RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 OR10H5Q8NGA6 315 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 WDFY2Q96P53 400 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 SCNM1Q9BWG6 230 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 SF3B5Q9BWJ5 86 aaKnown RBP10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 PNRC2Q9NPJ4 139 aaKnown RBP10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 G6PC2Q9NQR9 355 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 ASH2LQ9UBL3 628 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 GTF2A1LQ9UNN4 478 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 KCNMB2Q9Y691 235 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 TRAV8-7A0A075B6U6 113 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 TAF4O00268 1085 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 LMX1BO60663 402 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 CYTIPO60759 359 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 SERPINA3P01011 423 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 ADRA2CP18825 462 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 ATF1P18846 271 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 MYL9P24844 172 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 AZGP1P25311 298 aaKnown RBP10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 ENDOGQ14249 297 aaKnown RBP10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 KCNMB1Q16558 191 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 SGCAQ16586 387 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 HSD17B12Q53GQ0 312 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 KCTD18Q6PI47 426 aaPredicted RBP10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 FOXL2NBQ6ZUU3 175 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 FCRLAQ7L513 359 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 HDDC2Q7Z4H3 204 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 CROCCP3Q8IVE0 287 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 ZNF676Q8N7Q3 588 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 ZNF416Q9BWM5 594 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 BRD7Q9NPI1 651 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 DAPK2Q9UIK4 370 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 CLEC4AQ9UMR7 237 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 B3GNT3Q9Y2A9 372 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 EMC9Q9Y3B6 208 aa10.84□□□□□ -0.67
AP003559.1-201ENST00000540906 LAMA5O15230 3695 aa10.83□□□□□ -0.68
AP003559.1-201ENST00000540906 hCG_2014768A0A024R1R8 64 aa10.83□□□□□ -0.68
AP003559.1-201ENST00000540906 TRBV5-7A0A0A0MS05 114 aa10.83□□□□□ -0.68
AP003559.1-201ENST00000540906 TRAV1-2A0A0B4J238 106 aa10.83□□□□□ -0.68
AP003559.1-201ENST00000540906 C5orf63A6NC05 138 aa10.83□□□□□ -0.68
AP003559.1-201ENST00000540906 DHHO43323 396 aa10.83□□□□□ -0.68
AP003559.1-201ENST00000540906 ZNF254O75437 659 aa10.83□□□□□ -0.68
AP003559.1-201ENST00000540906 GATBO75879 557 aaKnown RBP10.83□□□□□ -0.68
AP003559.1-201ENST00000540906 RASGEF1BQ0VAM2 473 aa10.83□□□□□ -0.68
AP003559.1-201ENST00000540906 Q499Y3 187 aa10.83□□□□□ -0.68
AP003559.1-201ENST00000540906 FAM109AQ8N4B1 249 aa10.83□□□□□ -0.68
AP003559.1-201ENST00000540906 DTX3Q8N9I9 347 aa10.83□□□□□ -0.68
AP003559.1-201ENST00000540906 OR5H6Q8NGV6 325 aa10.83□□□□□ -0.68
AP003559.1-201ENST00000540906 ABTB1Q969K4 478 aaPredicted RBP10.83□□□□□ -0.68
AP003559.1-201ENST00000540906 CEP19Q96LK0 163 aa10.83□□□□□ -0.68
AP003559.1-201ENST00000540906 RBM24Q9BX46 236 aaKnown RBP10.83□□□□□ -0.68
AP003559.1-201ENST00000540906 PALMDQ9NP74 551 aa10.83□□□□□ -0.68
AP003559.1-201ENST00000540906 ABCB10Q9NRK6 738 aa10.83□□□□□ -0.68
AP003559.1-201ENST00000540906 MALT1Q9UDY8 824 aa10.83□□□□□ -0.68
AP003559.1-201ENST00000540906 R4GMQ9 66 aa10.83□□□□□ -0.68
AP003559.1-201ENST00000540906 TMEM212A6NML5 194 aa10.82□□□□□ -0.68
AP003559.1-201ENST00000540906 HSPB2A8KAH6 182 aa10.82□□□□□ -0.68
AP003559.1-201ENST00000540906 KLK10O43240 276 aa10.82□□□□□ -0.68
AP003559.1-201ENST00000540906 UPK1BO75841 260 aa10.82□□□□□ -0.68
AP003559.1-201ENST00000540906 CEACAM4O75871 244 aa10.82□□□□□ -0.68
AP003559.1-201ENST00000540906 H2BFMP0C1H6 154 aa10.82□□□□□ -0.68
AP003559.1-201ENST00000540906 RAB3BP20337 219 aa10.82□□□□□ -0.68
AP003559.1-201ENST00000540906 ZNF45Q02386 682 aa10.82□□□□□ -0.68
AP003559.1-201ENST00000540906 MRPL28Q13084 256 aaKnown RBP10.82□□□□□ -0.68
AP003559.1-201ENST00000540906 HSPB2Q16082 182 aa10.82□□□□□ -0.68
AP003559.1-201ENST00000540906 AAED1Q7RTV5 226 aa10.82□□□□□ -0.68
AP003559.1-201ENST00000540906 LRRTM1Q86UE6 522 aa10.82□□□□□ -0.68
AP003559.1-201ENST00000540906 EGFL6Q8IUX8 553 aa10.82□□□□□ -0.68
AP003559.1-201ENST00000540906 DNAAF1Q8NEP3 725 aa10.82□□□□□ -0.68
AP003559.1-201ENST00000540906 FNDC9Q8TBE3 224 aa10.82□□□□□ -0.68
AP003559.1-201ENST00000540906 CPNE4Q96A23 557 aaPredicted RBP10.82□□□□□ -0.68
AP003559.1-201ENST00000540906 ALKBH3Q96Q83 286 aaPredicted RBP10.82□□□□□ -0.68
AP003559.1-201ENST00000540906 NKX3-1Q99801 234 aaPredicted RBP10.82□□□□□ -0.68
AP003559.1-201ENST00000540906 ULBP2Q9BZM5 246 aa10.82□□□□□ -0.68
AP003559.1-201ENST00000540906 C14orf119Q9NWQ9 140 aa10.82□□□□□ -0.68
AP003559.1-201ENST00000540906 FAM206AQ9NX38 181 aa10.82□□□□□ -0.68
AP003559.1-201ENST00000540906 POLR1DQ9Y2S0 133 aa10.82□□□□□ -0.68
AP003559.1-201ENST00000540906 CFAP47Q6ZTR5 3102 aa10.82□□□□□ -0.68
AP003559.1-201ENST00000540906 FRYQ5TBA9 3013 aa10.82□□□□□ -0.68
AP003559.1-201ENST00000540906 A0A1B0GVC2 190 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 A6NIN4 97 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 E9PLN8 166 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 K7EM74 188 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 GPR171O14626 319 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 IGHV3-9P01782 118 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 PDGFAP04085 211 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 EIF4EP06730 217 aaKnown RBP10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 OCM2P0CE71 109 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 SNRPBP14678 240 aaKnown RBP10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 SRMP19623 302 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 CCR9P51686 369 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 SLC10A1Q14973 349 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 SPANXN2Q5MJ10 180 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 DDI2Q5TDH0 399 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 STEAP3Q658P3 488 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 CNIH2Q6PI25 160 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 PAMR1Q6UXH9 720 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 SLC22A16Q86VW1 577 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 TPRA1Q86W33 373 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 LYSMD2Q8IV50 215 aa10.81□□□□□ -0.68
AP003559.1-201ENST00000540906 CENPSQ8N2Z9 138 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms