Q9CXI0 327 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 Gabra4Q9D6F4 552 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 Lime1Q9EQR5 269 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 Chrm3Q9ERZ3 589 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 Mmp17Q9R0S3 578 aa14.28□□□□□ -0.12
Trim39-203ENSMUST00000113706 Olfr576A0A0G2JFH3 312 aa14.27□□□□□ -0.12
Trim39-203ENSMUST00000113706 Zfp345A2AQA1 561 aa14.27□□□□□ -0.12
Trim39-203ENSMUST00000113706 Olfr1224-ps1A3KGY4 311 aa14.27□□□□□ -0.12
Trim39-203ENSMUST00000113706 Trabd2bB1ATG9 517 aa14.27□□□□□ -0.12
Trim39-203ENSMUST00000113706 Fbxw28E9Q8A4 466 aa14.27□□□□□ -0.12
Trim39-203ENSMUST00000113706 Olfr172E9Q8F6 309 aa14.27□□□□□ -0.12
Trim39-203ENSMUST00000113706 Tmem178bM0QWJ9 172 aa14.27□□□□□ -0.12
Trim39-203ENSMUST00000113706 Rgs5O08850 181 aa14.27□□□□□ -0.12
Trim39-203ENSMUST00000113706 OtpO09113 325 aa14.27□□□□□ -0.12
Trim39-203ENSMUST00000113706 Rad51dO55230 329 aa14.27□□□□□ -0.12
Trim39-203ENSMUST00000113706 P2rx1P51576 399 aa14.27□□□□□ -0.12
Trim39-203ENSMUST00000113706 Slc35f3Q1LZI2 421 aa14.27□□□□□ -0.12
Trim39-203ENSMUST00000113706 CiartQ3TQ03 375 aa14.27□□□□□ -0.12
Trim39-203ENSMUST00000113706 Ccdc177Q3UHB8 706 aa14.27□□□□□ -0.12
Trim39-203ENSMUST00000113706 Tspan7Q62283 249 aa14.27□□□□□ -0.12
Trim39-203ENSMUST00000113706 Zfp157Q6PCM4 567 aa14.27□□□□□ -0.12
Trim39-203ENSMUST00000113706 Wdr48Q8BH57 676 aa14.27□□□□□ -0.12
Trim39-203ENSMUST00000113706 Cacnb4Q8R0S4 519 aa14.27□□□□□ -0.12
Trim39-203ENSMUST00000113706 Slco1a6Q99J94 670 aa14.27□□□□□ -0.12
Trim39-203ENSMUST00000113706 Dppa5aQ9CQS7 118 aa14.27□□□□□ -0.12
Trim39-203ENSMUST00000113706 Copz2Q9JHH9 205 aa14.27□□□□□ -0.12
Trim39-203ENSMUST00000113706 Serinc3Q9QZI9 472 aa14.27□□□□□ -0.12
Trim39-203ENSMUST00000113706 Slc7a11Q9WTR6 502 aa14.27□□□□□ -0.12
Trim39-203ENSMUST00000113706 Trav12n-2A0A075B626 113 aa14.27□□□□□ -0.13
Trim39-203ENSMUST00000113706 H2al1oL7MU04 110 aa14.27□□□□□ -0.13
Trim39-203ENSMUST00000113706 GzmmO08643 264 aa14.27□□□□□ -0.13
Trim39-203ENSMUST00000113706 PrkcaP20444 672 aa14.27□□□□□ -0.13
Trim39-203ENSMUST00000113706 Rpl27P61358 136 aaKnown RBP14.27□□□□□ -0.13
Trim39-203ENSMUST00000113706 S100a15aQ6S5I3 108 aa14.27□□□□□ -0.13
Trim39-203ENSMUST00000113706 Slc34a3Q80SU6 601 aa14.27□□□□□ -0.13
Trim39-203ENSMUST00000113706 Slc1a7Q8JZR4 559 aa14.27□□□□□ -0.13
Trim39-203ENSMUST00000113706 Olfr516Q8VFZ5 314 aa14.27□□□□□ -0.13
Trim39-203ENSMUST00000113706 CytipQ91VY6 359 aa14.27□□□□□ -0.13
Trim39-203ENSMUST00000113706 Mmp1aQ9EPL5 464 aa14.27□□□□□ -0.13
Trim39-203ENSMUST00000113706 Plxnb1Q8CJH3 2119 aa14.27□□□□□ -0.13
Trim39-203ENSMUST00000113706 Cep295Q8BQ48 2412 aa14.27□□□□□ -0.13
Trim39-203ENSMUST00000113706 Ighv1-54A0A075B5W5 117 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Mn1D3YWE6 1297 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Vmn2r36K7N741 852 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Cdk2ap1O35207 114 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 PpibP24369 216 aaKnown RBP14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Hoxd1Q01822 328 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Slc25a33Q3TZX3 320 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Bahd1Q497V6 772 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Epha6Q62413 1035 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Dcaf12Q8BGZ3 453 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Hpf1Q8CFE2 346 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Vmn1r23Q8R2D0 302 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Olfr98Q8VFD9 309 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Kiaa2013Q91X21 634 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Q9CRW3 126 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 EcdQ9CS74 641 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Gstz1Q9WVL0 216 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Trbc1A0A0A6YWV4 173 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Gm11361A0A1Y7VKY1 152 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Pramef6A2A8M8 474 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Ggta1l1A2AUQ7 319 aa14.26□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 338.1 ms