RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 ANK3Q12955 4377 aaKnown RBP7.77□□□□□ -1.17
SNORD88A-201ENST00000408314 COL6A5A8TX70 2615 aa7.77□□□□□ -1.17
SNORD88A-201ENST00000408314 IGKV1D-43A0A0B4J1Z2 117 aa7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 LRP5LA4QPB2 252 aa7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 H7C1C5 153 aa7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 ARPC2O15144 300 aa7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 SURF4O15260 269 aa7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 IDH3BO43837 385 aa7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 OR10H3O60404 316 aa7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 SLC16A7O60669 478 aa7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 KRT36O76013 467 aa7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 TXNDC12O95881 172 aa7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 CLPTM1O96005 669 aa7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 ADH4P08319 380 aa7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 IGFBP1P08833 259 aaPredicted RBP7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 TNFRSF1AP19438 455 aa7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 FPR3P25089 353 aa7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 NOS3P29474 1203 aa7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 CRYBB2P43320 205 aa7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 OMPP47874 163 aa7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 LCN6P62502 163 aa7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 CCL8P80075 99 aa7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 FHL1Q13642 323 aa7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 ENDOGQ14249 297 aaKnown RBP7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 CR1LQ2VPA4 569 aa7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 SLC36A3Q495N2 470 aa7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 MESTQ5EB52 335 aa7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 ZNF774Q6NX45 483 aa7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 SHQ1Q6PI26 577 aaKnown RBP7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 TBPL2Q6SJ96 375 aa7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 RNF148Q8N7C7 305 aa7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 OR52L1Q8NGH7 329 aa7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 OR5L1Q8NGL2 311 aa7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 SLC25A40Q8TBP6 338 aa7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 KLF14Q8TD94 323 aaPredicted RBP7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 MARS2Q96GW9 593 aaKnown RBP7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 C7orf34Q96L11 122 aa7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 HDHD2Q9H0R4 259 aa7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 WNT5BQ9H1J7 359 aa7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 SYT4Q9H2B2 425 aa7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 PLEK2Q9NYT0 353 aa7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 TMEFF2Q9UIK5 374 aaPredicted RBP7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 YLPM1P49750 1951 aaKnown RBP7.76□□□□□ -1.17
SNORD88A-201ENST00000408314 MXRA5Q9NR99 2828 aa7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 LOC100509620A0A075B734 347 aa7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 TRAV20A0A0B4J274 112 aa7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 OR6C6A6NF89 314 aa7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 LYNX1G3V0Z9 82 aa7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 SOCS2O14508 198 aa7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 ARPC3O15145 178 aa7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 PHF1O43189 567 aaPredicted RBP7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 TIMM8AO60220 97 aaPredicted RBP7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 PTP4A3O75365 173 aa7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 RP2O75695 350 aa7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 NCR1O76036 304 aa7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 MSMBP08118 114 aa7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 CD55P08174 381 aa7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 LYNX1P0DP58 116 aa7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 WNT5AP41221 380 aa7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 MAGEB1P43366 347 aa7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 ERVS71-1P61550 626 aa7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 GLO1Q04760 184 aa7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 CCNIQ14094 377 aa7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 TRIP10Q15642 601 aa7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 KCNMB1Q16558 191 aa7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 ALKBH6Q3KRA9 238 aa7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 RFPL4BQ6ZWI9 263 aa7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 MEX3DQ86XN8 651 aaKnown RBP7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 ZNF101Q8IZC7 436 aa7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 RFLNBQ8N5W9 214 aa7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 CLDN22Q8N7P3 220 aa7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 GJC3Q8NFK1 279 aa7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 OR52J3Q8NH60 311 aa7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 CLDND2Q8NHS1 167 aa7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 TMEM186Q96B77 213 aa7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 RASD2Q96D21 266 aa7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 CDRT15Q96T59 188 aa7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 MDFIQ99750 246 aa7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 OR2J1Q9GZK6 312 aa7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 RERGLQ9H628 205 aa7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 EMC7Q9NPA0 242 aa7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 IER3IP1Q9Y5U9 82 aa7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 V9GYQ6 96 aa7.75□□□□□ -1.17
SNORD88A-201ENST00000408314 MALRD1Q5VYJ5 2156 aa7.74□□□□□ -1.17
SNORD88A-201ENST00000408314 TRBV4-1A0A0J9YWV2 114 aa7.74□□□□□ -1.17
SNORD88A-201ENST00000408314 IFNL4K9M1U5 179 aa7.74□□□□□ -1.17
SNORD88A-201ENST00000408314 CDC14BO60729 498 aa7.74□□□□□ -1.17
SNORD88A-201ENST00000408314 SEMG1P04279 462 aa7.74□□□□□ -1.17
SNORD88A-201ENST00000408314 GAAP10253 952 aa7.74□□□□□ -1.17
SNORD88A-201ENST00000408314 CTLA4P16410 223 aa7.74□□□□□ -1.17
SNORD88A-201ENST00000408314 HOXB6P17509 224 aaKnown RBP7.74□□□□□ -1.17
SNORD88A-201ENST00000408314 GATA3P23771 443 aa7.74□□□□□ -1.17
SNORD88A-201ENST00000408314 COL8A2P25067 703 aa7.74□□□□□ -1.17
SNORD88A-201ENST00000408314 RRM2P31350 389 aa7.74□□□□□ -1.17
SNORD88A-201ENST00000408314 CENPAP49450 140 aa7.74□□□□□ -1.17
SNORD88A-201ENST00000408314 MMP15P51511 669 aa7.74□□□□□ -1.17
SNORD88A-201ENST00000408314 TSPAN31Q12999 210 aa7.74□□□□□ -1.17
SNORD88A-201ENST00000408314 ECH1Q13011 328 aa7.74□□□□□ -1.17
SNORD88A-201ENST00000408314 GK3PQ14409 553 aa7.74□□□□□ -1.17
SNORD88A-201ENST00000408314 TSTQ16762 297 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms