RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 FNDC8Q8TC99 324 aa15.33■□□□□ 0.04
CHD3-214ENST00000572579 NRIP3Q9NQ35 241 aa15.33■□□□□ 0.04
CHD3-214ENST00000572579 EGFL7Q9UHF1 273 aa15.33■□□□□ 0.04
CHD3-214ENST00000572579 STARD10Q9Y365 291 aa15.33■□□□□ 0.04
CHD3-214ENST00000572579 TRAV20A0A0B4J274 112 aa15.32■□□□□ 0.04
CHD3-214ENST00000572579 TEX13CA0A0J9YWL9 993 aa15.32■□□□□ 0.04
CHD3-214ENST00000572579 C12orf71A8MTZ7 269 aa15.32■□□□□ 0.04
CHD3-214ENST00000572579 TPD52L2O43399 206 aaKnown RBP15.32■□□□□ 0.04
CHD3-214ENST00000572579 CCDC22O60826 627 aa15.32■□□□□ 0.04
CHD3-214ENST00000572579 RGS9O75916 674 aaPredicted RBP15.32■□□□□ 0.04
CHD3-214ENST00000572579 NR2C1P13056 603 aa15.32■□□□□ 0.04
CHD3-214ENST00000572579 ZFP36P26651 326 aaKnown RBP15.32■□□□□ 0.04
CHD3-214ENST00000572579 IFNA8P32881 189 aa15.32■□□□□ 0.04
CHD3-214ENST00000572579 CDKN2AP42771 156 aaKnown RBP15.32■□□□□ 0.04
CHD3-214ENST00000572579 CDK5R2Q13319 367 aa15.32■□□□□ 0.04
CHD3-214ENST00000572579 HFEQ30201 348 aa15.32■□□□□ 0.04
CHD3-214ENST00000572579 CCDC92Q53HC0 331 aaPredicted RBP15.32■□□□□ 0.04
CHD3-214ENST00000572579 ALDH16A1Q8IZ83 802 aa15.32■□□□□ 0.04
CHD3-214ENST00000572579 FAM162AQ96A26 154 aa15.32■□□□□ 0.04
CHD3-214ENST00000572579 DHRS1Q96LJ7 313 aa15.32■□□□□ 0.04
CHD3-214ENST00000572579 KCTD14Q9BQ13 255 aaPredicted RBP15.32■□□□□ 0.04
CHD3-214ENST00000572579 DCAF13Q9NV06 445 aaKnown RBP15.32■□□□□ 0.04
CHD3-214ENST00000572579 VSX1Q9NZR4 365 aaPredicted RBP15.32■□□□□ 0.04
CHD3-214ENST00000572579 GRHPRQ9UBQ7 328 aa15.32■□□□□ 0.04
CHD3-214ENST00000572579 OPN4Q9UHM6 478 aa15.32■□□□□ 0.04
CHD3-214ENST00000572579 COA3Q9Y2R0 106 aaPredicted RBP15.32■□□□□ 0.04
CHD3-214ENST00000572579 GRIP1Q9Y3R0 1128 aa15.32■□□□□ 0.04
CHD3-214ENST00000572579 CLDN25C9JDP6 229 aa15.31■□□□□ 0.04
CHD3-214ENST00000572579 DCTN6O00399 190 aa15.31■□□□□ 0.04
CHD3-214ENST00000572579 SLC16A7O60669 478 aa15.31■□□□□ 0.04
CHD3-214ENST00000572579 H1F0P07305 194 aaKnown RBP15.31■□□□□ 0.04
CHD3-214ENST00000572579 CD55P08174 381 aa15.31■□□□□ 0.04
CHD3-214ENST00000572579 DBHP09172 617 aa15.31■□□□□ 0.04
CHD3-214ENST00000572579 COX5BP10606 129 aa15.31■□□□□ 0.04
CHD3-214ENST00000572579 PCMT1P22061 227 aa15.31■□□□□ 0.04
CHD3-214ENST00000572579 TEKQ02763 1124 aa15.31■□□□□ 0.04
CHD3-214ENST00000572579 RSPO1Q2MKA7 263 aaPredicted RBP15.31■□□□□ 0.04
CHD3-214ENST00000572579 GLYATQ6IB77 296 aa15.31■□□□□ 0.04
CHD3-214ENST00000572579 ELMOD3Q96FG2 381 aa15.31■□□□□ 0.04
CHD3-214ENST00000572579 TSSK2Q96PF2 358 aa15.31■□□□□ 0.04
CHD3-214ENST00000572579 GPX7Q96SL4 187 aaPredicted RBP15.31■□□□□ 0.04
CHD3-214ENST00000572579 ELAC2Q9BQ52 826 aaKnown RBP15.31■□□□□ 0.04
CHD3-214ENST00000572579 SYT4Q9H2B2 425 aa15.31■□□□□ 0.04
CHD3-214ENST00000572579 ANKRD19PQ9H560 264 aa15.31■□□□□ 0.04
CHD3-214ENST00000572579 OCEL1Q9H607 264 aa15.31■□□□□ 0.04
CHD3-214ENST00000572579 TBCCD1Q9NVR7 557 aa15.31■□□□□ 0.04
CHD3-214ENST00000572579 IER3IP1Q9Y5U9 82 aa15.31■□□□□ 0.04
CHD3-214ENST00000572579 ARHGAP32A7KAX9 2087 aa15.31■□□□□ 0.04
CHD3-214ENST00000572579 OR6C6A6NF89 314 aa15.3■□□□□ 0.04
CHD3-214ENST00000572579 RER1O15258 196 aa15.3■□□□□ 0.04
CHD3-214ENST00000572579 AHCYL1O43865 530 aa15.3■□□□□ 0.04
CHD3-214ENST00000572579 PNPP00491 289 aa15.3■□□□□ 0.04
CHD3-214ENST00000572579 MT-ND5P03915 603 aa15.3■□□□□ 0.04
CHD3-214ENST00000572579 SEMG1P04279 462 aa15.3■□□□□ 0.04
CHD3-214ENST00000572579 ADRA2CP18825 462 aa15.3■□□□□ 0.04
CHD3-214ENST00000572579 KRR1Q13601 381 aaKnown RBP15.3■□□□□ 0.04
CHD3-214ENST00000572579 MTX3Q5HYI7 312 aa15.3■□□□□ 0.04
CHD3-214ENST00000572579 ZER1Q7Z7L7 766 aa15.3■□□□□ 0.04
CHD3-214ENST00000572579 RNF148Q8N7C7 305 aa15.3■□□□□ 0.04
CHD3-214ENST00000572579 OR52J3Q8NH60 311 aa15.3■□□□□ 0.04
CHD3-214ENST00000572579 CMBLQ96DG6 245 aa15.3■□□□□ 0.04
CHD3-214ENST00000572579 ZNF570Q96NI8 536 aa15.3■□□□□ 0.04
CHD3-214ENST00000572579 NUAK2Q9H093 628 aa15.3■□□□□ 0.04
CHD3-214ENST00000572579 PURGQ9UJV8 347 aaKnown RBP15.3■□□□□ 0.04
CHD3-214ENST00000572579 PLSCR5A0PG75 271 aa15.29■□□□□ 0.04
CHD3-214ENST00000572579 H3BSA7 217 aa15.29■□□□□ 0.04
CHD3-214ENST00000572579 SGCEO43556 437 aa15.29■□□□□ 0.04
CHD3-214ENST00000572579 DOK2O60496 412 aa15.29■□□□□ 0.04
CHD3-214ENST00000572579 NDUFB2O95178 105 aa15.29■□□□□ 0.04
CHD3-214ENST00000572579 ABHD16AO95870 558 aa15.29■□□□□ 0.04
CHD3-214ENST00000572579 TXNDC12O95881 172 aa15.29■□□□□ 0.04
CHD3-214ENST00000572579 RHCEP18577 417 aa15.29■□□□□ 0.04
CHD3-214ENST00000572579 KITLGP21583 273 aa15.29■□□□□ 0.04
CHD3-214ENST00000572579 SDHAP31040 664 aa15.29■□□□□ 0.04
CHD3-214ENST00000572579 GUCA1AP43080 201 aaPredicted RBP15.29■□□□□ 0.04
CHD3-214ENST00000572579 HTR5AP47898 357 aa15.29■□□□□ 0.04
CHD3-214ENST00000572579 MEP1BQ16820 701 aa15.29■□□□□ 0.04
CHD3-214ENST00000572579 C1orf174Q8IYL3 243 aa15.29■□□□□ 0.04
CHD3-214ENST00000572579 RAB1CQ92928 201 aa15.29■□□□□ 0.04
CHD3-214ENST00000572579 HAVCR1Q96D42 359 aa15.29■□□□□ 0.04
CHD3-214ENST00000572579 RSRC1Q96IZ7 334 aaKnown RBP15.29■□□□□ 0.04
CHD3-214ENST00000572579 ELOVL3Q9HB03 270 aa15.29■□□□□ 0.04
CHD3-214ENST00000572579 CYSLTR2Q9NS75 346 aa15.29■□□□□ 0.04
CHD3-214ENST00000572579 ASH2LQ9UBL3 628 aa15.29■□□□□ 0.04
CHD3-214ENST00000572579 ZDHHC8Q9ULC8 765 aa15.29■□□□□ 0.04
CHD3-214ENST00000572579 NDRG4Q9ULP0 352 aaKnown RBP15.29■□□□□ 0.04
CHD3-214ENST00000572579 SOCS2O14508 198 aa15.28■□□□□ 0.04
CHD3-214ENST00000572579 KHDRBS3O75525 346 aaKnown RBP15.28■□□□□ 0.04
CHD3-214ENST00000572579 IGHV2-70P01814 119 aa15.28■□□□□ 0.04
CHD3-214ENST00000572579 ANPEPP15144 967 aa15.28■□□□□ 0.04
CHD3-214ENST00000572579 MSX2P35548 267 aaPredicted RBP15.28■□□□□ 0.04
CHD3-214ENST00000572579 LIPAP38571 399 aa15.28■□□□□ 0.04
CHD3-214ENST00000572579 ARHGDIAP52565 204 aa15.28■□□□□ 0.04
CHD3-214ENST00000572579 TNFAIP6P98066 277 aaPredicted RBP15.28■□□□□ 0.04
CHD3-214ENST00000572579 SCRN3Q0VDG4 424 aa15.28■□□□□ 0.04
CHD3-214ENST00000572579 HLXQ14774 488 aaPredicted RBP15.28■□□□□ 0.04
CHD3-214ENST00000572579 KCNMB1Q16558 191 aa15.28■□□□□ 0.04
CHD3-214ENST00000572579 GLB1L2Q8IW92 636 aa15.28■□□□□ 0.04
CHD3-214ENST00000572579 OR1F12Q8NHA8 337 aa15.28■□□□□ 0.04
CHD3-214ENST00000572579 SIGLEC11Q96RL6 698 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms