RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 OR2AJ1Q8NGZ0 328 aa18.55■□□□□ 0.56
TPM1-208ENST00000404484 NELFAQ9H3P2 528 aa18.55■□□□□ 0.56
TPM1-208ENST00000404484 C1orf198Q9H425 327 aa18.55■□□□□ 0.56
TPM1-208ENST00000404484 SLCO1C1Q9NYB5 712 aa18.55■□□□□ 0.56
TPM1-208ENST00000404484 ING1Q9UK53 422 aaPredicted RBP18.55■□□□□ 0.56
TPM1-208ENST00000404484 GABRPO00591 440 aa18.55■□□□□ 0.56
TPM1-208ENST00000404484 MRPL33O75394 65 aaKnown RBP18.55■□□□□ 0.56
TPM1-208ENST00000404484 UPK3AO75631 287 aa18.55■□□□□ 0.56
TPM1-208ENST00000404484 MSR1P21757 451 aa18.55■□□□□ 0.56
TPM1-208ENST00000404484 C3AR1Q16581 482 aa18.55■□□□□ 0.56
TPM1-208ENST00000404484 C22orf42Q6IC83 251 aa18.55■□□□□ 0.56
TPM1-208ENST00000404484 PAMR1Q6UXH9 720 aa18.55■□□□□ 0.56
TPM1-208ENST00000404484 DCXRQ7Z4W1 244 aa18.55■□□□□ 0.56
TPM1-208ENST00000404484 ST7LQ8TDW4 575 aa18.55■□□□□ 0.56
TPM1-208ENST00000404484 GHSRQ92847 366 aa18.55■□□□□ 0.56
TPM1-208ENST00000404484 ZNF775Q96BV0 537 aaPredicted RBP18.55■□□□□ 0.56
TPM1-208ENST00000404484 PGLYRP3Q96LB9 341 aa18.55■□□□□ 0.56
TPM1-208ENST00000404484 TAAR6Q96RI8 345 aa18.55■□□□□ 0.56
TPM1-208ENST00000404484 AMELYQ99218 206 aa18.55■□□□□ 0.56
TPM1-208ENST00000404484 ELOVL3Q9HB03 270 aa18.55■□□□□ 0.56
TPM1-208ENST00000404484 POLEQ07864 2286 aa18.54■□□□□ 0.56
TPM1-208ENST00000404484 SLC22A20A6NK97 555 aa18.54■□□□□ 0.56
TPM1-208ENST00000404484 RPP14O95059 124 aaKnown RBP18.54■□□□□ 0.56
TPM1-208ENST00000404484 YES1P07947 543 aa18.54■□□□□ 0.56
TPM1-208ENST00000404484 SOX6P35712 828 aa18.54■□□□□ 0.56
TPM1-208ENST00000404484 TGFBR1P36897 503 aa18.54■□□□□ 0.56
TPM1-208ENST00000404484 PSMB10P40306 273 aa18.54■□□□□ 0.56
TPM1-208ENST00000404484 ALKBH1Q13686 389 aaKnown RBP18.54■□□□□ 0.56
TPM1-208ENST00000404484 PHYHD1Q5SRE7 291 aa18.54■□□□□ 0.56
TPM1-208ENST00000404484 LRRN1Q6UXK5 716 aa18.54■□□□□ 0.56
TPM1-208ENST00000404484 RHOUQ7L0Q8 258 aa18.54■□□□□ 0.56
TPM1-208ENST00000404484 GALNT11Q8NCW6 608 aa18.54■□□□□ 0.56
TPM1-208ENST00000404484 TRMT61AQ96FX7 289 aaKnown RBP18.54■□□□□ 0.56
TPM1-208ENST00000404484 RBM24Q9BX46 236 aaKnown RBP18.54■□□□□ 0.56
TPM1-208ENST00000404484 HDHD5Q9BXW7 423 aa18.54■□□□□ 0.56
TPM1-208ENST00000404484 LINC00470Q9BZP3 86 aa18.54■□□□□ 0.56
TPM1-208ENST00000404484 RNF167Q9H6Y7 350 aa18.54■□□□□ 0.56
TPM1-208ENST00000404484 GALNT8Q9NY28 637 aa18.54■□□□□ 0.56
TPM1-208ENST00000404484 OR14I1A6ND48 311 aa18.53■□□□□ 0.56
TPM1-208ENST00000404484 CLPXO76031 633 aa18.53■□□□□ 0.56
TPM1-208ENST00000404484 IL1AP01583 271 aa18.53■□□□□ 0.56
TPM1-208ENST00000404484 NPR2P20594 1047 aa18.53■□□□□ 0.56
TPM1-208ENST00000404484 CDAP32320 146 aa18.53■□□□□ 0.56
TPM1-208ENST00000404484 STK11Q15831 433 aa18.53■□□□□ 0.56
TPM1-208ENST00000404484 OTPQ5XKR4 325 aa18.53■□□□□ 0.56
TPM1-208ENST00000404484 FDX2Q6P4F2 183 aa18.53■□□□□ 0.56
TPM1-208ENST00000404484 LINC00346Q8IVM7 164 aa18.53■□□□□ 0.56
TPM1-208ENST00000404484 RNF133Q8WVZ7 376 aa18.53■□□□□ 0.56
TPM1-208ENST00000404484 SLCO5A1Q9H2Y9 848 aa18.53■□□□□ 0.56
TPM1-208ENST00000404484 EMC7Q9NPA0 242 aa18.53■□□□□ 0.56
TPM1-208ENST00000404484 GNLYP22749 145 aa18.52■□□□□ 0.56
TPM1-208ENST00000404484 UQCRFS1P47985 274 aa18.52■□□□□ 0.56
TPM1-208ENST00000404484 MRPS34P82930 218 aaKnown RBP18.52■□□□□ 0.56
TPM1-208ENST00000404484 SGCAQ16586 387 aa18.52■□□□□ 0.56
TPM1-208ENST00000404484 LINC00299Q6ZSB3 139 aa18.52■□□□□ 0.56
TPM1-208ENST00000404484 P4HA3Q7Z4N8 544 aa18.52■□□□□ 0.56
TPM1-208ENST00000404484 ABHD4Q8TB40 342 aa18.52■□□□□ 0.56
TPM1-208ENST00000404484 MED18Q9BUE0 208 aa18.52■□□□□ 0.56
TPM1-208ENST00000404484 GLRX2Q9NS18 164 aa18.52■□□□□ 0.56
TPM1-208ENST00000404484 GDF2Q9UK05 429 aaPredicted RBP18.52■□□□□ 0.56
TPM1-208ENST00000404484 ZNF281Q9Y2X9 895 aa18.52■□□□□ 0.56
TPM1-208ENST00000404484 LRP12Q9Y561 859 aa18.52■□□□□ 0.56
TPM1-208ENST00000404484 A3GALT2U3KPV4 340 aa18.52■□□□□ 0.56
TPM1-208ENST00000404484 COL12A1Q99715 3063 aa18.52■□□□□ 0.56
TPM1-208ENST00000404484 TMEM212A6NML5 194 aa18.51■□□□□ 0.55
TPM1-208ENST00000404484 KRT33AO76009 404 aa18.51■□□□□ 0.55
TPM1-208ENST00000404484 H2BFMP0C1H6 154 aa18.51■□□□□ 0.55
TPM1-208ENST00000404484 YIF1BQ5BJH7 314 aa18.51■□□□□ 0.55
TPM1-208ENST00000404484 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.51■□□□□ 0.55
TPM1-208ENST00000404484 TUSC5Q8IXB3 177 aa18.51■□□□□ 0.55
TPM1-208ENST00000404484 OR2G2Q8NGZ5 317 aa18.51■□□□□ 0.55
TPM1-208ENST00000404484 PHYHIPQ92561 330 aa18.51■□□□□ 0.55
TPM1-208ENST00000404484 SLAMF6Q96DU3 332 aa18.51■□□□□ 0.55
TPM1-208ENST00000404484 DACH2Q96NX9 599 aa18.51■□□□□ 0.55
TPM1-208ENST00000404484 COMMD4Q9H0A8 199 aa18.51■□□□□ 0.55
TPM1-208ENST00000404484 CRLF2Q9HC73 371 aa18.51■□□□□ 0.55
TPM1-208ENST00000404484 LHFPL6Q9Y693 200 aa18.51■□□□□ 0.55
TPM1-208ENST00000404484 ZGRF1Q86YA3 2104 aa18.51■□□□□ 0.55
TPM1-208ENST00000404484 ARPC4-TTLL3A0A0A6YYG9 625 aa18.51■□□□□ 0.55
TPM1-208ENST00000404484 CD8B2A6NJW9 211 aa18.51■□□□□ 0.55
TPM1-208ENST00000404484 LRRTM2O43300 516 aa18.51■□□□□ 0.55
TPM1-208ENST00000404484 GATBO75879 557 aaKnown RBP18.51■□□□□ 0.55
TPM1-208ENST00000404484 CD8BP10966 210 aa18.51■□□□□ 0.55
TPM1-208ENST00000404484 DCTDP32321 178 aa18.51■□□□□ 0.55
TPM1-208ENST00000404484 NTF4P34130 210 aa18.51■□□□□ 0.55
TPM1-208ENST00000404484 OPRL1P41146 370 aa18.51■□□□□ 0.55
TPM1-208ENST00000404484 CCR9P51686 369 aa18.51■□□□□ 0.55
TPM1-208ENST00000404484 MRPL49Q13405 166 aaKnown RBP18.51■□□□□ 0.55
TPM1-208ENST00000404484 SF3B4Q15427 424 aaKnown RBP eCLIP18.51■□□□□ 0.551e-9■■□□□ 12.9
TPM1-208ENST00000404484 CORO6Q6QEF8 472 aa18.51■□□□□ 0.55
TPM1-208ENST00000404484 FAM180AQ6UWF9 173 aa18.51■□□□□ 0.55
TPM1-208ENST00000404484 TMEM91Q6ZNR0 172 aa18.51■□□□□ 0.55
TPM1-208ENST00000404484 OR5AK2Q8NH90 309 aa18.51■□□□□ 0.55
TPM1-208ENST00000404484 NIPAL2Q9H841 368 aa18.51■□□□□ 0.55
TPM1-208ENST00000404484 CALHM2Q9HA72 323 aa18.51■□□□□ 0.55
TPM1-208ENST00000404484 ASH2LQ9UBL3 628 aa18.51■□□□□ 0.55
TPM1-208ENST00000404484 ZNF878C9JN71 531 aa18.5■□□□□ 0.55
TPM1-208ENST00000404484 NANOS3P60323 173 aaKnown RBP18.5■□□□□ 0.55
TPM1-208ENST00000404484 ZNF829Q3KNS6 432 aaPredicted RBP18.5■□□□□ 0.55
TPM1-208ENST00000404484 ACSM3Q53FZ2 586 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms