RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 APOFQ13790 326 aa5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 KRTAP27-1Q3LI81 207 aa5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 KLHL12Q53G59 568 aa5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 KLHL22Q53GT1 634 aa5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 ELFN2Q5R3F8 820 aa5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 C9orf135Q5VTT2 229 aa5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 RNLSQ5VYX0 342 aa5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 SLC18B1Q6NT16 456 aa5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 KCTD18Q6PI47 426 aaPredicted RBP5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 MEX3BQ6ZN04 569 aaKnown RBP5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 CDC20BQ86Y33 519 aa5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 OR4F15Q8NGB8 312 aa5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 OR6K6Q8NGW6 343 aa5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 OR2T27Q8NH04 317 aa5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 OR52N5Q8NH56 324 aa5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 ST7LQ8TDW4 575 aa5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 RNF133Q8WVZ7 376 aa5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 APH1BQ8WW43 257 aa5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 ZNRF4Q8WWF5 429 aa5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 CYGBQ8WWM9 190 aa5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 ASB17Q8WXJ9 295 aa5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 FBXO17Q96EF6 278 aa5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 COG8Q96MW5 612 aa5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 CNN2Q99439 309 aaKnown RBP5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 COQ7Q99807 217 aa5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 SH3GL3Q99963 347 aa5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 TMEM204Q9BSN7 226 aa5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 YTHDF1Q9BYJ9 559 aaKnown RBP5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 OR51V1Q9H2C8 321 aa5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 RERGLQ9H628 205 aa5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 NIPAL2Q9H841 368 aa5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 WDR76Q9H967 626 aa5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 ADGRL4Q9HBW9 690 aa5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 DDX28Q9NUL7 540 aaKnown RBP5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 CNOT2Q9NZN8 540 aaKnown RBP5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 CRIM1Q9NZV1 1036 aa5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 EXOGQ9Y2C4 368 aaKnown RBP5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 LHFPL6Q9Y693 200 aa5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 CADP27708 2225 aa5.54□□□□□ -1.52
IGHV4-55-201ENST00000520889 PTPN13Q12923 2485 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 IGHV1-18A0A0C4DH31 117 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 ZNF503-AS2A6NEH8 195 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 ACOD1A6NK06 481 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 A6NNC1 897 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 DEFB108AA8MXU0 73 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 ZNF878C9JN71 531 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 H3BSA7 217 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 J3QRE1 110 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 SGCEO43556 437 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 SYNGR3O43761 229 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 MRPS14O60783 128 aaKnown RBP5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 ENTPD6O75354 484 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 SULT1C4O75897 302 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 MPZL1O95297 269 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 FADS2O95864 444 aaKnown RBP5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 IGHA1P01876 353 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 HLA-HP01893 362 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 CRYAAP02489 173 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 GYPBP06028 91 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 CD3EP07766 207 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 RPSAP08865 295 aaKnown RBP5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 CCDC159P0C7I6 412 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 CECR9P0C854 216 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 CLUP10909 449 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 DBTP11182 482 aaKnown RBP5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 COX6B1P14854 86 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 CD40P25942 277 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 SSTR2P30874 369 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 OTX1P32242 354 aaPredicted RBP5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 RGS6P49758 472 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 GRB2P62993 217 aaKnown RBP5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 NAAAQ02083 359 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 ROM1Q03395 351 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 EGR3Q06889 387 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 MRPL28Q13084 256 aaKnown RBP5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 TSC22D1Q15714 1073 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 TBC1D28Q2M2D7 210 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 CCDC92Q53HC0 331 aaPredicted RBP5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 PABPC1L2AQ5JQF8 200 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 ARL9Q6T311 187 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 UGT2A3Q6UWM9 527 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 C22orf34Q6ZV56 151 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 VASH1Q7L8A9 365 aaPredicted RBP5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 DPY19L4Q7Z388 723 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 KCTD20Q7Z5Y7 419 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 MDP1Q86V88 176 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 LRRC18Q8N456 261 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 ZNF511Q8NB15 262 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 NUP37Q8NFH4 326 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 BBS1Q8NFJ9 593 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 OR51L1Q8NGJ5 315 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 OR6N2Q8NGY6 317 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 OR1F12Q8NHA8 337 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 FGFBP3Q8TAT2 258 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 LINC01560Q8TB33 94 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 OTULINQ96BN8 352 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 ZMYND19Q96E35 227 aaPredicted RBP5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 MRPL48Q96GC5 212 aaKnown RBP5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 MAP6Q96JE9 813 aa5.53□□□□□ -1.52
IGHV4-55-201ENST00000520889 POM121L2Q96KW2 1035 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms