RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 YPEL4Q96NS1 127 aa3.32□□□□□ -1.88
CLNS1A-209ENST00000527299 SLC46A1Q96NT5 459 aa3.32□□□□□ -1.88
CLNS1A-209ENST00000527299 PRAP1Q96NZ9 151 aa3.32□□□□□ -1.88
CLNS1A-209ENST00000527299 GPR78Q96P69 363 aa3.32□□□□□ -1.88
CLNS1A-209ENST00000527299 TP53RKQ96S44 253 aa3.32□□□□□ -1.88
CLNS1A-209ENST00000527299 PCYT2Q99447 389 aa3.32□□□□□ -1.88
CLNS1A-209ENST00000527299 SEPHS2Q99611 448 aa3.32□□□□□ -1.88
CLNS1A-209ENST00000527299 MGLLQ99685 303 aa3.32□□□□□ -1.88
CLNS1A-209ENST00000527299 CBWD1Q9BRT8 395 aa3.32□□□□□ -1.88
CLNS1A-209ENST00000527299 SYT17Q9BSW7 474 aa3.32□□□□□ -1.88
CLNS1A-209ENST00000527299 OR8D2Q9GZM6 311 aa3.32□□□□□ -1.88
CLNS1A-209ENST00000527299 SIK2Q9H0K1 926 aa3.32□□□□□ -1.88
CLNS1A-209ENST00000527299 METTL7AQ9H8H3 244 aa3.32□□□□□ -1.88
CLNS1A-209ENST00000527299 PLAC1Q9HBJ0 212 aa3.32□□□□□ -1.88
CLNS1A-209ENST00000527299 LTB4R2Q9NPC1 389 aa3.32□□□□□ -1.88
CLNS1A-209ENST00000527299 HEBP1Q9NRV9 189 aa3.32□□□□□ -1.88
CLNS1A-209ENST00000527299 CBLN4Q9NTU7 201 aa3.32□□□□□ -1.88
CLNS1A-209ENST00000527299 TMEM100Q9NV29 134 aa3.32□□□□□ -1.88
CLNS1A-209ENST00000527299 MRPS18AQ9NVS2 196 aaKnown RBP3.32□□□□□ -1.88
CLNS1A-209ENST00000527299 HIF1ANQ9NWT6 349 aa3.32□□□□□ -1.88
CLNS1A-209ENST00000527299 MARCH5Q9NX47 278 aa3.32□□□□□ -1.88
CLNS1A-209ENST00000527299 P4HTMQ9NXG6 502 aa3.32□□□□□ -1.88
CLNS1A-209ENST00000527299 PPP1R3CQ9UQK1 317 aa3.32□□□□□ -1.88
CLNS1A-209ENST00000527299 PKP3Q9Y446 797 aa3.32□□□□□ -1.88
CLNS1A-209ENST00000527299 ABCA3Q99758 1704 aa3.32□□□□□ -1.88
CLNS1A-209ENST00000527299 SIGLEC1Q9BZZ2 1709 aa3.32□□□□□ -1.88
CLNS1A-209ENST00000527299 FOCADQ5VW36 1801 aa3.32□□□□□ -1.88
CLNS1A-209ENST00000527299 GBF1Q92538 1859 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 hCG_1818297A0A087WSY0 165 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 TGIF2-C20orf24A0A0A6YYL0 155 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 A0A0G2JN53 185 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 LOC285095A0A1B0GVY8 99 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 hCG_1809904A0A1W2PP81 198 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 A0A1W2PPE2 198 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 A0A1W2PPV4 95 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 A0A1W2PR64 198 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 A0A1W2PRV1 198 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 TCRBV7S3A2A0A539 114 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 ANKRD20A5PA0PJZ0 165 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 RNF222A6NCQ9 220 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 OR52A4PA6NMU1 304 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 ZNF705EA8MWA4 302 aaPredicted RBP3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 IDSB3KWA1 339 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 APOC4-APOC2K7ER74 178 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 CXCR6O00574 342 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 MAGEB4O15481 346 aaPredicted RBP3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 GPR39O43194 453 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 BCL2L11O43521 198 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 SYT7O43581 403 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 TLX3O43711 291 aaPredicted RBP3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 MFSD11O43934 449 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 CTSVO60911 334 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 ADAP1O75689 374 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 GJB3O75712 270 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 TOXO94900 526 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 CDRT1O95170 752 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 SIX3O95343 332 aaPredicted RBP3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 AIFM1O95831 613 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 SNAI1O95863 264 aaPredicted RBP3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 ACTL6AO96019 429 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 CST4P01036 141 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 CST1P01037 141 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 PDYNP01213 254 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 TK1P04183 234 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 ARG1P05089 322 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 UMODP07911 640 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 SOD3P08294 240 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 CST2P09228 141 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 HNRNPA1P09651 372 aaKnown RBP eCLIP3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 ALPIP09923 528 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 CALCBP10092 127 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 SELEP16581 610 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 MSR1P21757 451 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 IDSP22304 550 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 IL12BP29460 328 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 AGTR1P30556 359 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 GCH1P30793 250 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 AKT2P31751 481 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 TIMP3P35625 211 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 RPL4P36578 427 aaKnown RBP3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 LGALS7P47929 136 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 CYB561P49447 251 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 STK19P49842 368 aaPredicted RBP3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 CRYBA4P53673 196 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 TPI1P60174 286 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 RANP62826 216 aaKnown RBP3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 NKX6-1P78426 367 aaPredicted RBP3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 CCL7P80098 99 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 SPIBQ01892 262 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 TLE1Q04724 770 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 TGM3Q08188 693 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 MAMLD1Q13495 774 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 TSTA3Q13630 321 aaPredicted RBP3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 GTF2H3Q13889 308 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 TAZQ16635 292 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 IQCJQ1A5X6 159 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 SLC22A6Q4U2R8 563 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 MORN2Q502X0 79 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 ARL13AQ5H913 290 aaPredicted RBP3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 ELFN2Q5R3F8 820 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms