RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 PAMR1Q6UXH9 720 aa17.14■□□□□ 0.33
SKP2-208ENST00000546211 UNQ6494/PRO21346Q6UXR6 183 aa17.14■□□□□ 0.33
SKP2-208ENST00000546211 CFAP77Q6ZQR2 320 aa17.14■□□□□ 0.33
SKP2-208ENST00000546211 RHOUQ7L0Q8 258 aa17.14■□□□□ 0.33
SKP2-208ENST00000546211 LINGO2Q7L985 606 aa17.14■□□□□ 0.33
SKP2-208ENST00000546211 ZNF100Q8IYN0 542 aa17.14■□□□□ 0.33
SKP2-208ENST00000546211 OR5AK2Q8NH90 309 aa17.14■□□□□ 0.33
SKP2-208ENST00000546211 GMPPAQ96IJ6 420 aaPredicted RBP17.14■□□□□ 0.33
SKP2-208ENST00000546211 COMMD4Q9H0A8 199 aa17.14■□□□□ 0.33
SKP2-208ENST00000546211 TMEM38BQ9NVV0 291 aa17.14■□□□□ 0.33
SKP2-208ENST00000546211 URB1O60287 2271 aaKnown RBP17.14■□□□□ 0.33
SKP2-208ENST00000546211 AHRRA9YTQ3 701 aa17.13■□□□□ 0.33
SKP2-208ENST00000546211 ZNHIT1O43257 154 aa17.13■□□□□ 0.33
SKP2-208ENST00000546211 ZFPL1O95159 310 aa17.13■□□□□ 0.33
SKP2-208ENST00000546211 CDRT1O95170 752 aa17.13■□□□□ 0.33
SKP2-208ENST00000546211 IL1AP01583 271 aa17.13■□□□□ 0.33
SKP2-208ENST00000546211 AGTR1P30556 359 aa17.13■□□□□ 0.33
SKP2-208ENST00000546211 CCR9P51686 369 aa17.13■□□□□ 0.33
SKP2-208ENST00000546211 ENDOGQ14249 297 aaKnown RBP17.13■□□□□ 0.33
SKP2-208ENST00000546211 INSL4Q14641 139 aa17.13■□□□□ 0.33
SKP2-208ENST00000546211 STK11Q15831 433 aa17.13■□□□□ 0.33
SKP2-208ENST00000546211 ACSM3Q53FZ2 586 aa17.13■□□□□ 0.33
SKP2-208ENST00000546211 YIF1BQ5BJH7 314 aa17.13■□□□□ 0.33
SKP2-208ENST00000546211 FAM27BQ5VT28 67 aa17.13■□□□□ 0.33
SKP2-208ENST00000546211 KLHL24Q6TFL4 600 aa17.13■□□□□ 0.33
SKP2-208ENST00000546211 CEACAM19Q7Z692 300 aa17.13■□□□□ 0.33
SKP2-208ENST00000546211 LRRC18Q8N456 261 aa17.13■□□□□ 0.33
SKP2-208ENST00000546211 GJC3Q8NFK1 279 aa17.13■□□□□ 0.33
SKP2-208ENST00000546211 C4orf45Q96LM5 186 aa17.13■□□□□ 0.33
SKP2-208ENST00000546211 FOXB1Q99853 325 aa17.13■□□□□ 0.33
SKP2-208ENST00000546211 SLC7A10Q9NS82 523 aa17.13■□□□□ 0.33
SKP2-208ENST00000546211 UPB1Q9UBR1 384 aa17.13■□□□□ 0.33
SKP2-208ENST00000546211 GTF2A1LQ9UNN4 478 aa17.13■□□□□ 0.33
SKP2-208ENST00000546211 R4GMQ9 66 aa17.13■□□□□ 0.33
SKP2-208ENST00000546211 ACACAQ13085 2346 aa17.12■□□□□ 0.33
SKP2-208ENST00000546211 LOC400499M0QZD8 3231 aa17.12■□□□□ 0.33
SKP2-208ENST00000546211 TMEM212A6NML5 194 aa17.12■□□□□ 0.33
SKP2-208ENST00000546211 ZNF587BE7ETH6 402 aa17.12■□□□□ 0.33
SKP2-208ENST00000546211 TAF4O00268 1085 aa17.12■□□□□ 0.33
SKP2-208ENST00000546211 IGHV3-9P01782 118 aa17.12■□□□□ 0.33
SKP2-208ENST00000546211 FAM87AP0C7U9 286 aa17.12■□□□□ 0.33
SKP2-208ENST00000546211 RPS19P39019 145 aaKnown RBP17.12■□□□□ 0.33
SKP2-208ENST00000546211 SF3B4Q15427 424 aaKnown RBP eCLIP17.12■□□□□ 0.33
SKP2-208ENST00000546211 TAF13Q15543 124 aa17.12■□□□□ 0.33
SKP2-208ENST00000546211 ZNF829Q3KNS6 432 aaPredicted RBP17.12■□□□□ 0.33
SKP2-208ENST00000546211 KRTCAP3Q53RY4 240 aa17.12■□□□□ 0.33
SKP2-208ENST00000546211 NUFIP2Q7Z417 695 aaKnown RBP17.12■□□□□ 0.33
SKP2-208ENST00000546211 ZNF676Q8N7Q3 588 aa17.12■□□□□ 0.33
SKP2-208ENST00000546211 ZCCHC14Q8WYQ9 949 aaKnown RBP17.12■□□□□ 0.33
SKP2-208ENST00000546211 MED18Q9BUE0 208 aa17.12■□□□□ 0.33
SKP2-208ENST00000546211 SNTG1Q9NSN8 517 aa17.12■□□□□ 0.33
SKP2-208ENST00000546211 TUBD1Q9UJT1 453 aa17.12■□□□□ 0.33
SKP2-208ENST00000546211 RER1O15258 196 aa17.11■□□□□ 0.33
SKP2-208ENST00000546211 SS18L1O75177 396 aaPredicted RBP17.11■□□□□ 0.33
SKP2-208ENST00000546211 SC5DO75845 299 aa17.11■□□□□ 0.33
SKP2-208ENST00000546211 GATBO75879 557 aaKnown RBP17.11■□□□□ 0.33
SKP2-208ENST00000546211 CST2P09228 141 aa17.11■□□□□ 0.33
SKP2-208ENST00000546211 HSD11B1P28845 292 aa17.11■□□□□ 0.33
SKP2-208ENST00000546211 DCTDP32321 178 aa17.11■□□□□ 0.33
SKP2-208ENST00000546211 SDC2P34741 201 aa17.11■□□□□ 0.33
SKP2-208ENST00000546211 MXD1Q05195 221 aa17.11■□□□□ 0.33
SKP2-208ENST00000546211 WDR38Q5JTN6 314 aa17.11■□□□□ 0.33
SKP2-208ENST00000546211 UBE2J2Q8N2K1 259 aa17.11■□□□□ 0.33
SKP2-208ENST00000546211 PRSS35Q8N3Z0 413 aa17.11■□□□□ 0.33
SKP2-208ENST00000546211 OR10S1Q8NGN2 331 aa17.11■□□□□ 0.33
SKP2-208ENST00000546211 OR13C5Q8NGS8 318 aa17.11■□□□□ 0.33
SKP2-208ENST00000546211 WNT2BQ93097 391 aa17.11■□□□□ 0.33
SKP2-208ENST00000546211 SLIRPQ9GZT3 109 aaKnown RBP17.11■□□□□ 0.33
SKP2-208ENST00000546211 NIPAL2Q9H841 368 aa17.11■□□□□ 0.33
SKP2-208ENST00000546211 FBXL3Q9UKT7 428 aa17.11■□□□□ 0.33
SKP2-208ENST00000546211 DNAJC13O75165 2243 aa17.11■□□□□ 0.33
SKP2-208ENST00000546211 OR4C45A6NMZ5 311 aa17.11■□□□□ 0.33
SKP2-208ENST00000546211 LOC110117498-PIK3R3F6TDL0 507 aa17.11■□□□□ 0.33
SKP2-208ENST00000546211 RPL36A-HNRNPH2H7BZ11 118 aa17.11■□□□□ 0.33
SKP2-208ENST00000546211 CASKO14936 926 aa17.11■□□□□ 0.33
SKP2-208ENST00000546211 FARS2O95363 451 aaKnown RBP17.11■□□□□ 0.33
SKP2-208ENST00000546211 B4GALT1P15291 398 aa17.11■□□□□ 0.33
SKP2-208ENST00000546211 PAX7P23759 505 aa17.11■□□□□ 0.33
SKP2-208ENST00000546211 RPS11P62280 158 aaKnown RBP eCLIP17.11■□□□□ 0.33
SKP2-208ENST00000546211 LINC00303Q3SY05 128 aa17.11■□□□□ 0.33
SKP2-208ENST00000546211 NRN1LQ496H8 165 aa17.11■□□□□ 0.33
SKP2-208ENST00000546211 ACSF3Q4G176 576 aaPredicted RBP17.11■□□□□ 0.33
SKP2-208ENST00000546211 ZMAT1Q5H9K5 638 aa17.11■□□□□ 0.33
SKP2-208ENST00000546211 ZNF585AQ6P3V2 769 aa17.11■□□□□ 0.33
SKP2-208ENST00000546211 ABHD12BQ7Z5M8 362 aaPredicted RBP17.11■□□□□ 0.33
SKP2-208ENST00000546211 CATSPERDQ86XM0 798 aa17.11■□□□□ 0.33
SKP2-208ENST00000546211 SLC22A24Q8N4F4 322 aa17.11■□□□□ 0.33
SKP2-208ENST00000546211 MCFD2Q8NI22 146 aa17.11■□□□□ 0.33
SKP2-208ENST00000546211 C12orf49Q9H741 205 aa17.11■□□□□ 0.33
SKP2-208ENST00000546211 EMC9Q9Y3B6 208 aa17.11■□□□□ 0.33
SKP2-208ENST00000546211 CEP295Q9C0D2 2601 aa17.1■□□□□ 0.33
SKP2-208ENST00000546211 TMEM269A0A1B0GVZ9 245 aa17.1■□□□□ 0.33
SKP2-208ENST00000546211 DVL2O14641 736 aa17.1■□□□□ 0.33
SKP2-208ENST00000546211 SRSF10O75494 262 aaKnown RBP17.1■□□□□ 0.33
SKP2-208ENST00000546211 ARL6IP5O75915 188 aa17.1■□□□□ 0.33
SKP2-208ENST00000546211 PNPP00491 289 aa17.1■□□□□ 0.33
SKP2-208ENST00000546211 MYL9P24844 172 aa17.1■□□□□ 0.33
SKP2-208ENST00000546211 CALRP27797 417 aaKnown RBP17.1■□□□□ 0.33
SKP2-208ENST00000546211 KIR3DL2P43630 455 aa17.1■□□□□ 0.33
SKP2-208ENST00000546211 RORCP51449 518 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms