RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 HORMAD2Q8N7B1 307 aa10.29□□□□□ -0.76
CECR3-201ENST00000428828 ZNF615Q8N8J6 731 aa10.29□□□□□ -0.76
CECR3-201ENST00000428828 POMGNT2Q8NAT1 580 aa10.29□□□□□ -0.76
CECR3-201ENST00000428828 APCDD1LQ8NCL9 501 aa10.29□□□□□ -0.76
CECR3-201ENST00000428828 NFKBIDQ8NI38 313 aa10.29□□□□□ -0.76
CECR3-201ENST00000428828 THAP4Q8WY91 577 aa10.29□□□□□ -0.76
CECR3-201ENST00000428828 NR4A3Q92570 626 aa10.29□□□□□ -0.76
CECR3-201ENST00000428828 RAB8BQ92930 207 aa10.29□□□□□ -0.76
CECR3-201ENST00000428828 MOGAT1Q96PD6 335 aa10.29□□□□□ -0.76
CECR3-201ENST00000428828 CCNL2Q96S94 520 aaPredicted RBP10.29□□□□□ -0.76
CECR3-201ENST00000428828 MED17Q9NVC6 651 aa10.29□□□□□ -0.76
CECR3-201ENST00000428828 ZNF223Q9UK11 482 aaPredicted RBP10.29□□□□□ -0.76
CECR3-201ENST00000428828 LAMA5O15230 3695 aa10.29□□□□□ -0.76
CECR3-201ENST00000428828 FXYD6-FXYD2A0A087WZ82 144 aa10.28□□□□□ -0.76
CECR3-201ENST00000428828 TRAV1-2A0A0B4J238 106 aa10.28□□□□□ -0.76
CECR3-201ENST00000428828 A0A1W2PRQ8 180 aa10.28□□□□□ -0.76
CECR3-201ENST00000428828 OR14I1A6ND48 311 aa10.28□□□□□ -0.76
CECR3-201ENST00000428828 AKR7A3O95154 331 aa10.28□□□□□ -0.76
CECR3-201ENST00000428828 SPDEFO95238 335 aa10.28□□□□□ -0.76
CECR3-201ENST00000428828 IGF2P01344 180 aa10.28□□□□□ -0.76
CECR3-201ENST00000428828 IGFBP1P08833 259 aaPredicted RBP10.28□□□□□ -0.76
CECR3-201ENST00000428828 RNF224P0DH78 156 aa10.28□□□□□ -0.76
CECR3-201ENST00000428828 ABCD3P28288 659 aa10.28□□□□□ -0.76
CECR3-201ENST00000428828 KHKP50053 298 aa10.28□□□□□ -0.76
CECR3-201ENST00000428828 ART1P52961 327 aa10.28□□□□□ -0.76
CECR3-201ENST00000428828 RAB2AP61019 212 aa10.28□□□□□ -0.76
CECR3-201ENST00000428828 CHAF1BQ13112 559 aa10.28□□□□□ -0.76
CECR3-201ENST00000428828 SLC29A4Q7RTT9 530 aa10.28□□□□□ -0.76
CECR3-201ENST00000428828 RELL2Q8NC24 303 aaPredicted RBP10.28□□□□□ -0.76
CECR3-201ENST00000428828 SLC16A11Q8NCK7 471 aa10.28□□□□□ -0.76
CECR3-201ENST00000428828 SLC7A13Q8TCU3 470 aa10.28□□□□□ -0.76
CECR3-201ENST00000428828 C15orf40Q8WUR7 153 aa10.28□□□□□ -0.76
CECR3-201ENST00000428828 IMMP1LQ96LU5 166 aa10.28□□□□□ -0.76
CECR3-201ENST00000428828 OR7D2Q96RA2 312 aa10.28□□□□□ -0.76
CECR3-201ENST00000428828 ACTRT3Q9BYD9 372 aa10.28□□□□□ -0.76
CECR3-201ENST00000428828 FXYD6Q9H0Q3 95 aa10.28□□□□□ -0.76
CECR3-201ENST00000428828 OR10A4Q9H209 315 aa10.28□□□□□ -0.76
CECR3-201ENST00000428828 TUBA4BQ9H853 241 aa10.28□□□□□ -0.76
CECR3-201ENST00000428828 FLVCR2Q9UPI3 526 aa10.28□□□□□ -0.76
CECR3-201ENST00000428828 CBY1Q9Y3M2 126 aa10.28□□□□□ -0.76
CECR3-201ENST00000428828 ZNF891A8MT65 544 aaPredicted RBP10.27□□□□□ -0.76
CECR3-201ENST00000428828 SIGLEC5O15389 551 aa10.27□□□□□ -0.76
CECR3-201ENST00000428828 ZNF44P15621 663 aa10.27□□□□□ -0.76
CECR3-201ENST00000428828 NRG3P56975 720 aa10.27□□□□□ -0.76
CECR3-201ENST00000428828 RNF4P78317 190 aa10.27□□□□□ -0.76
CECR3-201ENST00000428828 BLOC1S1P78537 153 aa10.27□□□□□ -0.76
CECR3-201ENST00000428828 Q0VFX4 171 aa10.27□□□□□ -0.76
CECR3-201ENST00000428828 EBPQ15125 230 aaKnown RBP10.27□□□□□ -0.76
CECR3-201ENST00000428828 ZNHIT3Q15649 155 aaPredicted RBP10.27□□□□□ -0.76
CECR3-201ENST00000428828 SSX2Q16385 188 aa10.27□□□□□ -0.76
CECR3-201ENST00000428828 EXT1Q16394 746 aa10.27□□□□□ -0.76
CECR3-201ENST00000428828 NKAPLQ5M9Q1 402 aa10.27□□□□□ -0.76
CECR3-201ENST00000428828 HLA-DQA1Q5Y7H0 255 aa10.27□□□□□ -0.76
CECR3-201ENST00000428828 ACSM5Q6NUN0 579 aa10.27□□□□□ -0.76
CECR3-201ENST00000428828 TCTN3Q6NUS6 607 aa10.27□□□□□ -0.76
CECR3-201ENST00000428828 C1orf94Q6P1W5 598 aa10.27□□□□□ -0.76
CECR3-201ENST00000428828 C16orf47Q6ZP98 133 aaPredicted RBP10.27□□□□□ -0.76
CECR3-201ENST00000428828 REC114Q7Z4M0 266 aa10.27□□□□□ -0.76
CECR3-201ENST00000428828 SPACA3Q8IXA5 215 aa10.27□□□□□ -0.76
CECR3-201ENST00000428828 ZFP41Q8N8Y5 198 aa10.27□□□□□ -0.76
CECR3-201ENST00000428828 DNAAF1Q8NEP3 725 aa10.27□□□□□ -0.76
CECR3-201ENST00000428828 ADAMTS15Q8TE58 950 aa10.27□□□□□ -0.76
CECR3-201ENST00000428828 CDS1Q92903 461 aa10.27□□□□□ -0.76
CECR3-201ENST00000428828 NEU1Q99519 415 aa10.27□□□□□ -0.76
CECR3-201ENST00000428828 C2orf88Q9BSF0 95 aa10.27□□□□□ -0.76
CECR3-201ENST00000428828 DPH1Q9BZG8 443 aa10.27□□□□□ -0.76
CECR3-201ENST00000428828 WWTR1Q9GZV5 400 aa10.27□□□□□ -0.76
CECR3-201ENST00000428828 NKIRAS2Q9NYR9 191 aa10.27□□□□□ -0.76
CECR3-201ENST00000428828 PRODH2Q9UF12 536 aa10.27□□□□□ -0.76
CECR3-201ENST00000428828 PCDHB10Q9UN67 800 aa10.27□□□□□ -0.76
CECR3-201ENST00000428828 RAXQ9Y2V3 346 aa10.27□□□□□ -0.76
CECR3-201ENST00000428828 KCNE3Q9Y6H6 103 aa10.27□□□□□ -0.76
CECR3-201ENST00000428828 URB1O60287 2271 aaKnown RBP10.27□□□□□ -0.77
CECR3-201ENST00000428828 LOC400499M0QZD8 3231 aa10.27□□□□□ -0.77
CECR3-201ENST00000428828 ANKRD20A5PA0PJZ0 165 aa10.27□□□□□ -0.77
CECR3-201ENST00000428828 J3QRE1 110 aa10.27□□□□□ -0.77
CECR3-201ENST00000428828 HMGN4O00479 90 aa10.27□□□□□ -0.77
CECR3-201ENST00000428828 BCL2L11O43521 198 aa10.27□□□□□ -0.77
CECR3-201ENST00000428828 ICOSLGO75144 302 aa10.27□□□□□ -0.77
CECR3-201ENST00000428828 MT-ND4LP03901 98 aa10.27□□□□□ -0.77
CECR3-201ENST00000428828 GABRA3P34903 492 aa10.27□□□□□ -0.77
CECR3-201ENST00000428828 SRSF4Q08170 494 aaKnown RBP10.27□□□□□ -0.77
CECR3-201ENST00000428828 FABP9Q0Z7S8 132 aa10.27□□□□□ -0.77
CECR3-201ENST00000428828 DUSP5Q16690 384 aa10.27□□□□□ -0.77
CECR3-201ENST00000428828 DCAF10Q5QP82 559 aa10.27□□□□□ -0.77
CECR3-201ENST00000428828 AADACL4Q5VUY2 407 aa10.27□□□□□ -0.77
CECR3-201ENST00000428828 IL20RBQ6UXL0 311 aa10.27□□□□□ -0.77
CECR3-201ENST00000428828 UNQ6494/PRO21346Q6UXR6 183 aa10.27□□□□□ -0.77
CECR3-201ENST00000428828 NPSR1Q6W5P4 371 aa10.27□□□□□ -0.77
CECR3-201ENST00000428828 IL34Q6ZMJ4 242 aa10.27□□□□□ -0.77
CECR3-201ENST00000428828 CXXC5Q7LFL8 322 aaKnown RBP10.27□□□□□ -0.77
CECR3-201ENST00000428828 OLIG3Q7RTU3 272 aa10.27□□□□□ -0.77
CECR3-201ENST00000428828 SLC36A1Q7Z2H8 476 aa10.27□□□□□ -0.77
CECR3-201ENST00000428828 ANGPTL5Q86XS5 388 aa10.27□□□□□ -0.77
CECR3-201ENST00000428828 PRR22Q8IZ63 422 aa10.27□□□□□ -0.77
CECR3-201ENST00000428828 ZFP82Q8N141 532 aa10.27□□□□□ -0.77
CECR3-201ENST00000428828 CDRT4Q8N9R6 151 aa10.27□□□□□ -0.77
CECR3-201ENST00000428828 OR2AK2Q8NG84 335 aa10.27□□□□□ -0.77
CECR3-201ENST00000428828 SPRYD4Q8WW59 207 aaPredicted RBP10.27□□□□□ -0.77
CECR3-201ENST00000428828 XAGE5Q8WWM1 108 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms