RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 THRSPQ92748 146 aa18.09■□□□□ 0.49
SMCO4-203ENST00000526869 SLC25A46Q96AG3 418 aa18.09■□□□□ 0.49
SMCO4-203ENST00000526869 ABHD17AQ96GS6 310 aa18.09■□□□□ 0.49
SMCO4-203ENST00000526869 RBM24Q9BX46 236 aaKnown RBP18.09■□□□□ 0.49
SMCO4-203ENST00000526869 COMMD4Q9H0A8 199 aa18.09■□□□□ 0.49
SMCO4-203ENST00000526869 GPR35Q9HC97 309 aa18.09■□□□□ 0.49
SMCO4-203ENST00000526869 TMEM38BQ9NVV0 291 aa18.09■□□□□ 0.49
SMCO4-203ENST00000526869 FRRS1LQ9P0K9 344 aa18.09■□□□□ 0.49
SMCO4-203ENST00000526869 RAXQ9Y2V3 346 aa18.09■□□□□ 0.49
SMCO4-203ENST00000526869 R4GMQ9 66 aa18.09■□□□□ 0.49
SMCO4-203ENST00000526869 CACNA1AO00555 2505 aa18.09■□□□□ 0.49
SMCO4-203ENST00000526869 DNAJC13O75165 2243 aa18.08■□□□□ 0.49
SMCO4-203ENST00000526869 RPL36A-HNRNPH2H7BZ11 118 aa18.08■□□□□ 0.48
SMCO4-203ENST00000526869 ARL6IP5O75915 188 aa18.08■□□□□ 0.48
SMCO4-203ENST00000526869 ZFPL1O95159 310 aa18.08■□□□□ 0.48
SMCO4-203ENST00000526869 CDRT1O95170 752 aa18.08■□□□□ 0.48
SMCO4-203ENST00000526869 WNT11O96014 354 aa18.08■□□□□ 0.48
SMCO4-203ENST00000526869 RORCP51449 518 aa18.08■□□□□ 0.48
SMCO4-203ENST00000526869 ENDOGQ14249 297 aaKnown RBP18.08■□□□□ 0.48
SMCO4-203ENST00000526869 ZNF829Q3KNS6 432 aaPredicted RBP18.08■□□□□ 0.48
SMCO4-203ENST00000526869 ZMAT1Q5H9K5 638 aa18.08■□□□□ 0.48
SMCO4-203ENST00000526869 OR7E24Q6IFN5 339 aa18.08■□□□□ 0.48
SMCO4-203ENST00000526869 CORO6Q6QEF8 472 aa18.08■□□□□ 0.48
SMCO4-203ENST00000526869 CEACAM19Q7Z692 300 aa18.08■□□□□ 0.48
SMCO4-203ENST00000526869 CATSPERDQ86XM0 798 aa18.08■□□□□ 0.48
SMCO4-203ENST00000526869 OR10S1Q8NGN2 331 aa18.08■□□□□ 0.48
SMCO4-203ENST00000526869 MCFD2Q8NI22 146 aa18.08■□□□□ 0.48
SMCO4-203ENST00000526869 PDCD1LG2Q9BQ51 273 aa18.08■□□□□ 0.48
SMCO4-203ENST00000526869 WACQ9BTA9 647 aa18.08■□□□□ 0.48
SMCO4-203ENST00000526869 ZNF416Q9BWM5 594 aa18.08■□□□□ 0.48
SMCO4-203ENST00000526869 CRLF2Q9HC73 371 aa18.08■□□□□ 0.48
SMCO4-203ENST00000526869 ASH2LQ9UBL3 628 aa18.08■□□□□ 0.48
SMCO4-203ENST00000526869 A0A075B6Q4 140 aa18.07■□□□□ 0.48
SMCO4-203ENST00000526869 A0A087WV48 116 aa18.07■□□□□ 0.48
SMCO4-203ENST00000526869 SS18L1O75177 396 aaPredicted RBP18.07■□□□□ 0.48
SMCO4-203ENST00000526869 CST2P09228 141 aa18.07■□□□□ 0.48
SMCO4-203ENST00000526869 UCHL1P09936 223 aa18.07■□□□□ 0.48
SMCO4-203ENST00000526869 SDC2P34741 201 aa18.07■□□□□ 0.48
SMCO4-203ENST00000526869 KIR3DL2P43630 455 aa18.07■□□□□ 0.48
SMCO4-203ENST00000526869 MOGQ16653 247 aa18.07■□□□□ 0.48
SMCO4-203ENST00000526869 PLEKHN1Q494U1 663 aaPredicted RBP18.07■□□□□ 0.48
SMCO4-203ENST00000526869 CFAP77Q6ZQR2 320 aa18.07■□□□□ 0.48
SMCO4-203ENST00000526869 TPRA1Q86W33 373 aa18.07■□□□□ 0.48
SMCO4-203ENST00000526869 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.07■□□□□ 0.48
SMCO4-203ENST00000526869 PRSS35Q8N3Z0 413 aa18.07■□□□□ 0.48
SMCO4-203ENST00000526869 GJC3Q8NFK1 279 aa18.07■□□□□ 0.48
SMCO4-203ENST00000526869 APH1AQ96BI3 265 aa18.07■□□□□ 0.48
SMCO4-203ENST00000526869 GMPPAQ96IJ6 420 aaPredicted RBP18.07■□□□□ 0.48
SMCO4-203ENST00000526869 TP53TG5Q9Y2B4 290 aa18.07■□□□□ 0.48
SMCO4-203ENST00000526869 FRYQ5TBA9 3013 aa18.06■□□□□ 0.48
SMCO4-203ENST00000526869 TRAV1-2A0A0B4J238 106 aa18.06■□□□□ 0.48
SMCO4-203ENST00000526869 TRBV5-5A0A0J9YX44 114 aa18.06■□□□□ 0.48
SMCO4-203ENST00000526869 AHRRA9YTQ3 701 aa18.06■□□□□ 0.48
SMCO4-203ENST00000526869 TGM6O95932 706 aa18.06■□□□□ 0.48
SMCO4-203ENST00000526869 MYL9P24844 172 aa18.06■□□□□ 0.48
SMCO4-203ENST00000526869 MMP16P51512 607 aa18.06■□□□□ 0.48
SMCO4-203ENST00000526869 ROR2Q01974 943 aaKnown RBP18.06■□□□□ 0.48
SMCO4-203ENST00000526869 INSL4Q14641 139 aa18.06■□□□□ 0.48
SMCO4-203ENST00000526869 SF3B4Q15427 424 aaKnown RBP eCLIP18.06■□□□□ 0.48
SMCO4-203ENST00000526869 CEACAM16Q2WEN9 425 aa18.06■□□□□ 0.48
SMCO4-203ENST00000526869 WDR38Q5JTN6 314 aa18.06■□□□□ 0.48
SMCO4-203ENST00000526869 TSPO2Q5TGU0 170 aa18.06■□□□□ 0.48
SMCO4-203ENST00000526869 SPATC1Q76KD6 591 aa18.06■□□□□ 0.48
SMCO4-203ENST00000526869 LINGO2Q7L985 606 aa18.06■□□□□ 0.48
SMCO4-203ENST00000526869 SYT9Q86SS6 491 aa18.06■□□□□ 0.48
SMCO4-203ENST00000526869 IL17RDQ8NFM7 739 aa18.06■□□□□ 0.48
SMCO4-203ENST00000526869 RGP1Q92546 391 aaPredicted RBP18.06■□□□□ 0.48
SMCO4-203ENST00000526869 GPR137Q96N19 417 aa18.06■□□□□ 0.48
SMCO4-203ENST00000526869 ALKBH3Q96Q83 286 aaPredicted RBP18.06■□□□□ 0.48
SMCO4-203ENST00000526869 FOXB1Q99853 325 aa18.06■□□□□ 0.48
SMCO4-203ENST00000526869 MOB1AQ9H8S9 216 aa18.06■□□□□ 0.48
SMCO4-203ENST00000526869 CALHM2Q9HA72 323 aa18.06■□□□□ 0.48
SMCO4-203ENST00000526869 PNRC2Q9NPJ4 139 aaKnown RBP18.06■□□□□ 0.48
SMCO4-203ENST00000526869 SNTG1Q9NSN8 517 aa18.06■□□□□ 0.48
SMCO4-203ENST00000526869 CENPMQ9NSP4 180 aa18.06■□□□□ 0.48
SMCO4-203ENST00000526869 DDX28Q9NUL7 540 aaKnown RBP18.06■□□□□ 0.48
SMCO4-203ENST00000526869 TUBD1Q9UJT1 453 aa18.06■□□□□ 0.48
SMCO4-203ENST00000526869 ZNF879B4DU55 563 aa18.05■□□□□ 0.48
SMCO4-203ENST00000526869 LOC110117498-PIK3R3F6TDL0 507 aa18.05■□□□□ 0.48
SMCO4-203ENST00000526869 KRT33AO76009 404 aa18.05■□□□□ 0.48
SMCO4-203ENST00000526869 CTSSP25774 331 aa18.05■□□□□ 0.48
SMCO4-203ENST00000526869 MAPK3P27361 379 aaPredicted RBP18.05■□□□□ 0.48
SMCO4-203ENST00000526869 AGTR1P30556 359 aa18.05■□□□□ 0.48
SMCO4-203ENST00000526869 GRB2P62993 217 aaKnown RBP18.05■□□□□ 0.48
SMCO4-203ENST00000526869 KLHL24Q6TFL4 600 aa18.05■□□□□ 0.48
SMCO4-203ENST00000526869 ZNF627Q7L945 461 aa18.05■□□□□ 0.48
SMCO4-203ENST00000526869 P4HA3Q7Z4N8 544 aa18.05■□□□□ 0.48
SMCO4-203ENST00000526869 ZNF676Q8N7Q3 588 aa18.05■□□□□ 0.48
SMCO4-203ENST00000526869 OR6Q1Q8NGQ2 317 aa18.05■□□□□ 0.48
SMCO4-203ENST00000526869 EXTL1Q92935 676 aa18.05■□□□□ 0.48
SMCO4-203ENST00000526869 WNT2BQ93097 391 aa18.05■□□□□ 0.48
SMCO4-203ENST00000526869 ZNF837Q96EG3 531 aaPredicted RBP18.05■□□□□ 0.48
SMCO4-203ENST00000526869 SLC7A10Q9NS82 523 aa18.05■□□□□ 0.48
SMCO4-203ENST00000526869 URB1O60287 2271 aaKnown RBP18.05■□□□□ 0.48
SMCO4-203ENST00000526869 A0A1B0GTH9 108 aa18.04■□□□□ 0.48
SMCO4-203ENST00000526869 IQCMA0A1B0GVH7 501 aa18.04■□□□□ 0.48
SMCO4-203ENST00000526869 ZNF587BE7ETH6 402 aa18.04■□□□□ 0.48
SMCO4-203ENST00000526869 CASKO14936 926 aa18.04■□□□□ 0.48
SMCO4-203ENST00000526869 PNPP00491 289 aa18.04■□□□□ 0.48
SMCO4-203ENST00000526869 INHBBP09529 407 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms