RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 FBXW2Q9UKT8 454 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 GOLT1BQ9Y3E0 138 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 IFT140Q96RY7 1462 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 MRC2Q9UBG0 1479 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 MGAT4DA6NG13 374 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 FBLL1A6NHQ2 334 aaKnown RBP2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 ARHGAP42A6NI28 874 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 USP27XA6NNY8 438 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 A8MUA0 341 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 EVPLLA8MZ36 301 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 HACD1B0YJ81 288 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 C11orf98E9PRG8 122 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 PRMT5O14744 637 aaPredicted RBP2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 SH2D1BO14796 132 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 BCKDKO14874 412 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 UGT1A9O60656 530 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 STX11O75558 287 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 DCTN3O75935 186 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 CYB5R3P00387 301 aaPredicted RBP2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 PPBPP02775 128 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 UGT2B4P06133 528 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 CHRNGP07510 517 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 SMIM6P0DI80 62 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 RD3LP0DJH9 198 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 COX4I1P13073 169 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 IFI30P13284 250 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 MUC1P15941 1255 aaPredicted RBP2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 GZMHP20718 246 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 PCMT1P22061 227 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 PSMB5P28074 263 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 GTF2E2P29084 291 aaKnown RBP2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 CCR7P32248 378 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 FOXN2P32314 431 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 CEACAM6P40199 344 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 CSKP41240 450 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 MAP2K4P45985 399 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 AKR1D1P51857 326 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 KPNA2P52292 529 aaKnown RBP2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 SNU13P55769 128 aaKnown RBP2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 RGS8P57771 180 aaPredicted RBP2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 MLF1P58340 268 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 PFN3P60673 137 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 ST8SIA6P61647 398 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 RAB11AP62491 216 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 ESRRGP62508 458 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 HERV-K104P63124 156 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 ERVK-25P63136 954 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 DEFA6Q01524 100 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 TFDP2Q14188 446 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 GPNMBQ14956 572 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 CDK10Q15131 360 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 TAF1AQ15573 450 aaPredicted RBP2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 SLC9A3R2Q15599 337 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 ATP6AP1Q15904 470 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 RAB11BQ15907 218 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 TMEM249Q2WGJ8 235 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 NDUFAF6Q330K2 333 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 ACSBG2Q5FVE4 666 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 RESP18Q5W5W9 173 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 CYHR1Q6ZMK1 362 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 FAM92BQ6ZTR7 304 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 ZNF589Q86UQ0 364 aaPredicted RBP2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 THOC6Q86W42 341 aaKnown RBP2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 RAB43Q86YS6 212 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 BOD1L2Q8IYS8 172 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 ZFP82Q8N141 532 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 BATF2Q8N1L9 274 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 C17orf78Q8N4C9 275 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 OR7G3Q8NG95 312 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 OR13C9Q8NGT0 318 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 GRPEL2Q8TAA5 225 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 CXorf40AQ8TE69 158 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 FAM172AQ8WUF8 416 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 ASB9Q96DX5 294 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 BIRC8Q96P09 236 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 SERPINB11Q96P15 392 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 TSSK3Q96PN8 268 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 PANX3Q96QZ0 392 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 CHP1Q99653 195 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 HOPXQ9BPY8 73 aaPredicted RBP2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 NICN1Q9BSH3 213 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 ERVK-6Q9BXR3 956 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 GANQ9H2C0 597 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 SLC38A1Q9H2H9 487 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 PPA2Q9H2U2 334 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 GEMIN7Q9H840 131 aaKnown RBP2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 UGT1A7Q9HAW7 530 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 UGT1A10Q9HAW8 530 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 UGT1A8Q9HAW9 530 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 VAT1LQ9HCJ6 419 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 CTPS2Q9NRF8 586 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 TREM2Q9NZC2 230 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 SMPXQ9UHP9 88 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 CRLS1Q9UJA2 301 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 ANAPC7Q9UJX3 599 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 MGAT4BQ9UQ53 548 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 SNX24Q9Y343 169 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 PPIAL4AQ9Y536 164 aa2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 THOC2Q8NI27 1593 aaKnown RBP2.6□□□□□ -1.99
SMCHD1-202ENST00000577300 MSH6P52701 1360 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms